| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13357602
GI number: 13357602
Start: 52771
End: 55146
Strand: Direct
Name: Not Available
Synonym: UU046
Alternate gene names: NA
Gene position: 52771-55146 (Clockwise)
Preceding gene: 13357601
Following gene: 13357603
Centisome position: 7.02
GC content: 31.31
Gene sequence:
>2376_bases ATGAAATTTATTAAACGTAAAACAAAATTATTAACGATTACAATTGGTGCAGTTGCTGTGAGTTCAATTTTATTAGGAGG AATTTTTTATGGTACAAGTCAAAAAAGTCCTTCAAGTTTTGGTATTGCTTCTATTGATCAAAAAGAAAATTTTATTAATA AAGACAATTTAGATTACCAAAAAGCAAGACCATCAATTAAAGATAATAACTTAAAAGAAATTCCCAAACCAAAACCTCAG CCAAAACCAGAACCACAACCAACACCATTTCCAGATCCCATCCCAACACCTCCAAAAAAAGAAGAGTTAAAAAAACCAGA GATTAAACCAGAAGAGCCTAAAAAGCCTGAAATTAAACCAGAACCAATTCCTAAACCAAAACCTCAGCCTATTCCTCAAC CAACACCTCCTGTTGAAACTAAACCAAAAGAAGAATTATTACCACCAAGCCCACCACCTCCAAAAGAAGAACCAAAACCA GAACCAGATCCACAACCACAACCACAACAAATTCCTAACCAAAGTACTGTTAGAAAAATTGAATTGAATGGTGTTTTAGT GGACGCTGAAGTTGAAGTTCCACCCCCTCGTCAAACTTTTAAATATGATCAGGATAATGGATTATCAAATCTTAATCCCT ATACAAATATAAGTGTTGGGAAAATTAAAAAAGTTTTTGTAACAGATGAGTTGCGGCACAAATCAGCAGATTTAGTGCGC GGGAATTTAAAGCGTGGCGATTATCAAAGTTTAGTTAAAGATTTATTAGATCCAAATATAAAACCAGAGGAAATTGATAG TTATATCGCAATGGTTGATAAAAGTGGATATCACGCTAAATTATGAAGTAAATTTAAAAAACTATTTGATACAGACAATG TTGTTAATTTTCTGAATGAACAAGGTAAAAAAGAATATCCTAATATGAAAACAAAATTTGTTTCTGATGCGCACAAGTAT GCTTGATTATATGCTCATTTAGATTTTTCAAAATTCACTAAACTTTCAGCCAATTCTGAAAAGTATTTACAAGAAGGTTT AACGCCTGATCCAGATAATTCATATGTTAATGAAAACGGCGAATTAGACTCATATGCTTATTCACCTGCTAAAGAATATA ATACAGTAACAAGCCGTTTAGCAAATGATAATGCTAACCGAAGGGTGTTTGGGTATAACGAATGATACAATCGTAGTCCA AATGGTTTAGCTAATGGTGATTATCCTGGTTGAAATAAATCAGATGCAACAGCTGAGTTCAAACAGTATGGCATTAAAGA TGGTGATGGTATTAAAGTTTATAAACTAGAGCGCCAAAAACCACAAGAAGGTAAATTAAATACTGGATATATTGTTGATA TTGATGCTGATAATCCTGATGGATACCAAAAAACAAAAGAATTAATTCAAAAATTAAATAATCAAAACAAAAAAATTACA GGATATCGAATTCGTAACATGGGGAAATCAGATTCAGGACAAAAGTTCTCTGATATTCTAAAAGCCTTACCAAATGAATT GCCATTGCTTGAATTGTTCTTTTCTGCTGGTTCACATAATACGTCAGCACTTTCTGCTCTTGAAACTAAACATATTAAAG AACTTGGGTTGTATACATTAGGTAATTCATTATTAGATGAATGATCAATTAATCCAAATGCGCTTCGAAAAGTAGAATGA ATTAATTCTAATGATTATAATGTTTCGTCAGAATATAAACAAGGATCAGATATTGCTACACGAATTACTTTTGATACTCT TTCTTTTGATAAAAATGATTTCAATGATAATGCAAATGATCTTCGAACAAAATTAAAACGTATTAATGATGGATTACGAA TGGTTTATTGAACAAGAAATAATGAACCATTCTTTCAAGGTGGATTTGGTCCAGGATTAGATCCTGATCATAAAGAGGTG GGAAATAGTTATCCCCAAGGTTTAGACTTTAGTCGTGTCCCTCAAATTCGCTCATTACGGGGTTTAATATTTAAAGACGA ACAAAAAGCTTCAAACAATCGTGAACGTAAATTAAGAAGAGTTAATTTCTTTAATGATAAAGAAAATTATGAAATGTCAA TTAATGATTTAAATGAAGCTGGTTTTAGTGAACATATTGTGACTAATGAACCAATGCCTCCTAAAAGTAAAATTACTTTT AGTAATGGTAATGCTACAAAACGTATTTACATTAAAGGCAATGGTAGTCTAACTGCAAGTGGTATTCAAAATTTAGCTAC ATTATTTAATCTAGCAGAAAGTTTAGATTCTAAATCTGTTGTTGTTGATTCTAATAATTCAGAATTAAAGTCACAATTAG AAGGTTTAGGATATAAAGTAAGTGATGCTTCTGACGCTAACTATATTGATATTTAA
Upstream 100 bases:
>100_bases AACAGCATTATTTCCTGATGGATTCGATAAGATTCCTGATGAATTCAAATTTAATAATAATTAAAAATAAATTATCTTTA ATTGAAAGGATTGTTGGTAT
Downstream 100 bases:
>100_bases TAGAAGGAATTATTATGAAAATTAAAAAACTTATTGCAAGCGTTAGTATAATCACACCAATTGTGTTTGTTTCAGCTTTA GCAGCGTCTTGTGTTAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 791; Mature: 791
Protein sequence:
>791_residues MKFIKRKTKLLTITIGAVAVSSILLGGIFYGTSQKSPSSFGIASIDQKENFINKDNLDYQKARPSIKDNNLKEIPKPKPQ PKPEPQPTPFPDPIPTPPKKEELKKPEIKPEEPKKPEIKPEPIPKPKPQPIPQPTPPVETKPKEELLPPSPPPPKEEPKP EPDPQPQPQQIPNQSTVRKIELNGVLVDAEVEVPPPRQTFKYDQDNGLSNLNPYTNISVGKIKKVFVTDELRHKSADLVR GNLKRGDYQSLVKDLLDPNIKPEEIDSYIAMVDKSGYHAKLWSKFKKLFDTDNVVNFLNEQGKKEYPNMKTKFVSDAHKY AWLYAHLDFSKFTKLSANSEKYLQEGLTPDPDNSYVNENGELDSYAYSPAKEYNTVTSRLANDNANRRVFGYNEWYNRSP NGLANGDYPGWNKSDATAEFKQYGIKDGDGIKVYKLERQKPQEGKLNTGYIVDIDADNPDGYQKTKELIQKLNNQNKKIT GYRIRNMGKSDSGQKFSDILKALPNELPLLELFFSAGSHNTSALSALETKHIKELGLYTLGNSLLDEWSINPNALRKVEW INSNDYNVSSEYKQGSDIATRITFDTLSFDKNDFNDNANDLRTKLKRINDGLRMVYWTRNNEPFFQGGFGPGLDPDHKEV GNSYPQGLDFSRVPQIRSLRGLIFKDEQKASNNRERKLRRVNFFNDKENYEMSINDLNEAGFSEHIVTNEPMPPKSKITF SNGNATKRIYIKGNGSLTASGIQNLATLFNLAESLDSKSVVVDSNNSELKSQLEGLGYKVSDASDANYIDI
Sequences:
>Translated_791_residues MKFIKRKTKLLTITIGAVAVSSILLGGIFYGTSQKSPSSFGIASIDQKENFINKDNLDYQKARPSIKDNNLKEIPKPKPQ PKPEPQPTPFPDPIPTPPKKEELKKPEIKPEEPKKPEIKPEPIPKPKPQPIPQPTPPVETKPKEELLPPSPPPPKEEPKP EPDPQPQPQQIPNQSTVRKIELNGVLVDAEVEVPPPRQTFKYDQDNGLSNLNPYTNISVGKIKKVFVTDELRHKSADLVR GNLKRGDYQSLVKDLLDPNIKPEEIDSYIAMVDKSGYHAKL*SKFKKLFDTDNVVNFLNEQGKKEYPNMKTKFVSDAHKY A*LYAHLDFSKFTKLSANSEKYLQEGLTPDPDNSYVNENGELDSYAYSPAKEYNTVTSRLANDNANRRVFGYNE*YNRSP NGLANGDYPG*NKSDATAEFKQYGIKDGDGIKVYKLERQKPQEGKLNTGYIVDIDADNPDGYQKTKELIQKLNNQNKKIT GYRIRNMGKSDSGQKFSDILKALPNELPLLELFFSAGSHNTSALSALETKHIKELGLYTLGNSLLDE*SINPNALRKVE* INSNDYNVSSEYKQGSDIATRITFDTLSFDKNDFNDNANDLRTKLKRINDGLRMVY*TRNNEPFFQGGFGPGLDPDHKEV GNSYPQGLDFSRVPQIRSLRGLIFKDEQKASNNRERKLRRVNFFNDKENYEMSINDLNEAGFSEHIVTNEPMPPKSKITF SNGNATKRIYIKGNGSLTASGIQNLATLFNLAESLDSKSVVVDSNNSELKSQLEGLGYKVSDASDANYIDI >Mature_791_residues MKFIKRKTKLLTITIGAVAVSSILLGGIFYGTSQKSPSSFGIASIDQKENFINKDNLDYQKARPSIKDNNLKEIPKPKPQ PKPEPQPTPFPDPIPTPPKKEELKKPEIKPEEPKKPEIKPEPIPKPKPQPIPQPTPPVETKPKEELLPPSPPPPKEEPKP EPDPQPQPQQIPNQSTVRKIELNGVLVDAEVEVPPPRQTFKYDQDNGLSNLNPYTNISVGKIKKVFVTDELRHKSADLVR GNLKRGDYQSLVKDLLDPNIKPEEIDSYIAMVDKSGYHAKL*SKFKKLFDTDNVVNFLNEQGKKEYPNMKTKFVSDAHKY A*LYAHLDFSKFTKLSANSEKYLQEGLTPDPDNSYVNENGELDSYAYSPAKEYNTVTSRLANDNANRRVFGYNE*YNRSP NGLANGDYPG*NKSDATAEFKQYGIKDGDGIKVYKLERQKPQEGKLNTGYIVDIDADNPDGYQKTKELIQKLNNQNKKIT GYRIRNMGKSDSGQKFSDILKALPNELPLLELFFSAGSHNTSALSALETKHIKELGLYTLGNSLLDE*SINPNALRKVE* INSNDYNVSSEYKQGSDIATRITFDTLSFDKNDFNDNANDLRTKLKRINDGLRMVY*TRNNEPFFQGGFGPGLDPDHKEV GNSYPQGLDFSRVPQIRSLRGLIFKDEQKASNNRERKLRRVNFFNDKENYEMSINDLNEAGFSEHIVTNEPMPPKSKITF SNGNATKRIYIKGNGSLTASGIQNLATLFNLAESLDSKSVVVDSNNSELKSQLEGLGYKVSDASDANYIDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To U.parvum UU044 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87959; Mature: 87959
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFIKRKTKLLTITIGAVAVSSILLGGIFYGTSQKSPSSFGIASIDQKENFINKDNLDYQ CCCHHCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHCCCCCCCCHH KARPSIKDNNLKEIPKPKPQPKPEPQPTPFPDPIPTPPKKEELKKPEIKPEEPKKPEIKP HCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC EPIPKPKPQPIPQPTPPVETKPKEELLPPSPPPPKEEPKPEPDPQPQPQQIPNQSTVRKI CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHEEEE ELNGVLVDAEVEVPPPRQTFKYDQDNGLSNLNPYTNISVGKIKKVFVTDELRHKSADLVR EECEEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCHHHEEEEEECHHHHHHHHHHHH GNLKRGDYQSLVKDLLDPNIKPEEIDSYIAMVDKSGYHAKLSKFKKLFDTDNVVNFLNEQ CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHC GKKEYPNMKTKFVSDAHKYALYAHLDFSKFTKLSANSEKYLQEGLTPDPDNSYVNENGEL CCCCCCCHHHHHHHHHHEEEEEEEECHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCC DSYAYSPAKEYNTVTSRLANDNANRRVFGYNEYNRSPNGLANGDYPGNKSDATAEFKQYG CCCCCCCHHHHHHHHHHHHCCCCCCEEECCHHCCCCCCCCCCCCCCCCCCCHHHHHHHCC IKDGDGIKVYKLERQKPQEGKLNTGYIVDIDADNPDGYQKTKELIQKLNNQNKKITGYRI CCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEE RNMGKSDSGQKFSDILKALPNELPLLELFFSAGSHNTSALSALETKHIKELGLYTLGNSL ECCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LDESINPNALRKVEINSNDYNVSSEYKQGSDIATRITFDTLSFDKNDFNDNANDLRTKLK HHCCCCCCCEEEEEECCCCCCCCHHHCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHH RINDGLRMVYTRNNEPFFQGGFGPGLDPDHKEVGNSYPQGLDFSRVPQIRSLRGLIFKDE HHCCCEEEEEECCCCCEEECCCCCCCCCCHHHHCCCCCCCCCHHHCCHHHHHHCCEEECH QKASNNRERKLRRVNFFNDKENYEMSINDLNEAGFSEHIVTNEPMPPKSKITFSNGNATK HHHCCCHHHHHHHHCCCCCCCCCEEECCHHCCCCCCCCCCCCCCCCCCCEEEECCCCCEE RIYIKGNGSLTASGIQNLATLFNLAESLDSKSVVVDSNNSELKSQLEGLGYKVSDASDAN EEEEEECCCEEHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCEEECCCCCCC YIDI CCCC >Mature Secondary Structure MKFIKRKTKLLTITIGAVAVSSILLGGIFYGTSQKSPSSFGIASIDQKENFINKDNLDYQ CCCHHCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHCCCCCCCCHH KARPSIKDNNLKEIPKPKPQPKPEPQPTPFPDPIPTPPKKEELKKPEIKPEEPKKPEIKP HCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC EPIPKPKPQPIPQPTPPVETKPKEELLPPSPPPPKEEPKPEPDPQPQPQQIPNQSTVRKI CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHEEEE ELNGVLVDAEVEVPPPRQTFKYDQDNGLSNLNPYTNISVGKIKKVFVTDELRHKSADLVR EECEEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCHHHEEEEEECHHHHHHHHHHHH GNLKRGDYQSLVKDLLDPNIKPEEIDSYIAMVDKSGYHAKLSKFKKLFDTDNVVNFLNEQ CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHC GKKEYPNMKTKFVSDAHKYALYAHLDFSKFTKLSANSEKYLQEGLTPDPDNSYVNENGEL CCCCCCCHHHHHHHHHHEEEEEEEECHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCC DSYAYSPAKEYNTVTSRLANDNANRRVFGYNEYNRSPNGLANGDYPGNKSDATAEFKQYG CCCCCCCHHHHHHHHHHHHCCCCCCEEECCHHCCCCCCCCCCCCCCCCCCCHHHHHHHCC IKDGDGIKVYKLERQKPQEGKLNTGYIVDIDADNPDGYQKTKELIQKLNNQNKKITGYRI CCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEE RNMGKSDSGQKFSDILKALPNELPLLELFFSAGSHNTSALSALETKHIKELGLYTLGNSL ECCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LDESINPNALRKVEINSNDYNVSSEYKQGSDIATRITFDTLSFDKNDFNDNANDLRTKLK HHCCCCCCCEEEEEECCCCCCCCHHHCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHH RINDGLRMVYTRNNEPFFQGGFGPGLDPDHKEVGNSYPQGLDFSRVPQIRSLRGLIFKDE HHCCCEEEEEECCCCCEEECCCCCCCCCCHHHHCCCCCCCCCHHHCCHHHHHHCCEEECH QKASNNRERKLRRVNFFNDKENYEMSINDLNEAGFSEHIVTNEPMPPKSKITFSNGNATK HHHCCCHHHHHHHHCCCCCCCCCEEECCHHCCCCCCCCCCCCCCCCCCCEEEECCCCCEE RIYIKGNGSLTASGIQNLATLFNLAESLDSKSVVVDSNNSELKSQLEGLGYKVSDASDAN EEEEEECCCEEHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCEEECCCCCCC YIDI CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11048724 [H]