Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126700974

Identifier: 126700974

GI number: 126700974

Start: 3918548

End: 3919216

Strand: Direct

Name: 126700974

Synonym: CD3354

Alternate gene names: NA

Gene position: 3918548-3919216 (Clockwise)

Preceding gene: 126700968

Following gene: 126700976

Centisome position: 91.34

GC content: 25.26

Gene sequence:

>669_bases
ATGTTAGAGGTATCACATAAAGTTAAAGAAATTTATCCCAATATTAAATTTGGAGTTATGGTTATAAATATTACACATTC
AAAACCTAATAAAGAAAATTTTTTAGTTCTTAAAAACTCTACAATTAAAAATATTATAGAACAACACCCAGAATACAATC
GCAAAGAAAAAATTAAAACAGAGCCTGTTTCAAGTTATATAAAGTATTATAAAAAATTCAAGAAAACTTACCCTGTATTG
CTTCAATTAGAATCTATTCTATTAAAATCAAAAGGTATCCCAGATGTAGGTGTAACAATTGAGTCAATGTTTTTAGCAGA
ATTGAAAAATCTTCTTCTAACAGCAGGTCATGACCTTGATAAAATGGAATTACCTTTGAAAATAGAATTAGCAAATGGAA
GTGAACATTTTTATGGTATAGGTGGTAAAGAACATATTTTAACAAAAGATGATTTATTTTTATCAGATAATATTGGTATA
TTATCTAGTATTCTTAATGGCCCTGATAATCGAACAGCTATAACAAAAGATACTAAAAATATTATGTATTTTGTATATGG
ACCTGATAAAATATCAGAAAAGCAAATTCAAGACCATTTAAATGACATAAAACACTATATTTCAAGTGCTTTTCCAGATT
TAAAAGTTAATTCAATTGATATATTTTAG

Upstream 100 bases:

>100_bases
AAGTGGTTCTATAAAATTACTATAAAAATGGAACTATAAAATCCACTTTTAATTTGCTAAGATTATATCATAAAATATAA
AATAAAAAGGAGTCTATATT

Downstream 100 bases:

>100_bases
TTAATATATTAAAATCCTCATAAATATTTTGAATAAATAAATTAGTGAAGTATACATTCTAGTTAAACTAGATATACTTC
ACTAAAATTAATTATATGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MLEVSHKVKEIYPNIKFGVMVINITHSKPNKENFLVLKNSTIKNIIEQHPEYNRKEKIKTEPVSSYIKYYKKFKKTYPVL
LQLESILLKSKGIPDVGVTIESMFLAELKNLLLTAGHDLDKMELPLKIELANGSEHFYGIGGKEHILTKDDLFLSDNIGI
LSSILNGPDNRTAITKDTKNIMYFVYGPDKISEKQIQDHLNDIKHYISSAFPDLKVNSIDIF

Sequences:

>Translated_222_residues
MLEVSHKVKEIYPNIKFGVMVINITHSKPNKENFLVLKNSTIKNIIEQHPEYNRKEKIKTEPVSSYIKYYKKFKKTYPVL
LQLESILLKSKGIPDVGVTIESMFLAELKNLLLTAGHDLDKMELPLKIELANGSEHFYGIGGKEHILTKDDLFLSDNIGI
LSSILNGPDNRTAITKDTKNIMYFVYGPDKISEKQIQDHLNDIKHYISSAFPDLKVNSIDIF
>Mature_222_residues
MLEVSHKVKEIYPNIKFGVMVINITHSKPNKENFLVLKNSTIKNIIEQHPEYNRKEKIKTEPVSSYIKYYKKFKKTYPVL
LQLESILLKSKGIPDVGVTIESMFLAELKNLLLTAGHDLDKMELPLKIELANGSEHFYGIGGKEHILTKDDLFLSDNIGI
LSSILNGPDNRTAITKDTKNIMYFVYGPDKISEKQIQDHLNDIKHYISSAFPDLKVNSIDIF

Specific function: Unknown

COG id: COG3382

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25393; Mature: 25393

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEVSHKVKEIYPNIKFGVMVINITHSKPNKENFLVLKNSTIKNIIEQHPEYNRKEKIKT
CCCCHHHHHHHCCCCEEEEEEEEEECCCCCCCCEEEEECCHHHHHHHHCCCCCCHHHCCC
EPVSSYIKYYKKFKKTYPVLLQLESILLKSKGIPDVGVTIESMFLAELKNLLLTAGHDLD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
KMELPLKIELANGSEHFYGIGGKEHILTKDDLFLSDNIGILSSILNGPDNRTAITKDTKN
CCCCCEEEEEECCCCEEEECCCCCEEEECCCEEEECCHHHHHHHHCCCCCCCEEEECCCE
IMYFVYGPDKISEKQIQDHLNDIKHYISSAFPDLKVNSIDIF
EEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECC
>Mature Secondary Structure
MLEVSHKVKEIYPNIKFGVMVINITHSKPNKENFLVLKNSTIKNIIEQHPEYNRKEKIKT
CCCCHHHHHHHCCCCEEEEEEEEEECCCCCCCCEEEEECCHHHHHHHHCCCCCCHHHCCC
EPVSSYIKYYKKFKKTYPVLLQLESILLKSKGIPDVGVTIESMFLAELKNLLLTAGHDLD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
KMELPLKIELANGSEHFYGIGGKEHILTKDDLFLSDNIGILSSILNGPDNRTAITKDTKN
CCCCCEEEEEECCCCEEEECCCCCEEEECCCEEEECCHHHHHHHHCCCCCCCEEEECCCE
IMYFVYGPDKISEKQIQDHLNDIKHYISSAFPDLKVNSIDIF
EEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA