Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699562

Identifier: 126699562

GI number: 126699562

Start: 2251170

End: 2252369

Strand: Direct

Name: 126699562

Synonym: CD1953

Alternate gene names: NA

Gene position: 2251170-2252369 (Clockwise)

Preceding gene: 126699559

Following gene: 126699567

Centisome position: 52.47

GC content: 31.67

Gene sequence:

>1200_bases
ATGGATAGATTAGTTGGAACTGTTTCAAGAGGGGTTAGAGCACCTATTATAAGACAAGGAGATGACTTAGTTAAAATAGT
TGTTGATTCTGTTTTAAATGCGTCAAAAAGTGAAAACTTTGAAGTTAGGGACAAAGATGTAATTGCCGTTACAGAAGCTG
TTGTAGCTAGAGCACAGGGAAATTATGCTCACGTTGACAATATTGCAAAAGATGTAAAAGATAAATTTGGAGATGATACT
GTTGGAGTTATATTCCCAATTTTAAGTAGAAATCGTTTTGCTATATGTTTAAAAGGAATTGCAAAAGGATGTAGAAAAGT
CGTATTAATGTTAAGCTACCCTTCTGATGAAGTTGGAAATCACTTAATAAGTATTGATGAACTTGATGATAAGGGAATAA
ATCCTTGGTCAGATGTTTTAACAGAAGAAAAATACAGAGAACTATTTGGATATAACAAGCATACATTTACTGGTGTAGAT
TATGTTGATTATTATAAGAATTTAATCAAGGATTGTGGTGCAGAGGTAGAAATAGTATTTGCAAACAATCCAAAAACTAT
TCTTAACTATACAACAAGTATTTTAACTTGTGATATACATACAAGACAAAGAACAAAGAGAATTTTAAGACAAAATGGAG
CTAAAAAAGTATATTCACTTGATGATATAATGACAGCAAGTGTAGATGGTAGTGGTTACAATGACCAGTATGGACTTTTA
GGTTCAAACAAAGCTACAGAAGAAACAGTAAAATTATTCCCTATAAATTGTGATGAAGTTGTAAACAAAATCCAAGGTAA
TATAAAAGAAATAACAGGGAAAGATGTAGAAGTAATGGTTTATGGAGATGGAGCTTTTAAAGACCCTGTAGGTAAAATAT
GGGAATTAGCTGACCCAGTAGTATCTCCTGCTTATACAAAAGGGCTAGAGGGAACTCCAAACGAAGTAAAATTAAAATAC
TTAGCAGATAATGATTTTGCTGACTTATCTGGTGATGAGTTAAAAGAAGCAATTTCAAAATACATAGTTGAAAAAGATAA
TAAATCTGATGATTTAACAGGAAACATGGTTTCTCAAGGTACTACTCCAAGAAGATTAACAGACCTTATAGGTTCTTTAG
CAGATTTAACATCTGGAAGTGGAGATAAGGGTACTCCTATTATTTACATACAAGGATATTTCGATAACTATACAAAATAG

Upstream 100 bases:

>100_bases
TCAAATATTAGTATTATTTATTTTACTTATAATTATATTTGAATTATAATATACATGGTACTAATATGACAATATTAATT
CTTTAGGAGGATTTTAGATA

Downstream 100 bases:

>100_bases
TATGTTTTAATAAGATTTAAATTTTTTGGATTATATATATTAACATGAAAATTTATTAAAACCTCTTAATAGATATGACT
TTTCAAGAGTTATATCTATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MDRLVGTVSRGVRAPIIRQGDDLVKIVVDSVLNASKSENFEVRDKDVIAVTEAVVARAQGNYAHVDNIAKDVKDKFGDDT
VGVIFPILSRNRFAICLKGIAKGCRKVVLMLSYPSDEVGNHLISIDELDDKGINPWSDVLTEEKYRELFGYNKHTFTGVD
YVDYYKNLIKDCGAEVEIVFANNPKTILNYTTSILTCDIHTRQRTKRILRQNGAKKVYSLDDIMTASVDGSGYNDQYGLL
GSNKATEETVKLFPINCDEVVNKIQGNIKEITGKDVEVMVYGDGAFKDPVGKIWELADPVVSPAYTKGLEGTPNEVKLKY
LADNDFADLSGDELKEAISKYIVEKDNKSDDLTGNMVSQGTTPRRLTDLIGSLADLTSGSGDKGTPIIYIQGYFDNYTK

Sequences:

>Translated_399_residues
MDRLVGTVSRGVRAPIIRQGDDLVKIVVDSVLNASKSENFEVRDKDVIAVTEAVVARAQGNYAHVDNIAKDVKDKFGDDT
VGVIFPILSRNRFAICLKGIAKGCRKVVLMLSYPSDEVGNHLISIDELDDKGINPWSDVLTEEKYRELFGYNKHTFTGVD
YVDYYKNLIKDCGAEVEIVFANNPKTILNYTTSILTCDIHTRQRTKRILRQNGAKKVYSLDDIMTASVDGSGYNDQYGLL
GSNKATEETVKLFPINCDEVVNKIQGNIKEITGKDVEVMVYGDGAFKDPVGKIWELADPVVSPAYTKGLEGTPNEVKLKY
LADNDFADLSGDELKEAISKYIVEKDNKSDDLTGNMVSQGTTPRRLTDLIGSLADLTSGSGDKGTPIIYIQGYFDNYTK
>Mature_399_residues
MDRLVGTVSRGVRAPIIRQGDDLVKIVVDSVLNASKSENFEVRDKDVIAVTEAVVARAQGNYAHVDNIAKDVKDKFGDDT
VGVIFPILSRNRFAICLKGIAKGCRKVVLMLSYPSDEVGNHLISIDELDDKGINPWSDVLTEEKYRELFGYNKHTFTGVD
YVDYYKNLIKDCGAEVEIVFANNPKTILNYTTSILTCDIHTRQRTKRILRQNGAKKVYSLDDIMTASVDGSGYNDQYGLL
GSNKATEETVKLFPINCDEVVNKIQGNIKEITGKDVEVMVYGDGAFKDPVGKIWELADPVVSPAYTKGLEGTPNEVKLKY
LADNDFADLSGDELKEAISKYIVEKDNKSDDLTGNMVSQGTTPRRLTDLIGSLADLTSGSGDKGTPIIYIQGYFDNYTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44100; Mature: 44100

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRLVGTVSRGVRAPIIRQGDDLVKIVVDSVLNASKSENFEVRDKDVIAVTEAVVARAQG
CCCHHHHHHCCCCCCHHCCCCHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHCCC
NYAHVDNIAKDVKDKFGDDTVGVIFPILSRNRFAICLKGIAKGCRKVVLMLSYPSDEVGN
CCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEECCCHHHCC
HLISIDELDDKGINPWSDVLTEEKYRELFGYNKHTFTGVDYVDYYKNLIKDCGAEVEIVF
CEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHCCCCEEEEE
ANNPKTILNYTTSILTCDIHTRQRTKRILRQNGAKKVYSLDDIMTASVDGSGYNDQYGLL
CCCCCHHHEECEEEEEEECHHHHHHHHHHHHCCCCCEEEHHHHEEEECCCCCCCCCCCCC
GSNKATEETVKLFPINCDEVVNKIQGNIKEITGKDVEVMVYGDGAFKDPVGKIWELADPV
CCCCCCCCEEEEEECCHHHHHHHHCCCHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCHH
VSPAYTKGLEGTPNEVKLKYLADNDFADLSGDELKEAISKYIVEKDNKSDDLTGNMVSQG
CCCHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHCC
TTPRRLTDLIGSLADLTSGSGDKGTPIIYIQGYFDNYTK
CCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MDRLVGTVSRGVRAPIIRQGDDLVKIVVDSVLNASKSENFEVRDKDVIAVTEAVVARAQG
CCCHHHHHHCCCCCCHHCCCCHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHCCC
NYAHVDNIAKDVKDKFGDDTVGVIFPILSRNRFAICLKGIAKGCRKVVLMLSYPSDEVGN
CCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEECCCHHHCC
HLISIDELDDKGINPWSDVLTEEKYRELFGYNKHTFTGVDYVDYYKNLIKDCGAEVEIVF
CEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHCCCCEEEEE
ANNPKTILNYTTSILTCDIHTRQRTKRILRQNGAKKVYSLDDIMTASVDGSGYNDQYGLL
CCCCCHHHEECEEEEEEECHHHHHHHHHHHHCCCCCEEEHHHHEEEECCCCCCCCCCCCC
GSNKATEETVKLFPINCDEVVNKIQGNIKEITGKDVEVMVYGDGAFKDPVGKIWELADPV
CCCCCCCCEEEEEECCHHHHHHHHCCCHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCHH
VSPAYTKGLEGTPNEVKLKYLADNDFADLSGDELKEAISKYIVEKDNKSDDLTGNMVSQG
CCCHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHCC
TTPRRLTDLIGSLADLTSGSGDKGTPIIYIQGYFDNYTK
CCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA