| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13357591
GI number: 13357591
Start: 37719
End: 38477
Strand: Reverse
Name: Not Available
Synonym: UU035
Alternate gene names: NA
Gene position: 38477-37719 (Counterclockwise)
Preceding gene: 13357592
Following gene: 13357590
Centisome position: 5.12
GC content: 22.92
Gene sequence:
>759_bases ATGAGGAAATTTAATAAAATGTTGAGTAACAAAAAATTTTTAGATTTAGATATTATAAAGGAATCTTTTGATAATTATTT GAGTGTTGGAACGTCTAGAAGTACTAAAAAATTAAAAACATTACATGGGAGTATAGCAAAAGATTTAGAAGAATTGTTAG GCAAAGAATACAATATTAAATCCCAAGGTTATAGAGATGATAAAGAAGAATGTATTGATGGTAGATATTACAACAAAAAA GTTGATATAACAATTAAAAATAATGGAAAATCAATTGCTGGACTAGCAATTAAATTTGTTATGAGTAATTATTCTCAAAA TAGTAATAATTATTTTGAGAATATGTTAGGCGAAACAGCTAATTTACGATCTAATTCAGTTCCTTATTTTCAAATTTTTA TAATTTTTGATAAAGTTCCATACTATAAAAGTGATGGTGTATTACAAAAATATGATAATATTTCAAACCACAATTTGGAA AAATATTTAAAATTATCAGATGATGACCCTAAAGTTTATTTTCATACACCAGATAAAACGCTCTTCATTTTACTTAGTTT GAAAGAAATTAGTGAGGAAATTAAAAATAAAAAAGATTACATAAGATGTTATAAAGAAATTATGAATGATGAAGACTTAC TAAGTTATTCAAACAAAATCGATGATTTATTTGGTAATTCTATAATATTAAATAATTATGAAGATTTTATCAAAAGAATG TGCGCTCTTATTATAGGCTATCAAAAAATAAAAACATAA
Upstream 100 bases:
>100_bases TTTGGCCTTTATATTTCTTTATTAGGAAAATATAAAAATGGTGGTTATTATACTTTTTCATCGAAAGATGTAAAAAAATA CTTGGATTACAAATTAAAAA
Downstream 100 bases:
>100_bases TCAATATAAATTCATACTTTTTTAAAACCTTAATGCAAAATTATATAAGTATTATAAAATAACATATTATTTTAAATTTT AATGGAGGTTAAAGTAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MRKFNKMLSNKKFLDLDIIKESFDNYLSVGTSRSTKKLKTLHGSIAKDLEELLGKEYNIKSQGYRDDKEECIDGRYYNKK VDITIKNNGKSIAGLAIKFVMSNYSQNSNNYFENMLGETANLRSNSVPYFQIFIIFDKVPYYKSDGVLQKYDNISNHNLE KYLKLSDDDPKVYFHTPDKTLFILLSLKEISEEIKNKKDYIRCYKEIMNDEDLLSYSNKIDDLFGNSIILNNYEDFIKRM CALIIGYQKIKT
Sequences:
>Translated_252_residues MRKFNKMLSNKKFLDLDIIKESFDNYLSVGTSRSTKKLKTLHGSIAKDLEELLGKEYNIKSQGYRDDKEECIDGRYYNKK VDITIKNNGKSIAGLAIKFVMSNYSQNSNNYFENMLGETANLRSNSVPYFQIFIIFDKVPYYKSDGVLQKYDNISNHNLE KYLKLSDDDPKVYFHTPDKTLFILLSLKEISEEIKNKKDYIRCYKEIMNDEDLLSYSNKIDDLFGNSIILNNYEDFIKRM CALIIGYQKIKT >Mature_252_residues MRKFNKMLSNKKFLDLDIIKESFDNYLSVGTSRSTKKLKTLHGSIAKDLEELLGKEYNIKSQGYRDDKEECIDGRYYNKK VDITIKNNGKSIAGLAIKFVMSNYSQNSNNYFENMLGETANLRSNSVPYFQIFIIFDKVPYYKSDGVLQKYDNISNHNLE KYLKLSDDDPKVYFHTPDKTLFILLSLKEISEEIKNKKDYIRCYKEIMNDEDLLSYSNKIDDLFGNSIILNNYEDFIKRM CALIIGYQKIKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y035_UREPA (Q9PRB0)
Other databases:
- EMBL: AF222894 - RefSeq: NP_077865.1 - GeneID: 876395 - GenomeReviews: AF222894_GR - KEGG: uur:UU035 - HOGENOM: HBG568733 - OMA: KEIMNDE - ProtClustDB: CLSK395236 - BioCyc: UURE95667:UU035-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29532; Mature: 29532
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKFNKMLSNKKFLDLDIIKESFDNYLSVGTSRSTKKLKTLHGSIAKDLEELLGKEYNIK CCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC SQGYRDDKEECIDGRYYNKKVDITIKNNGKSIAGLAIKFVMSNYSQNSNNYFENMLGETA CCCCCCCHHHHHCCCEECCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCC NLRSNSVPYFQIFIIFDKVPYYKSDGVLQKYDNISNHNLEKYLKLSDDDPKVYFHTPDKT CCCCCCCCEEEEEEEEECCCCCCCCCHHHHHCCCCCCCHHHHHEECCCCCEEEEECCCCE LFILLSLKEISEEIKNKKDYIRCYKEIMNDEDLLSYSNKIDDLFGNSIILNNYEDFIKRM EEEEEEHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCHHHHHHHH CALIIGYQKIKT HHHHHHHHHHCC >Mature Secondary Structure MRKFNKMLSNKKFLDLDIIKESFDNYLSVGTSRSTKKLKTLHGSIAKDLEELLGKEYNIK CCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC SQGYRDDKEECIDGRYYNKKVDITIKNNGKSIAGLAIKFVMSNYSQNSNNYFENMLGETA CCCCCCCHHHHHCCCEECCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCC NLRSNSVPYFQIFIIFDKVPYYKSDGVLQKYDNISNHNLEKYLKLSDDDPKVYFHTPDKT CCCCCCCCEEEEEEEEECCCCCCCCCHHHHHCCCCCCCHHHHHEECCCCCEEEEECCCCE LFILLSLKEISEEIKNKKDYIRCYKEIMNDEDLLSYSNKIDDLFGNSIILNNYEDFIKRM EEEEEEHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCHHHHHHHH CALIIGYQKIKT HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11048724