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The map label for this gene is cdaR [C]

Identifier: 126700074

GI number: 126700074

Start: 2834224

End: 2834991

Strand: Direct

Name: cdaR [C]

Synonym: CD2457

Alternate gene names: 126700074

Gene position: 2834224-2834991 (Clockwise)

Preceding gene: 126700073

Following gene: 126700090

Centisome position: 66.06

GC content: 20.57

Gene sequence:

>768_bases
ATGGAAGAGTTAAAAGATTTTTTAGAAAGACAGCTTAATAAAAAAATAAATATCTATCCATATGAAAACCAAAAGTTAGA
TGCTAGTAGCCATTTAGTCACTTTCAATAATGCTATTTATGTTATTGATTTTCTAGATAAAAATAATCTCGATAATTTAA
AAGGCAACTTTTATTTAATTTACCAATCTCATATAGACTTTGAATATCTAAAAAATATTTTTTATAATTTATTTGAAGAT
ATAAATATAATACAACACAATGGTTTTTTTATAGTAAATTCTAAATATAACTTAGATATTAATGTAACTACACAAAATAT
AATTGAAACTGAAACTTATCAAAGTACTTATATTTTTTATCTTGGTGAATTAGATAGTAAAGCTGATTTTAATTTTAGAT
TACAGTTATGTTCTGATTTACTACCTCATATTATAAAAGACAACGCTGAAAATAAGTTTTTAAATTTGTTTGACCTTATT
AGATATAAAACTTTAGATTTAATTAATGAGGATAATATACTCAATAAATTAATAGATTTTAATAAGATTAAATCTATTGA
TGAAGAACTTCTATATACAGGAATAAAATTTATAAATAATGATTTAAATATTTCTAAGACATCTACTAGTATGTTTTTAC
ATAGAAACACGCTAGTATATAGATTGGAAAAGATTAATGAGATACTTGGGTTTGATTTAAAGAATTTTGAAAATGCAATG
ATTTTTTATCTAAGTGTCAAATCTTATTTTCTCTATAAAAAAATTTAA

Upstream 100 bases:

>100_bases
ACTTAATACTTTCAGTTGACAATAGTAGAGTACACATATTTGACAAAGAAACTACTTTAGCTATAAGATAAGAATATAAT
CTTATTTTTAAGGAGACTTT

Downstream 100 bases:

>100_bases
CCACTAAATTAAGCAGAGATTTGAAAGACTAGTTCAAATTTCTGCTTAATTTTAATTCAAAATATTGTATACTTATCGAG
TACTCTATGCTTCAAAACTT

Product: hypothetical protein

Products: NA

Alternate protein names: CdaR Family Transcriptional Regulator

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MEELKDFLERQLNKKINIYPYENQKLDASSHLVTFNNAIYVIDFLDKNNLDNLKGNFYLIYQSHIDFEYLKNIFYNLFED
INIIQHNGFFIVNSKYNLDINVTTQNIIETETYQSTYIFYLGELDSKADFNFRLQLCSDLLPHIIKDNAENKFLNLFDLI
RYKTLDLINEDNILNKLIDFNKIKSIDEELLYTGIKFINNDLNISKTSTSMFLHRNTLVYRLEKINEILGFDLKNFENAM
IFYLSVKSYFLYKKI

Sequences:

>Translated_255_residues
MEELKDFLERQLNKKINIYPYENQKLDASSHLVTFNNAIYVIDFLDKNNLDNLKGNFYLIYQSHIDFEYLKNIFYNLFED
INIIQHNGFFIVNSKYNLDINVTTQNIIETETYQSTYIFYLGELDSKADFNFRLQLCSDLLPHIIKDNAENKFLNLFDLI
RYKTLDLINEDNILNKLIDFNKIKSIDEELLYTGIKFINNDLNISKTSTSMFLHRNTLVYRLEKINEILGFDLKNFENAM
IFYLSVKSYFLYKKI
>Mature_255_residues
MEELKDFLERQLNKKINIYPYENQKLDASSHLVTFNNAIYVIDFLDKNNLDNLKGNFYLIYQSHIDFEYLKNIFYNLFED
INIIQHNGFFIVNSKYNLDINVTTQNIIETETYQSTYIFYLGELDSKADFNFRLQLCSDLLPHIIKDNAENKFLNLFDLI
RYKTLDLINEDNILNKLIDFNKIKSIDEELLYTGIKFINNDLNISKTSTSMFLHRNTLVYRLEKINEILGFDLKNFENAM
IFYLSVKSYFLYKKI

Specific function: Seems To Regulate The Expression Of The Operons For The Enzymes Involved In D-Galactarate, D-Glucarate And D-Glycerate Utilization. [C]

COG id: COG2508

COG function: function code TQ; Regulator of polyketide synthase expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30496; Mature: 30496

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEELKDFLERQLNKKINIYPYENQKLDASSHLVTFNNAIYVIDFLDKNNLDNLKGNFYLI
CHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEECCEEEEEEECCCCCCCCCCCCEEEE
YQSHIDFEYLKNIFYNLFEDINIIQHNGFFIVNSKYNLDINVTTQNIIETETYQSTYIFY
EECCCCHHHHHHHHHHHHHCCEEEEECCEEEEECEEEEEEEEEHHHHEECCCCCEEEEEE
LGELDSKADFNFRLQLCSDLLPHIIKDNAENKFLNLFDLIRYKTLDLINEDNILNKLIDF
EECCCCCCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
NKIKSIDEELLYTGIKFINNDLNISKTSTSMFLHRNTLVYRLEKINEILGFDLKNFENAM
HHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEE
IFYLSVKSYFLYKKI
EEEEEEEHEEEEECC
>Mature Secondary Structure
MEELKDFLERQLNKKINIYPYENQKLDASSHLVTFNNAIYVIDFLDKNNLDNLKGNFYLI
CHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEECCEEEEEEECCCCCCCCCCCCEEEE
YQSHIDFEYLKNIFYNLFEDINIIQHNGFFIVNSKYNLDINVTTQNIIETETYQSTYIFY
EECCCCHHHHHHHHHHHHHCCEEEEECCEEEEECEEEEEEEEEHHHHEECCCCCEEEEEE
LGELDSKADFNFRLQLCSDLLPHIIKDNAENKFLNLFDLIRYKTLDLINEDNILNKLIDF
EECCCCCCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
NKIKSIDEELLYTGIKFINNDLNISKTSTSMFLHRNTLVYRLEKINEILGFDLKNFENAM
HHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEE
IFYLSVKSYFLYKKI
EEEEEEEHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA