| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is feoB3 [H]
Identifier: 126700893
GI number: 126700893
Start: 3831876
End: 3833822
Strand: Direct
Name: feoB3 [H]
Synonym: CD3274
Alternate gene names: 126700893
Gene position: 3831876-3833822 (Clockwise)
Preceding gene: 126700892
Following gene: 126700918
Centisome position: 89.32
GC content: 31.23
Gene sequence:
>1947_bases GTGATTAATGTAGCATTATTAGGAAACCCAAATGTCGGTAAAACTACTGTTTTTAATCTACTTACAGGTTCAAATCAATA TGTAGGTAACTGGCCTGGTGTTACTATAGAAAAAAAAGAAGGATTTCTTGGAAAAGAGATAAAGGTTGTCGATTTACCTG GTATATATGCAATGGATACTTTCTCAAATGAAGAAAAGGTTTCTAAATCATATTTAGAAAATGAAGATGTTGATGTAATA GTAAATGTAGTTGATGCTTCTAATTTATCAAGAAACCTTTACTTAACAACTCAACTTATGCAATTTAACAAGCCTATAGT TATATTGCTTAATATGTTAGACATTGCAGAATCTAAAGGAGTTAATATAGATGCCAAAAAATTAAGTGAAGAACTTGGAG TAATTGTTGTTCCAATTATAGCAAAAAAGAAAAATGGTGTTGATAGGATAGAAGAAGAGATTAAGGGAGCTACGCAAAAA GCTTTTATATATCAGAAAAACTTTGGAAGTGAAACAGAAACATATAAAAAATTAGAATCCATTTTATCAAGATGTACAAA AACTACATATACACAAAAGAAATCTATCAGTGATAAGATAGACAATATAGTCTTGAATCCTATATTAGCATATCCAATAT TTATTGGTGTATTGTTCCTCTTATTTAAATTTACCTTTGACTGGGTCGGAGGTCCACTACAAGAGGGATTTGCTAGTCTT ATAGAGGCTTATATTTCTGCACCTGTTAGTGATATGTTATCTAACTCTAGCCCATGGTTTAAATCACTTATAGTTGATGG AATAATTGGAGGTGTTGGTGGTACTTTACCATTCTTCCCTTTAATATTTACATTATTCTTTGGTATATCGTTGTTTGAAG ATAGTGGATATATGTCAAGAACAGCATTTTTAATGGATAAAGTTATGAGAAAGGTTGGTCTATCTGGTAAAGCTTTTATA CCTATAGTTATGGGTATGGGATGTTCTTCTCCAGCTATAATGGCAACTAGAACATTGGAAAGCGAAAAAGATAGAAGAGT TACAGCTCTTATTGCACCACTTATGACTTGTGGAGCAAAGCTACCTATATATGCACTATTTGTAGCTATATTCTTTCCAC ATAATGCTGCTTTAGTAACTACATCACTGTATTTGGTGGGTATAGTTATGGCAATTGTAGTTGCATTATTCTTAAATAAA ACAGCCTTTAAAACAGAGGCTGAACCATTTATATTAGAATTACCAGAATATAGAATCCCTACTATAGATGCACTTATTAA AAATACTTGGAATAAATCAAAAGGTTTCTTGATAAGAGTTGTTACTGTCATGTTTGCAATGTCAGTCGTAATTTGGGGAC TTTCTTCATTCAATGTTTTTGGATATACAGAAGATATAAATGTAAGCTTCTTGGCTACTCTAGGTCATATTATATCTCCT ATATTCAAACCTCTTGGTTTTGATGATTGGAGAACTTCAGTTGCTATTTTAAGTGGTCTTGGAGCAAAAGAAATCGTAGT AAACTCTTTAAATATACTATATGGTAATCTAACTGTTGTCTTACCAACAATATTTAATGGAGTTACTGCATATACATTCT TGATATTTACTGCTTTATATACTCCATGTATAGCTGCACTTGCAACTATGAAAAAAGAATATGGCAATAAAATGATGTTT ACATCATTTGCATATCAATTTATACTAGCATGGATAATGGCTTTTATAGTTAAAAGTATAGGTGGAGTACTATTTATGGG TAATTCAATAATGGAAGCTTTGATAGGTGGAATAATTATAGTCCTTGCACTCTTTATTCTGTTTAATAAATTCAAGTCTA CAAAAAACGGAAATGTCTGTAGTGGATGTTCTATTTGTTCTGGATGTCCAAGTGCTAATTCTTGCTCAAGTAAGGAAGAC AGCAATAAAAAAAATAATGCACACTAA
Upstream 100 bases:
>100_bases TTGGAGACCCAATTATAATTAGATTTAGAGGCTTTGACCTTGCGATTAGAAAATCTGATGCTAAAAATATTTCTTTACAA TAATAGAGGAGGAGCTACCC
Downstream 100 bases:
>100_bases TATATAAATATTTTAGTTTAAAATAAGATAAAAGTGGGTGTCTCAAAATTAACTTTTTAGTTCATGAGGCACTCTTTTTT ATATAAAATCAAATATATTT
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 648; Mature: 648
Protein sequence:
>648_residues MINVALLGNPNVGKTTVFNLLTGSNQYVGNWPGVTIEKKEGFLGKEIKVVDLPGIYAMDTFSNEEKVSKSYLENEDVDVI VNVVDASNLSRNLYLTTQLMQFNKPIVILLNMLDIAESKGVNIDAKKLSEELGVIVVPIIAKKKNGVDRIEEEIKGATQK AFIYQKNFGSETETYKKLESILSRCTKTTYTQKKSISDKIDNIVLNPILAYPIFIGVLFLLFKFTFDWVGGPLQEGFASL IEAYISAPVSDMLSNSSPWFKSLIVDGIIGGVGGTLPFFPLIFTLFFGISLFEDSGYMSRTAFLMDKVMRKVGLSGKAFI PIVMGMGCSSPAIMATRTLESEKDRRVTALIAPLMTCGAKLPIYALFVAIFFPHNAALVTTSLYLVGIVMAIVVALFLNK TAFKTEAEPFILELPEYRIPTIDALIKNTWNKSKGFLIRVVTVMFAMSVVIWGLSSFNVFGYTEDINVSFLATLGHIISP IFKPLGFDDWRTSVAILSGLGAKEIVVNSLNILYGNLTVVLPTIFNGVTAYTFLIFTALYTPCIAALATMKKEYGNKMMF TSFAYQFILAWIMAFIVKSIGGVLFMGNSIMEALIGGIIIVLALFILFNKFKSTKNGNVCSGCSICSGCPSANSCSSKED SNKKNNAH
Sequences:
>Translated_648_residues MINVALLGNPNVGKTTVFNLLTGSNQYVGNWPGVTIEKKEGFLGKEIKVVDLPGIYAMDTFSNEEKVSKSYLENEDVDVI VNVVDASNLSRNLYLTTQLMQFNKPIVILLNMLDIAESKGVNIDAKKLSEELGVIVVPIIAKKKNGVDRIEEEIKGATQK AFIYQKNFGSETETYKKLESILSRCTKTTYTQKKSISDKIDNIVLNPILAYPIFIGVLFLLFKFTFDWVGGPLQEGFASL IEAYISAPVSDMLSNSSPWFKSLIVDGIIGGVGGTLPFFPLIFTLFFGISLFEDSGYMSRTAFLMDKVMRKVGLSGKAFI PIVMGMGCSSPAIMATRTLESEKDRRVTALIAPLMTCGAKLPIYALFVAIFFPHNAALVTTSLYLVGIVMAIVVALFLNK TAFKTEAEPFILELPEYRIPTIDALIKNTWNKSKGFLIRVVTVMFAMSVVIWGLSSFNVFGYTEDINVSFLATLGHIISP IFKPLGFDDWRTSVAILSGLGAKEIVVNSLNILYGNLTVVLPTIFNGVTAYTFLIFTALYTPCIAALATMKKEYGNKMMF TSFAYQFILAWIMAFIVKSIGGVLFMGNSIMEALIGGIIIVLALFILFNKFKSTKNGNVCSGCSICSGCPSANSCSSKED SNKKNNAH >Mature_648_residues MINVALLGNPNVGKTTVFNLLTGSNQYVGNWPGVTIEKKEGFLGKEIKVVDLPGIYAMDTFSNEEKVSKSYLENEDVDVI VNVVDASNLSRNLYLTTQLMQFNKPIVILLNMLDIAESKGVNIDAKKLSEELGVIVVPIIAKKKNGVDRIEEEIKGATQK AFIYQKNFGSETETYKKLESILSRCTKTTYTQKKSISDKIDNIVLNPILAYPIFIGVLFLLFKFTFDWVGGPLQEGFASL IEAYISAPVSDMLSNSSPWFKSLIVDGIIGGVGGTLPFFPLIFTLFFGISLFEDSGYMSRTAFLMDKVMRKVGLSGKAFI PIVMGMGCSSPAIMATRTLESEKDRRVTALIAPLMTCGAKLPIYALFVAIFFPHNAALVTTSLYLVGIVMAIVVALFLNK TAFKTEAEPFILELPEYRIPTIDALIKNTWNKSKGFLIRVVTVMFAMSVVIWGLSSFNVFGYTEDINVSFLATLGHIISP IFKPLGFDDWRTSVAILSGLGAKEIVVNSLNILYGNLTVVLPTIFNGVTAYTFLIFTALYTPCIAALATMKKEYGNKMMF TSFAYQFILAWIMAFIVKSIGGVLFMGNSIMEALIGGIIIVLALFILFNKFKSTKNGNVCSGCSICSGCPSANSCSSKED SNKKNNAH
Specific function: Fe(2+) uptake system, probably driven by GTP [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the feoB (TC 9.A.8) family [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=590, Percent_Identity=35.2542372881356, Blast_Score=338, Evalue=8e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR005225 [H]
Pfam domain/function: PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate [H]
EC number: NA
Molecular weight: Translated: 71106; Mature: 71106
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINVALLGNPNVGKTTVFNLLTGSNQYVGNWPGVTIEKKEGFLGKEIKVVDLPGIYAMDT CEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCEEEECC FSNEEKVSKSYLENEDVDVIVNVVDASNLSRNLYLTTQLMQFNKPIVILLNMLDIAESKG CCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEHHHHHHCCCCEEHHHHHHHHHCCC VNIDAKKLSEELGVIVVPIIAKKKNGVDRIEEEIKGATQKAFIYQKNFGSETETYKKLES CCCCHHHHHHHCCEEEEEEEECCCCCHHHHHHHHCCCHHHHEEEECCCCCCHHHHHHHHH ILSRCTKTTYTQKKSISDKIDNIVLNPILAYPIFIGVLFLLFKFTFDWVGGPLQEGFASL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH IEAYISAPVSDMLSNSSPWFKSLIVDGIIGGVGGTLPFFPLIFTLFFGISLFEDSGYMSR HHHHHHCCHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH TAFLMDKVMRKVGLSGKAFIPIVMGMGCSSPAIMATRTLESEKDRRVTALIAPLMTCGAK HHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCC LPIYALFVAIFFPHNAALVTTSLYLVGIVMAIVVALFLNKTAFKTEAEPFILELPEYRIP CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEECCCCCCC TIDALIKNTWNKSKGFLIRVVTVMFAMSVVIWGLSSFNVFGYTEDINVSFLATLGHIISP HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHH IFKPLGFDDWRTSVAILSGLGAKEIVVNSLNILYGNLTVVLPTIFNGVTAYTFLIFTALY HHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH TPCIAALATMKKEYGNKMMFTSFAYQFILAWIMAFIVKSIGGVLFMGNSIMEALIGGIII HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHH VLALFILFNKFKSTKNGNVCSGCSICSGCPSANSCSSKEDSNKKNNAH HHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MINVALLGNPNVGKTTVFNLLTGSNQYVGNWPGVTIEKKEGFLGKEIKVVDLPGIYAMDT CEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCEEEECC FSNEEKVSKSYLENEDVDVIVNVVDASNLSRNLYLTTQLMQFNKPIVILLNMLDIAESKG CCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEHHHHHHCCCCEEHHHHHHHHHCCC VNIDAKKLSEELGVIVVPIIAKKKNGVDRIEEEIKGATQKAFIYQKNFGSETETYKKLES CCCCHHHHHHHCCEEEEEEEECCCCCHHHHHHHHCCCHHHHEEEECCCCCCHHHHHHHHH ILSRCTKTTYTQKKSISDKIDNIVLNPILAYPIFIGVLFLLFKFTFDWVGGPLQEGFASL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH IEAYISAPVSDMLSNSSPWFKSLIVDGIIGGVGGTLPFFPLIFTLFFGISLFEDSGYMSR HHHHHHCCHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH TAFLMDKVMRKVGLSGKAFIPIVMGMGCSSPAIMATRTLESEKDRRVTALIAPLMTCGAK HHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCC LPIYALFVAIFFPHNAALVTTSLYLVGIVMAIVVALFLNKTAFKTEAEPFILELPEYRIP CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEECCCCCCC TIDALIKNTWNKSKGFLIRVVTVMFAMSVVIWGLSSFNVFGYTEDINVSFLATLGHIISP HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHH IFKPLGFDDWRTSVAILSGLGAKEIVVNSLNILYGNLTVVLPTIFNGVTAYTFLIFTALY HHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH TPCIAALATMKKEYGNKMMFTSFAYQFILAWIMAFIVKSIGGVLFMGNSIMEALIGGIII HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHH VLALFILFNKFKSTKNGNVCSGCSICSGCPSANSCSSKEDSNKKNNAH HHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA