| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is eutC
Identifier: 126699524
GI number: 126699524
Start: 2215743
End: 2216624
Strand: Direct
Name: eutC
Synonym: CD1914
Alternate gene names: 126699524
Gene position: 2215743-2216624 (Clockwise)
Preceding gene: 126699523
Following gene: 126699525
Centisome position: 51.65
GC content: 32.09
Gene sequence:
>882_bases ATGAATGAGAAGGATTTAAAAGCATTGGTAGAACAATTAGTTGGACAAATGGTTGGAGAATTAGATACTAATGTTGTGTC TGAGACTGTTAAAAAGGCAACTGAAGTTGTAGTAGACAACAATGCTTGTATAGATGATATAACAGAAGTTGATATAAGAA AGCAATTACTAGTAAAAAATCCTAAGGATGCAGAAGCTTATTTAGATATGAAAGCAAAAACACCTGCAAGATTAGGTATA GGAAGAGCTGGTACTAGATATAAAACAGAAACAGTTTTAAGATTTAGAGCAGACCATGCTGCTGCACAAGATGCTGTATT CTCTTATGTAGATGAAGAATTTATAAAAGAAAATAATATGTTTGCAGTGGAAACTTTATGTAAAGATAAAGATGAATACT TAACAAGACCAGATTTGGGAAGAAAATTTTCTCCAGAAACTATAAATAATATAAAATCTAAATTTGGTACAAATCAAAAG GTTTTAATATTAGTTGGAGATGGGCTTAGCTCAGCTGCAATAGAGGCAAATTTAAAAGACTGTGTGCCAGCTATAAAACA GGGTCTAAAAATGTATGGTATAGATTCAAGTGAAATTTTATTTGTTAAACATTGTAGAGTTGGTGCTATGGACCACTTAG GTGAAGAATTAGGTTGTGAAGTTATATGTATGTTGGTTGGAGAAAGACCAGGATTAGTTACTGCTGAATCAATGTCAGCA TATATAGCTTATAAGCCATATATAGGAATGGCAGAAGCAAAAAGAACAGTTATATCAAATATTCACAAAGGTGGAACAAC TGCAGTTGAAGCAGGTGCTCATATAGCTGAACTTATAAAAACTATGTTAGATAAAAAAGCTTCAGGAATAGACCTTAAAT AA
Upstream 100 bases:
>100_bases ATTTGATGCTTGGATGGAAAAAATGGGATTCTCTAAAGATGGTAAGTTAACAGAGTTGGCGGGAGACGCATCTATATTAT TAGGATAGGAGGTATTTAAT
Downstream 100 bases:
>100_bases AGTCGAGGGAGTGTAGAATATGAAAAATGATGTAATTCGTCCTAATATACTAGGAATTAAAATAATTTCAAATATAAGTC CAGAAATGGCACAAAAACTA
Product: ethanolamine ammonia-lyase small subunit
Products: NA
Alternate protein names: Ethanolamine ammonia-lyase small subunit
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MNEKDLKALVEQLVGQMVGELDTNVVSETVKKATEVVVDNNACIDDITEVDIRKQLLVKNPKDAEAYLDMKAKTPARLGI GRAGTRYKTETVLRFRADHAAAQDAVFSYVDEEFIKENNMFAVETLCKDKDEYLTRPDLGRKFSPETINNIKSKFGTNQK VLILVGDGLSSAAIEANLKDCVPAIKQGLKMYGIDSSEILFVKHCRVGAMDHLGEELGCEVICMLVGERPGLVTAESMSA YIAYKPYIGMAEAKRTVISNIHKGGTTAVEAGAHIAELIKTMLDKKASGIDLK
Sequences:
>Translated_293_residues MNEKDLKALVEQLVGQMVGELDTNVVSETVKKATEVVVDNNACIDDITEVDIRKQLLVKNPKDAEAYLDMKAKTPARLGI GRAGTRYKTETVLRFRADHAAAQDAVFSYVDEEFIKENNMFAVETLCKDKDEYLTRPDLGRKFSPETINNIKSKFGTNQK VLILVGDGLSSAAIEANLKDCVPAIKQGLKMYGIDSSEILFVKHCRVGAMDHLGEELGCEVICMLVGERPGLVTAESMSA YIAYKPYIGMAEAKRTVISNIHKGGTTAVEAGAHIAELIKTMLDKKASGIDLK >Mature_293_residues MNEKDLKALVEQLVGQMVGELDTNVVSETVKKATEVVVDNNACIDDITEVDIRKQLLVKNPKDAEAYLDMKAKTPARLGI GRAGTRYKTETVLRFRADHAAAQDAVFSYVDEEFIKENNMFAVETLCKDKDEYLTRPDLGRKFSPETINNIKSKFGTNQK VLILVGDGLSSAAIEANLKDCVPAIKQGLKMYGIDSSEILFVKHCRVGAMDHLGEELGCEVICMLVGERPGLVTAESMSA YIAYKPYIGMAEAKRTVISNIHKGGTTAVEAGAHIAELIKTMLDKKASGIDLK
Specific function: Ethanolamine utilization. [C]
COG id: COG4302
COG function: function code E; Ethanolamine ammonia-lyase, small subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eutC family
Homologues:
Organism=Escherichia coli, GI1788781, Length=293, Percent_Identity=37.2013651877133, Blast_Score=210, Evalue=9e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): EUTC_CLOD6 (Q187M6)
Other databases:
- EMBL: AM180355 - RefSeq: YP_001088421.1 - STRING: Q187M6 - GeneID: 4915600 - GenomeReviews: AM180355_GR - KEGG: cdf:CD1914 - NMPDR: fig|1496.1.peg.2887 - eggNOG: COG4302 - HOGENOM: HBG363176 - OMA: IHKGGTP - ProtClustDB: PRK05465 - HAMAP: MF_00601 - InterPro: IPR009246 - PIRSF: PIRSF018982
Pfam domain/function: PF05985 EutC
EC number: =4.3.1.7
Molecular weight: Translated: 32089; Mature: 32089
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEKDLKALVEQLVGQMVGELDTNVVSETVKKATEVVVDNNACIDDITEVDIRKQLLVKN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC PKDAEAYLDMKAKTPARLGIGRAGTRYKTETVLRFRADHAAAQDAVFSYVDEEFIKENNM CCCHHHHEECCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC FAVETLCKDKDEYLTRPDLGRKFSPETINNIKSKFGTNQKVLILVGDGLSSAAIEANLKD EEEHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHCCHHH CVPAIKQGLKMYGIDSSEILFVKHCRVGAMDHLGEELGCEVICMLVGERPGLVTAESMSA HHHHHHHCCEEECCCCCCEEEEECCCCCCHHHHHHHHCHHEEEHHHCCCCCEEEHHCCCE YIAYKPYIGMAEAKRTVISNIHKGGTTAVEAGAHIAELIKTMLDKKASGIDLK EEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNEKDLKALVEQLVGQMVGELDTNVVSETVKKATEVVVDNNACIDDITEVDIRKQLLVKN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC PKDAEAYLDMKAKTPARLGIGRAGTRYKTETVLRFRADHAAAQDAVFSYVDEEFIKENNM CCCHHHHEECCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC FAVETLCKDKDEYLTRPDLGRKFSPETINNIKSKFGTNQKVLILVGDGLSSAAIEANLKD EEEHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHCCHHH CVPAIKQGLKMYGIDSSEILFVKHCRVGAMDHLGEELGCEVICMLVGERPGLVTAESMSA HHHHHHHCCEEECCCCCCEEEEECCCCCCHHHHHHHHCHHEEEHHHCCCCCEEEHHCCCE YIAYKPYIGMAEAKRTVISNIHKGGTTAVEAGAHIAELIKTMLDKKASGIDLK EEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA