| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699989
Identifier: 126699989
GI number: 126699989
Start: 2740993
End: 2741421
Strand: Direct
Name: 126699989
Synonym: CD2374
Alternate gene names: NA
Gene position: 2740993-2741421 (Clockwise)
Preceding gene: 126699988
Following gene: 126699990
Centisome position: 63.89
GC content: 27.74
Gene sequence:
>429_bases ATGAATAATAAATTACATGAACTTGAAAAAAATCTACCAGAAACATCTTGTTCTTTTTGCACACATCTTTCATTTAAGGG GCCTAGCCTAGACTATAGATATGATATTAGATGTGTTATTTCAGATACAAAGCCTGATTTTAGAGGATGTTGTGAATATT TTGAACCAGAATATACAGAATTAAATACAGGAGATTTAGACAATCTATACATAAACTTTCTTGAGACATGCCTCAAGGTA AATTATAATGATTACATCAATTCTATGTATTGGAAGTTATTTAAAGAAAGAACCCTACTAGAAAACAATTTTAAATGTTC TATATGTGGATCAACTGAAAATGTTGATGTGTATCATGTTAATAAAAATTTAGGAAGGGAAACTTCCAAAGATGTAGTTG TTAAATGTGATAAATGTAATTGTAAATAA
Upstream 100 bases:
>100_bases TATTGGAATATTTATCCTAAATCTCTAATATAAATAAATAAAAGTTTTAAAATAATCTATTCGTTTATATACTTAAAATA AATTTTTTGGAGGAATACTT
Downstream 100 bases:
>100_bases GTGTATAAAATTTAGATAACTTCACATAATAAGTTTAAATAAAACTTAGGAGGTTATTTATGAAAAATAATAATTTAAAT TGTGCTGCTACTAATTGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MNNKLHELEKNLPETSCSFCTHLSFKGPSLDYRYDIRCVISDTKPDFRGCCEYFEPEYTELNTGDLDNLYINFLETCLKV NYNDYINSMYWKLFKERTLLENNFKCSICGSTENVDVYHVNKNLGRETSKDVVVKCDKCNCK
Sequences:
>Translated_142_residues MNNKLHELEKNLPETSCSFCTHLSFKGPSLDYRYDIRCVISDTKPDFRGCCEYFEPEYTELNTGDLDNLYINFLETCLKV NYNDYINSMYWKLFKERTLLENNFKCSICGSTENVDVYHVNKNLGRETSKDVVVKCDKCNCK >Mature_142_residues MNNKLHELEKNLPETSCSFCTHLSFKGPSLDYRYDIRCVISDTKPDFRGCCEYFEPEYTELNTGDLDNLYINFLETCLKV NYNDYINSMYWKLFKERTLLENNFKCSICGSTENVDVYHVNKNLGRETSKDVVVKCDKCNCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16681; Mature: 16681
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 9.2 %Cys+Met (Translated Protein) 7.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 9.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNKLHELEKNLPETSCSFCTHLSFKGPSLDYRYDIRCVISDTKPDFRGCCEYFEPEYTE CCCHHHHHHHCCCCCCHHHHHCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHCCCCCCC LNTGDLDNLYINFLETCLKVNYNDYINSMYWKLFKERTLLENNFKCSICGSTENVDVYHV CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEC NKNLGRETSKDVVVKCDKCNCK CCCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure MNNKLHELEKNLPETSCSFCTHLSFKGPSLDYRYDIRCVISDTKPDFRGCCEYFEPEYTE CCCHHHHHHHCCCCCCHHHHHCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHCCCCCCC LNTGDLDNLYINFLETCLKVNYNDYINSMYWKLFKERTLLENNFKCSICGSTENVDVYHV CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEC NKNLGRETSKDVVVKCDKCNCK CCCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA