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The map label for this gene is ygeA [H]

Identifier: 126699872

GI number: 126699872

Start: 2611942

End: 2612628

Strand: Direct

Name: ygeA [H]

Synonym: CD2254

Alternate gene names: 126699872

Gene position: 2611942-2612628 (Clockwise)

Preceding gene: 126699869

Following gene: 126699874

Centisome position: 60.88

GC content: 29.84

Gene sequence:

>687_bases
ATGAAGACTATAGGCTTAATTGGTGGTATGAGTTGGGAAAGTACCATTACATATTATCAAGTTATTAATACAGTAATAAA
AGAAAGATTAGGTGGACTACACTCTTCTAAATGTATACTTTACAGTGTAGATTTTCAAGAAATTGAAGAATGCCAATCTA
GTGGAAATTGGGAAAAAAGTGCCAAAATTTTAGCTGATGCTGCAATTAAATTACAAGAGGCAGGGGCAGATTTTATTGTT
ATCTGTACTAATACTATGCATAAGGTATCAGATAAAATACAAGAAAGTATACATATTCCATTACTTCACATAGCAGATGT
AACTGCTACGGTATTAAGGGAAAAAGAAATAAAAAAAGTGGCCTTATTAGGTACTAAATATACAATGGAACAAGATTTTT
ATAAAAATGTAATTATTAATAATGGAATTGAAGTCTTAATTCCAAATGAAGAAGACCGTATAATAGTAAATGACACAATA
TTTAACGAACTTTGCTTAGGAATTATATCTGAATCTTCAAAAAAAGCTTTCTTATCTATTATAGATAAGCTTGGCAAACA
AGGTGCAGAGGCTGTTATATTAGGATGTACAGAAATAGGTCTTTTAATTAAACAAAATGACACTTCTATTCCACTATTTG
ATACGACAGTAATACATGCAATAGAAGCCGCACTAAGTTCAATTTAA

Upstream 100 bases:

>100_bases
CTCCATACAATTTTATTATTGTATGCTTCTATTTTAGATGCTATACTTGTATTTGTAAATAGCTATTTCAAAATAAATAA
ATAAATAAGAGAGGTATAAT

Downstream 100 bases:

>100_bases
GACAATATTGATTAATAAAAAAAATATCTATAGATTTGTGTAAATAAGACTTTTTATAATTTATATTACTAGAGATTTTA
AACCTATATATTGTAACAAA

Product: amino acid recemase

Products: D-aspartate

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKTIGLIGGMSWESTITYYQVINTVIKERLGGLHSSKCILYSVDFQEIEECQSSGNWEKSAKILADAAIKLQEAGADFIV
ICTNTMHKVSDKIQESIHIPLLHIADVTATVLREKEIKKVALLGTKYTMEQDFYKNVIINNGIEVLIPNEEDRIIVNDTI
FNELCLGIISESSKKAFLSIIDKLGKQGAEAVILGCTEIGLLIKQNDTSIPLFDTTVIHAIEAALSSI

Sequences:

>Translated_228_residues
MKTIGLIGGMSWESTITYYQVINTVIKERLGGLHSSKCILYSVDFQEIEECQSSGNWEKSAKILADAAIKLQEAGADFIV
ICTNTMHKVSDKIQESIHIPLLHIADVTATVLREKEIKKVALLGTKYTMEQDFYKNVIINNGIEVLIPNEEDRIIVNDTI
FNELCLGIISESSKKAFLSIIDKLGKQGAEAVILGCTEIGLLIKQNDTSIPLFDTTVIHAIEAALSSI
>Mature_228_residues
MKTIGLIGGMSWESTITYYQVINTVIKERLGGLHSSKCILYSVDFQEIEECQSSGNWEKSAKILADAAIKLQEAGADFIV
ICTNTMHKVSDKIQESIHIPLLHIADVTATVLREKEIKKVALLGTKYTMEQDFYKNVIINNGIEVLIPNEEDRIIVNDTI
FNELCLGIISESSKKAFLSIIDKLGKQGAEAVILGCTEIGLLIKQNDTSIPLFDTTVIHAIEAALSSI

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI1789205, Length=224, Percent_Identity=54.9107142857143, Blast_Score=267, Evalue=5e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: 5.1.1.13

Molecular weight: Translated: 25142; Mature: 25142

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIGLIGGMSWESTITYYQVINTVIKERLGGLHSSKCILYSVDFQEIEECQSSGNWEKS
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCHHHH
AKILADAAIKLQEAGADFIVICTNTMHKVSDKIQESIHIPLLHIADVTATVLREKEIKKV
HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ALLGTKYTMEQDFYKNVIINNGIEVLIPNEEDRIIVNDTIFNELCLGIISESSKKAFLSI
HHCCCHHHHHHHHHHHHEECCCEEEEECCCCCCEEECHHHHHHHHHHHHCCCCHHHHHHH
IDKLGKQGAEAVILGCTEIGLLIKQNDTSIPLFDTTVIHAIEAALSSI
HHHHCCCCCCEEEEEEHHEEEEEECCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTIGLIGGMSWESTITYYQVINTVIKERLGGLHSSKCILYSVDFQEIEECQSSGNWEKS
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCHHHH
AKILADAAIKLQEAGADFIVICTNTMHKVSDKIQESIHIPLLHIADVTATVLREKEIKKV
HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ALLGTKYTMEQDFYKNVIINNGIEVLIPNEEDRIIVNDTIFNELCLGIISESSKKAFLSI
HHCCCHHHHHHHHHHHHEECCCEEEEECCCCCCEEECHHHHHHHHHHHHCCCCHHHHHHH
IDKLGKQGAEAVILGCTEIGLLIKQNDTSIPLFDTTVIHAIEAALSSI
HHHHCCCCCCEEEEEEHHEEEEEECCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-aspartate

Specific reaction: L-aspartate = D-aspartate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6350602; 2836407; 9278503 [H]