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The map label for this gene is kdgT [H]

Identifier: 126700486

GI number: 126700486

Start: 3357631

End: 3358605

Strand: Direct

Name: kdgT [H]

Synonym: CD2870

Alternate gene names: 126700486

Gene position: 3357631-3358605 (Clockwise)

Preceding gene: 126700485

Following gene: 126700487

Centisome position: 78.26

GC content: 35.49

Gene sequence:

>975_bases
ATGCACATCTTAAAATCAGTGAAAAAGATACCAGGAGGACTTATGGTCTGTCCCTTGTTATTTGGAGCACTATTTAATAC
AGTATGTCCACAAGCTCTTGAAATTGGAGGATTCACAACATCCTTATTTAAAACTGGTGCAATGAGTATACTTGCTCTAT
TTTGTCTATGCAATGGAGCTCAAATCAATATCAGACAAGCTGGTAAACCATTGACTAAAGGTATAGTACTTACAGCAACA
AAATTTATAATTGGTGCAGTATTAGGTATTATTGTTAGTAAATTTATTGGACCTAAAGGTATAATTGGTATTACACCTCT
TGCCATAGTTGCTACCATGACTAATTCAAATGGAGGTCTATTTGCTGCTCTTGCAGGTGAATATGGAGACTCCACAGATG
TTGGAGCAATATCTATCTTATCTCTAAATGATGGTCCTTTTTTTACAATGCTTGCTTTTGGAGTAACTGGACTTGCAAAT
GTACCTATAGTAGCACTATTTGCAGCACTTATACCAATACTACTTGGATTTATACTTGGTAACCTTGATGAAGATATACG
AGAATTTCTTGCACCTGGTACAACATTATTAATTCCTTTCTTCGCTTTTCCTTTAGGAGCAGCATTAAACTTTAATCAAA
TTATAACTGCTGGACTACCTGGAGTTGTACTTGGTTTAGGAGTTACTATAATAACAGGTATGGGTGGGTACTTTGTAATG
AAACTTATACGTGCAGAACATCCAGCAGTAGGTGCAGCTACAGGTACAACAGCCGGAAATGCAGCTGGTACTCCTGAAGC
TTTAGCAGCTATAGACCCTACTCTAGCTACAATAGCAGCTGTTTCAACAGTACAGGTTGCTGCTGCTATTATTGTTACAG
CAATATGTTGTCCAATGTTAGTTTCCTATCTAGATAAAAGAGAAAAAAAGAAAAAATCTATTTTTAAAACAAATAAAAAT
ATTGAAGTAAATTAA

Upstream 100 bases:

>100_bases
TATTAAAAATAATCATAATAACTAAAGATACAAACTCTATATATTGGCATAGTAATTGCTTTTATAATACCTATATAAAA
ATGAAAGGGAGTGATACTAG

Downstream 100 bases:

>100_bases
TACTTAAGGAGGTAAAATTAATGAATGCAATTATTCATGCAAATGAAAAAGATAATCTAGTTACATGTGTCAGACCTTTA
GTTAAAGGTGAAAAAGTTTC

Product: 2-keto-3-deoxygluconate permease

Products: Proton [Cytoplasm]; 2-dehydro-3-deoxy-D-gluconate [Cytoplasm] [C]

Alternate protein names: KDG permease 2 [H]

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MHILKSVKKIPGGLMVCPLLFGALFNTVCPQALEIGGFTTSLFKTGAMSILALFCLCNGAQINIRQAGKPLTKGIVLTAT
KFIIGAVLGIIVSKFIGPKGIIGITPLAIVATMTNSNGGLFAALAGEYGDSTDVGAISILSLNDGPFFTMLAFGVTGLAN
VPIVALFAALIPILLGFILGNLDEDIREFLAPGTTLLIPFFAFPLGAALNFNQIITAGLPGVVLGLGVTIITGMGGYFVM
KLIRAEHPAVGAATGTTAGNAAGTPEALAAIDPTLATIAAVSTVQVAAAIIVTAICCPMLVSYLDKREKKKKSIFKTNKN
IEVN

Sequences:

>Translated_324_residues
MHILKSVKKIPGGLMVCPLLFGALFNTVCPQALEIGGFTTSLFKTGAMSILALFCLCNGAQINIRQAGKPLTKGIVLTAT
KFIIGAVLGIIVSKFIGPKGIIGITPLAIVATMTNSNGGLFAALAGEYGDSTDVGAISILSLNDGPFFTMLAFGVTGLAN
VPIVALFAALIPILLGFILGNLDEDIREFLAPGTTLLIPFFAFPLGAALNFNQIITAGLPGVVLGLGVTIITGMGGYFVM
KLIRAEHPAVGAATGTTAGNAAGTPEALAAIDPTLATIAAVSTVQVAAAIIVTAICCPMLVSYLDKREKKKKSIFKTNKN
IEVN
>Mature_324_residues
MHILKSVKKIPGGLMVCPLLFGALFNTVCPQALEIGGFTTSLFKTGAMSILALFCLCNGAQINIRQAGKPLTKGIVLTAT
KFIIGAVLGIIVSKFIGPKGIIGITPLAIVATMTNSNGGLFAALAGEYGDSTDVGAISILSLNDGPFFTMLAFGVTGLAN
VPIVALFAALIPILLGFILGNLDEDIREFLAPGTTLLIPFFAFPLGAALNFNQIITAGLPGVVLGLGVTIITGMGGYFVM
KLIRAEHPAVGAATGTTAGNAAGTPEALAAIDPTLATIAAVSTVQVAAAIIVTAICCPMLVSYLDKREKKKKSIFKTNKN
IEVN

Specific function: The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kdgT transporter family [H]

Homologues:

Organism=Escherichia coli, GI87082349, Length=318, Percent_Identity=37.7358490566038, Blast_Score=179, Evalue=3e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004684
- ProDom:   PD024513 [H]

Pfam domain/function: PF03812 KdgT [H]

EC number: NA

Molecular weight: Translated: 33306; Mature: 33306

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHILKSVKKIPGGLMVCPLLFGALFNTVCPQALEIGGFTTSLFKTGAMSILALFCLCNGA
CCHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
QINIRQAGKPLTKGIVLTATKFIIGAVLGIIVSKFIGPKGIIGITPLAIVATMTNSNGGL
EEEHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEEECCCCCE
FAALAGEYGDSTDVGAISILSLNDGPFFTMLAFGVTGLANVPIVALFAALIPILLGFILG
EEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
NLDEDIREFLAPGTTLLIPFFAFPLGAALNFNQIITAGLPGVVLGLGVTIITGMGGYFVM
CCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHCCHHHHHH
KLIRAEHPAVGAATGTTAGNAAGTPEALAAIDPTLATIAAVSTVQVAAAIIVTAICCPML
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSYLDKREKKKKSIFKTNKNIEVN
HHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MHILKSVKKIPGGLMVCPLLFGALFNTVCPQALEIGGFTTSLFKTGAMSILALFCLCNGA
CCHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
QINIRQAGKPLTKGIVLTATKFIIGAVLGIIVSKFIGPKGIIGITPLAIVATMTNSNGGL
EEEHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEEECCCCCE
FAALAGEYGDSTDVGAISILSLNDGPFFTMLAFGVTGLANVPIVALFAALIPILLGFILG
EEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
NLDEDIREFLAPGTTLLIPFFAFPLGAALNFNQIITAGLPGVVLGLGVTIITGMGGYFVM
CCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHCCHHHHHH
KLIRAEHPAVGAATGTTAGNAAGTPEALAAIDPTLATIAAVSTVQVAAAIIVTAICCPML
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSYLDKREKKKKSIFKTNKNIEVN
HHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; 2-dehydro-3-deoxy-D-gluconate [Periplasm] [C]

Specific reaction: Proton [Periplasm] + 2-dehydro-3-deoxy-D-gluconate [Periplasm] = Proton [Cytoplasm] + 2-dehydro-3-deoxy-D-gluconate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]