| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699910
Identifier: 126699910
GI number: 126699910
Start: 2660635
End: 2661099
Strand: Direct
Name: 126699910
Synonym: CD2295
Alternate gene names: NA
Gene position: 2660635-2661099 (Clockwise)
Preceding gene: 126699909
Following gene: 126699922
Centisome position: 62.02
GC content: 24.09
Gene sequence:
>465_bases ATGGATTTTGGGGAAGTTAAATCAGAGTTAAGTGACAAAGACCTTAAAGATAATGAAGAAGCTTTAAACAAGTATAAAAA ATATTATTTAAAAGTTTATAAGTATTATAGTGAAATGGATTCCATAAAAAGTATTCAAGATATAGAAATAGAGCAATCTA GGCTTAAAGGACAGTTACAAAAAAATAGTAACCCCATTTTTGCTTTGTATATATCTATTATGGCTGTTGTATTTTCTACA ACAATTAACTTAACATTTGATTTATCAGATATCACTAATTATTTTATTAGAATGATTATGACACTTTTATTTATTGTACT TCTTATTTTTTTAGTTAACAAGGGCATTCTTCCAATAGCTATACCTTATAGAAATAATATACAATTTTATACTACTGCAT TAGATGTATTAGAAGATATGAAAAATAAAATACTTAGAGAGAGAAAGTATAAAAAAAGAAGGTAA
Upstream 100 bases:
>100_bases TACTCTATTTTTAGCTAAAATCGTTCGACAAATTGCTGATATAAGTTCTTAAATATGCTATAAATTAAAGTATATTATAT AACATTGTAGGAGGGATTTT
Downstream 100 bases:
>100_bases CAACCAACTCTAGTTGCTACCTTCTAATCTATTTAACTAAGTTTTCTACTTCACTAAATGCTTTCTCATTTCCATTTCCA CCAATTTGAGTTATATTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MDFGEVKSELSDKDLKDNEEALNKYKKYYLKVYKYYSEMDSIKSIQDIEIEQSRLKGQLQKNSNPIFALYISIMAVVFST TINLTFDLSDITNYFIRMIMTLLFIVLLIFLVNKGILPIAIPYRNNIQFYTTALDVLEDMKNKILRERKYKKRR
Sequences:
>Translated_154_residues MDFGEVKSELSDKDLKDNEEALNKYKKYYLKVYKYYSEMDSIKSIQDIEIEQSRLKGQLQKNSNPIFALYISIMAVVFST TINLTFDLSDITNYFIRMIMTLLFIVLLIFLVNKGILPIAIPYRNNIQFYTTALDVLEDMKNKILRERKYKKRR >Mature_154_residues MDFGEVKSELSDKDLKDNEEALNKYKKYYLKVYKYYSEMDSIKSIQDIEIEQSRLKGQLQKNSNPIFALYISIMAVVFST TINLTFDLSDITNYFIRMIMTLLFIVLLIFLVNKGILPIAIPYRNNIQFYTTALDVLEDMKNKILRERKYKKRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18309; Mature: 18309
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFGEVKSELSDKDLKDNEEALNKYKKYYLKVYKYYSEMDSIKSIQDIEIEQSRLKGQLQ CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNSNPIFALYISIMAVVFSTTINLTFDLSDITNYFIRMIMTLLFIVLLIFLVNKGILPIA CCCCCHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE IPYRNNIQFYTTALDVLEDMKNKILRERKYKKRR ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDFGEVKSELSDKDLKDNEEALNKYKKYYLKVYKYYSEMDSIKSIQDIEIEQSRLKGQLQ CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNSNPIFALYISIMAVVFSTTINLTFDLSDITNYFIRMIMTLLFIVLLIFLVNKGILPIA CCCCCHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE IPYRNNIQFYTTALDVLEDMKNKILRERKYKKRR ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA