| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126700570
Identifier: 126700570
GI number: 126700570
Start: 3426963
End: 3427436
Strand: Direct
Name: 126700570
Synonym: CD2951
Alternate gene names: NA
Gene position: 3426963-3427436 (Clockwise)
Preceding gene: 126700569
Following gene: 126700571
Centisome position: 79.88
GC content: 25.95
Gene sequence:
>474_bases ATGAATAGTTATGAAAAGTTACTCTCTGAAGCAGATGATAATAATATTATTGTTAGAGAAGTTCCTTTAATTTCAAATTC TCATGGATTATATAAAAATAATAGAATAGCTTTAAATAAAAATACACTTAATAATATAAGTGAAAAAGCTTGTGTGTTAG CAGAAGAACTAGGACATCATTATACTTCATATGGAAATATATTAGACCTAAATAAAGTTGAAAATAGCAAACAAGAATAT AAAGCTAGATTGATGGCTTACAACAAGTTAATTGGTCTTAAAGGTATAATAGATAGTTTTAATGCTGGCTGTAAGACTAT AACCGAAATGGCAGAATACCTTGATGTAACTGAAAAGTTTCTAAATGAAGCTTTAGAATGTTATAAAAGTAAATATGGTT TTTCAGCTACACTAGATAATTATGTGATATTTTTTGAGCCAAGATTTAGTATTATGAATGCAAATTTTTTGTAA
Upstream 100 bases:
>100_bases TAGCGGCACACAATGAACATTTACATGAAGAAGGAGAAATTGAAAAAATATATCAAGATTTAGATGATATGGATAATTGG TAAAATAGGTAGGTGAACTT
Downstream 100 bases:
>100_bases CAATTCATAGTATATTTAAGAGCCGTTCAGCTCCTCTTAAATATACAATAAGGGGGAATGTAAAATGTTAAGAGTAGCAC TTTATATACGTGTTAGTACA
Product: phage protein
Products: NA
Alternate protein names: Conserved Phage Protein; Pathogenicity Island Protein; Gp23-Like Protein
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MNSYEKLLSEADDNNIIVREVPLISNSHGLYKNNRIALNKNTLNNISEKACVLAEELGHHYTSYGNILDLNKVENSKQEY KARLMAYNKLIGLKGIIDSFNAGCKTITEMAEYLDVTEKFLNEALECYKSKYGFSATLDNYVIFFEPRFSIMNANFL
Sequences:
>Translated_157_residues MNSYEKLLSEADDNNIIVREVPLISNSHGLYKNNRIALNKNTLNNISEKACVLAEELGHHYTSYGNILDLNKVENSKQEY KARLMAYNKLIGLKGIIDSFNAGCKTITEMAEYLDVTEKFLNEALECYKSKYGFSATLDNYVIFFEPRFSIMNANFL >Mature_157_residues MNSYEKLLSEADDNNIIVREVPLISNSHGLYKNNRIALNKNTLNNISEKACVLAEELGHHYTSYGNILDLNKVENSKQEY KARLMAYNKLIGLKGIIDSFNAGCKTITEMAEYLDVTEKFLNEALECYKSKYGFSATLDNYVIFFEPRFSIMNANFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17941; Mature: 17941
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSYEKLLSEADDNNIIVREVPLISNSHGLYKNNRIALNKNTLNNISEKACVLAEELGHH CCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH YTSYGNILDLNKVENSKQEYKARLMAYNKLIGLKGIIDSFNAGCKTITEMAEYLDVTEKF HHCCCCEEECHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LNEALECYKSKYGFSATLDNYVIFFEPRFSIMNANFL HHHHHHHHHHHCCCCEECCCEEEEECCCEEECCCCCC >Mature Secondary Structure MNSYEKLLSEADDNNIIVREVPLISNSHGLYKNNRIALNKNTLNNISEKACVLAEELGHH CCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH YTSYGNILDLNKVENSKQEYKARLMAYNKLIGLKGIIDSFNAGCKTITEMAEYLDVTEKF HHCCCCEEECHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LNEALECYKSKYGFSATLDNYVIFFEPRFSIMNANFL HHHHHHHHHHHCCCCEECCCEEEEECCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA