Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699833

Identifier: 126699833

GI number: 126699833

Start: 2567562

End: 2568239

Strand: Direct

Name: 126699833

Synonym: CD2216

Alternate gene names: NA

Gene position: 2567562-2568239 (Clockwise)

Preceding gene: 126699832

Following gene: 126699836

Centisome position: 59.85

GC content: 24.34

Gene sequence:

>678_bases
ATGATTGTGATTGAAGGTAGCGATAAATTTAAGATTGCAAAAGAATATATTGATGTAGAATATACTCTTTTTAGCAAAGT
AACTTTTAGGTATGAAAAGTTGAAATTTAAAGATAATGCTGAATTGGAAAAAATTAAGATGTTTAAATATAAAAATGGCT
ACATCCCTAATAAATTAAACCTTTCTTTTGGATATGGATTCTCTTCTTATAAAAAGCAAATAATTAGAGAAACTGTAGAT
ACTTTAAGATTGACAGAAATTTTTTCAAGCGAGAACATAGAAGATATTAAATTTATAAAAGATGGTACAAAAAAATTAGA
AATTAGCATAGAGAAAGTTGTGAAATTTAAACGTCGAAAAAAAAGAAATTATGTTTGTTGCTATTGCCCTGATATGTATA
GGGACATAAAACTCGACAAAGAATCTATCAATAAGATATACAACAGAAAAATAAAAATAGAAAGAGAAGTTAATATTTTT
GAAGATGAGGATGTTATAATAAACAAAAAAGTATTGAAGTTTCCAAAGTCTTGGACAAAGAATATGCAAAAATATTGGTT
AAGTGAAAATAAGTATCCCATACATTCTACTGTAATTGATGATGATAGATATAAATGTTGTAATGTACAATATACAAAAA
ATAGAGTGATAATATTATATTACATATATAACCATTAA

Upstream 100 bases:

>100_bases
TTTTTGTCTTTTTGTGTTAACATTGTCTTATAGTGCTAATGAGTACTATTAGACCATGTTCTATGGCCTTATTTTAATAT
AAAACGATTGGAGATAGGCT

Downstream 100 bases:

>100_bases
TATACATAATTACAAAAAAATAATGACAAATATACATAATACAAATATATCTTCTACTTTAGATAAAACAGTTATTATGA
AAACTTACTATCTATAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MIVIEGSDKFKIAKEYIDVEYTLFSKVTFRYEKLKFKDNAELEKIKMFKYKNGYIPNKLNLSFGYGFSSYKKQIIRETVD
TLRLTEIFSSENIEDIKFIKDGTKKLEISIEKVVKFKRRKKRNYVCCYCPDMYRDIKLDKESINKIYNRKIKIEREVNIF
EDEDVIINKKVLKFPKSWTKNMQKYWLSENKYPIHSTVIDDDRYKCCNVQYTKNRVIILYYIYNH

Sequences:

>Translated_225_residues
MIVIEGSDKFKIAKEYIDVEYTLFSKVTFRYEKLKFKDNAELEKIKMFKYKNGYIPNKLNLSFGYGFSSYKKQIIRETVD
TLRLTEIFSSENIEDIKFIKDGTKKLEISIEKVVKFKRRKKRNYVCCYCPDMYRDIKLDKESINKIYNRKIKIEREVNIF
EDEDVIINKKVLKFPKSWTKNMQKYWLSENKYPIHSTVIDDDRYKCCNVQYTKNRVIILYYIYNH
>Mature_225_residues
MIVIEGSDKFKIAKEYIDVEYTLFSKVTFRYEKLKFKDNAELEKIKMFKYKNGYIPNKLNLSFGYGFSSYKKQIIRETVD
TLRLTEIFSSENIEDIKFIKDGTKKLEISIEKVVKFKRRKKRNYVCCYCPDMYRDIKLDKESINKIYNRKIKIEREVNIF
EDEDVIINKKVLKFPKSWTKNMQKYWLSENKYPIHSTVIDDDRYKCCNVQYTKNRVIILYYIYNH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27373; Mature: 27373

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVIEGSDKFKIAKEYIDVEYTLFSKVTFRYEKLKFKDNAELEKIKMFKYKNGYIPNKLN
CEEEECCCCCEEEHHHHCEEEEEEHHHHEEEEEEEECCCCCHHHEEEEEECCCCCCCEEE
LSFGYGFSSYKKQIIRETVDTLRLTEIFSSENIEDIKFIKDGTKKLEISIEKVVKFKRRK
EEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEEEHHHHHHHHHHH
KRNYVCCYCPDMYRDIKLDKESINKIYNRKIKIEREVNIFEDEDVIINKKVLKFPKSWTK
CCCEEEEECCCHHHHCCCCHHHHHHHHCCEEEEEEECEEECCCCEEECHHHHHCCHHHHH
NMQKYWLSENKYPIHSTVIDDDRYKCCNVQYTKNRVIILYYIYNH
HHHHHHHCCCCCCCEEEEECCCCCEEECEEEECCCEEEEEEEECC
>Mature Secondary Structure
MIVIEGSDKFKIAKEYIDVEYTLFSKVTFRYEKLKFKDNAELEKIKMFKYKNGYIPNKLN
CEEEECCCCCEEEHHHHCEEEEEEHHHHEEEEEEEECCCCCHHHEEEEEECCCCCCCEEE
LSFGYGFSSYKKQIIRETVDTLRLTEIFSSENIEDIKFIKDGTKKLEISIEKVVKFKRRK
EEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEEEHHHHHHHHHHH
KRNYVCCYCPDMYRDIKLDKESINKIYNRKIKIEREVNIFEDEDVIINKKVLKFPKSWTK
CCCEEEEECCCHHHHCCCCHHHHHHHHCCEEEEEEECEEECCCCEEECHHHHHCCHHHHH
NMQKYWLSENKYPIHSTVIDDDRYKCCNVQYTKNRVIILYYIYNH
HHHHHHHCCCCCCCEEEEECCCCCEEECEEEECCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA