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The map label for this gene is 126700334

Identifier: 126700334

GI number: 126700334

Start: 3154447

End: 3155385

Strand: Direct

Name: 126700334

Synonym: CD2719

Alternate gene names: NA

Gene position: 3154447-3155385 (Clockwise)

Preceding gene: 126700333

Following gene: 126700342

Centisome position: 73.53

GC content: 28.86

Gene sequence:

>939_bases
ATGTTTAGAAAAGTATTGCATTATTTAACACTACTTTCTATTTCTATTTTTTTTATTGTTGGATGTTCAAATTCACAAAA
CAATCAAAACGAAAATCAAAATAAGGAAACACAGTTACAAGAAGATAAGGAAAAAATAGATAGTGGTAAAGATACTTCCA
ATGTAATAGTTTCAGACGGAACAGATAAACCATCAAAAGCCACTACTAATAATGATAATAATAAATTAGATGTATCTTCT
TTAGATAACACTACTCTTGATTGGTTTTATATACCAAACAATAAGCATAAAACACCAGAAGTAAATACGGACATTGAATT
TAAATTTTCTGACTATGATGCCCTATACAATGGACCTACAAAAGATGGTCAAAAAACACTATATCTTACATTTGATGAAG
GTTATGAAAATGGATACACTACAAAAATACTCGACACTCTAAAACAAAACCAGGTTAAAGCAGTTTTTTTTGTTACAGCT
CCATATATAAAAGAAAATAAAGATTTAGTAAAAAGAATGGTTTCTGAGGGACATATAGTTGGAAATCATAGTAAAACCCA
TCCATCTATGCCAACAAAAACAAGCAATCTAAAAAACTTTAATGACGAATTATATGATGTTGAAAAGTTATATAAAGATG
TAACTGGGAAAGATATGGTTAAATTTTTTAGACCTCCTATGGGAAAATACTCAGAAAAAAGCTTGGCAATGACTAAAAAT
TTAGGATACAAGACTGTATTTTGGAGTTTTGCATACAGAGACTGGGATACTGATAAACAACCATCACATGAAGAAGCAAC
GCAAAAAATAATGGATAATCTACATGATGGTTCTATCTTGTTACTACATGCAGTTTCCAAAACTAGTACAGAAATTTTAA
ATGATTTTATATCAAATGCAAGAAAACTAGGATATGAATTTGAACTCTTGGAGTATTAA

Upstream 100 bases:

>100_bases
TAATAGTAATTTCCAATTATAATAATACTATATGCAATTGTAATTAATCATATAATTATTATTATATGCAATTATTATTA
ATTTAGAAAGGAGCTTCAAA

Downstream 100 bases:

>100_bases
TATTTATAATTACATCTAAAGTCTACAAACTAATATAGTTAATATAATATAGGTTATAAAATAATAAATTAAAATTAGAA
TTTTTGTTTGGTGATAGTAT

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MFRKVLHYLTLLSISIFFIVGCSNSQNNQNENQNKETQLQEDKEKIDSGKDTSNVIVSDGTDKPSKATTNNDNNKLDVSS
LDNTTLDWFYIPNNKHKTPEVNTDIEFKFSDYDALYNGPTKDGQKTLYLTFDEGYENGYTTKILDTLKQNQVKAVFFVTA
PYIKENKDLVKRMVSEGHIVGNHSKTHPSMPTKTSNLKNFNDELYDVEKLYKDVTGKDMVKFFRPPMGKYSEKSLAMTKN
LGYKTVFWSFAYRDWDTDKQPSHEEATQKIMDNLHDGSILLLHAVSKTSTEILNDFISNARKLGYEFELLEY

Sequences:

>Translated_312_residues
MFRKVLHYLTLLSISIFFIVGCSNSQNNQNENQNKETQLQEDKEKIDSGKDTSNVIVSDGTDKPSKATTNNDNNKLDVSS
LDNTTLDWFYIPNNKHKTPEVNTDIEFKFSDYDALYNGPTKDGQKTLYLTFDEGYENGYTTKILDTLKQNQVKAVFFVTA
PYIKENKDLVKRMVSEGHIVGNHSKTHPSMPTKTSNLKNFNDELYDVEKLYKDVTGKDMVKFFRPPMGKYSEKSLAMTKN
LGYKTVFWSFAYRDWDTDKQPSHEEATQKIMDNLHDGSILLLHAVSKTSTEILNDFISNARKLGYEFELLEY
>Mature_312_residues
MFRKVLHYLTLLSISIFFIVGCSNSQNNQNENQNKETQLQEDKEKIDSGKDTSNVIVSDGTDKPSKATTNNDNNKLDVSS
LDNTTLDWFYIPNNKHKTPEVNTDIEFKFSDYDALYNGPTKDGQKTLYLTFDEGYENGYTTKILDTLKQNQVKAVFFVTA
PYIKENKDLVKRMVSEGHIVGNHSKTHPSMPTKTSNLKNFNDELYDVEKLYKDVTGKDMVKFFRPPMGKYSEKSLAMTKN
LGYKTVFWSFAYRDWDTDKQPSHEEATQKIMDNLHDGSILLLHAVSKTSTEILNDFISNARKLGYEFELLEY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323339, Length=156, Percent_Identity=31.4102564102564, Blast_Score=75, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509
- InterPro:   IPR014235 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 35912; Mature: 35912

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRKVLHYLTLLSISIFFIVGCSNSQNNQNENQNKETQLQEDKEKIDSGKDTSNVIVSDG
CHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECC
TDKPSKATTNNDNNKLDVSSLDNTTLDWFYIPNNKHKTPEVNTDIEFKFSDYDALYNGPT
CCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCHHHCCCCC
KDGQKTLYLTFDEGYENGYTTKILDTLKQNQVKAVFFVTAPYIKENKDLVKRMVSEGHIV
CCCCEEEEEEEECCCCCCCHHHHHHHHHHCCEEEEEEEECCCHHCCHHHHHHHHHCCCEE
GNHSKTHPSMPTKTSNLKNFNDELYDVEKLYKDVTGKDMVKFFRPPMGKYSEKSLAMTKN
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHC
LGYKTVFWSFAYRDWDTDKQPSHEEATQKIMDNLHDGSILLLHAVSKTSTEILNDFISNA
CCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHH
RKLGYEFELLEY
HHCCCEEEEECC
>Mature Secondary Structure
MFRKVLHYLTLLSISIFFIVGCSNSQNNQNENQNKETQLQEDKEKIDSGKDTSNVIVSDG
CHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECC
TDKPSKATTNNDNNKLDVSSLDNTTLDWFYIPNNKHKTPEVNTDIEFKFSDYDALYNGPT
CCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCHHHCCCCC
KDGQKTLYLTFDEGYENGYTTKILDTLKQNQVKAVFFVTAPYIKENKDLVKRMVSEGHIV
CCCCEEEEEEEECCCCCCCHHHHHHHHHHCCEEEEEEEECCCHHCCHHHHHHHHHCCCEE
GNHSKTHPSMPTKTSNLKNFNDELYDVEKLYKDVTGKDMVKFFRPPMGKYSEKSLAMTKN
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHC
LGYKTVFWSFAYRDWDTDKQPSHEEATQKIMDNLHDGSILLLHAVSKTSTEILNDFISNA
CCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHH
RKLGYEFELLEY
HHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8473853 [H]