| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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The map label for this gene is dgk
Identifier: 13357642
GI number: 13357642
Start: 104864
End: 105562
Strand: Reverse
Name: dgk
Synonym: UU086
Alternate gene names: NA
Gene position: 105562-104864 (Counterclockwise)
Preceding gene: 13357652
Following gene: 13357634
Centisome position: 14.04
GC content: 26.47
Gene sequence:
>699_bases ATGTCAGATAAAAAATTAGATTTTTTAACACCATCTTTTAAAAAAAATAGGGTTTCTAATTCTATTGCAATAGGTGGTAT GATTGCTTTTGGTAAATCTACTTTAGCACAAGCTTTACACGAAAAATATCAACCATCAAATGTGGTTTATGAAATGGTTG AGGGTGATAAATTAATGGATTTATTACTAGCAAAAATGTATGAACGTGAGAATAACGTTCTTTTTGGGTCTTTATTTCAA CTATATTTTGTTTTAAATCGTTTTGCAAACTACAAAAATAATTGTAACCGTAAAAGTTTAACAATTTTTGATCGTAGTAT TTTTGAAGATTGATTATTTGCGCATGCAAATATTGATAAACCTTCTGTATTTTCATATTATGATGGATTGTGACAAGGAG TTTGCAAAGAATTAATCTATGAACATGGAGTTCCAAAACTTTACGTCATTTTAGATGGTGATTGAGAGTTATTCAAAGAA AGAATTTTTAAAAGAAACCGGAAAGTTGAAATTGATAATTTTTCAATTAATGAAACATACTTCAAACGTTTATTAGAAAT GTACAAAAATTATATGGTTAATGTTTGTAAAGATTTTGGTATTAACTATGTTGTTTTAGATGCAAACAATTCTGTTGAAC AAAACGTTGATGAAGTTACAAAAATATTACAAAAGTTAGAAAATGAGCAAGACAAATAA
Upstream 100 bases:
>100_bases TAATAATAAAAAAATTATTTTTTTAATTTTATTTTTTAGTTTTTTTATTTGTATAATCTAAAATATGAACTAAAAAAATA TTTATGATAAGGGTTAAAAT
Downstream 100 bases:
>100_bases TAAATCAAAAATTTGATTGATCGTTGGTATTATTTTTGCTATTAGTTTGTCGTTTGGTATTTGAGGAATTTCAAAAGCAT TACGCAACGACGAGCAAACA
Product: deoxyguanosine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MSDKKLDFLTPSFKKNRVSNSIAIGGMIAFGKSTLAQALHEKYQPSNVVYEMVEGDKLMDLLLAKMYERENNVLFGSLFQ LYFVLNRFANYKNNCNRKSLTIFDRSIFEDWLFAHANIDKPSVFSYYDGLWQGVCKELIYEHGVPKLYVILDGDWELFKE RIFKRNRKVEIDNFSINETYFKRLLEMYKNYMVNVCKDFGINYVVLDANNSVEQNVDEVTKILQKLENEQDK
Sequences:
>Translated_232_residues MSDKKLDFLTPSFKKNRVSNSIAIGGMIAFGKSTLAQALHEKYQPSNVVYEMVEGDKLMDLLLAKMYERENNVLFGSLFQ LYFVLNRFANYKNNCNRKSLTIFDRSIFED*LFAHANIDKPSVFSYYDGL*QGVCKELIYEHGVPKLYVILDGD*ELFKE RIFKRNRKVEIDNFSINETYFKRLLEMYKNYMVNVCKDFGINYVVLDANNSVEQNVDEVTKILQKLENEQDK >Mature_231_residues SDKKLDFLTPSFKKNRVSNSIAIGGMIAFGKSTLAQALHEKYQPSNVVYEMVEGDKLMDLLLAKMYERENNVLFGSLFQL YFVLNRFANYKNNCNRKSLTIFDRSIFED*LFAHANIDKPSVFSYYDGL*QGVCKELIYEHGVPKLYVILDGD*ELFKER IFKRNRKVEIDNFSINETYFKRLLEMYKNYMVNVCKDFGINYVVLDANNSVEQNVDEVTKILQKLENEQDK
Specific function: Unknown
COG id: COG1428
COG function: function code F; Deoxynucleoside kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002624 [H]
Pfam domain/function: PF01712 dNK [H]
EC number: NA
Molecular weight: Translated: 26727; Mature: 26596
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKKLDFLTPSFKKNRVSNSIAIGGMIAFGKSTLAQALHEKYQPSNVVYEMVEGDKLMD CCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHH LLLAKMYERENNVLFGSLFQLYFVLNRFANYKNNCNRKSLTIFDRSIFEDLFAHANIDKP HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC SVFSYYDGLQGVCKELIYEHGVPKLYVILDGDELFKERIFKRNRKVEIDNFSINETYFKR HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCEEECCCCCCHHHHHH LLEMYKNYMVNVCKDFGINYVVLDANNSVEQNVDEVTKILQKLENEQDK HHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SDKKLDFLTPSFKKNRVSNSIAIGGMIAFGKSTLAQALHEKYQPSNVVYEMVEGDKLMD CCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHH LLLAKMYERENNVLFGSLFQLYFVLNRFANYKNNCNRKSLTIFDRSIFEDLFAHANIDKP HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC SVFSYYDGLQGVCKELIYEHGVPKLYVILDGDELFKERIFKRNRKVEIDNFSINETYFKR HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCEEECCCCCCHHHHHH LLEMYKNYMVNVCKDFGINYVVLDANNSVEQNVDEVTKILQKLENEQDK HHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8948633 [H]