| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is eutA [H]
Identifier: 126699522
GI number: 126699522
Start: 2212915
End: 2214348
Strand: Direct
Name: eutA [H]
Synonym: CD1912
Alternate gene names: 126699522
Gene position: 2212915-2214348 (Clockwise)
Preceding gene: 126699521
Following gene: 126699523
Centisome position: 51.58
GC content: 29.08
Gene sequence:
>1434_bases ATGAGAGAAGAGTTATTAAGTGTTGGTATTGACATTGGAACAAGTACTACTCAGTTAATTTTTTCTAAATTAATAGTAGA AAATACTGAATCAAATTTTTCGGTACCTAGAATAAGTATAGTAGACAAAGAAATTATTTATAAAAGCAAAGTTTATTTCA CCCCTCTTATTTCAAATAATGAAATAAATGGTCAACAAATAAAAGATATAGTTGAAAATGAATATAAAAAAGCAAATATA TCTAAAGAAGATATACATACAGGAGCAGTAATAATAACTGGTGAAACAGCTAGAAAAGAAAATGCAAATGATGTACTTCA TACTTTGAGTGGATTTGCTGGGGACTTCGTTGTTGCAACAGCAGGACCTGATTTAGAAAGTATAATATCAGGAAAAGGAG CTGGAGCTCATATTTATTCAAAAGAACATTCAACTACAATTGTAAATATAGACATAGGTGGGGGAACTAGTAACATAGCC TCATTTAAAAGGGGAGAAGTAACCGATACTGGGTGTTTGGATATAGGTGGAAGGCTTGTAAAGATAGATAAAATAAGTAA AAAAATAACTTATATATCACCTAAAATAGATAAAATCATAAAAGATAATAATTTAAATCTTCAAGTAGGTACAATGGCTA CTGTAGAAAATACAAAGCCAATAGTGGATATAATGGTTGACTTATTAATGGAAAGCATAGGACTAAGGAAACAGACACCT TTGTTTGATTTTATAATAACCAATAAATCAATAAGTATAGATGAAAATATTAAAAATGTTTCATTCTCTGGTGGAGTAGC TGATTATATTTACTATGATGGAGAAATAAAAGATTATTTTGAATATGGTGACTTGGGAATTTTACTTGGGCAAGCAATAA AAAATTGTGAATACCTTAAAAAAGTAAATGTAGTTAAATCTATGGAAACAATAAGAGCCACAGTGGTTGGAGCAGGTTCT CATACTACTGAAGTAAGTGGAAGTACAATAACTTACACTAGCGAAAAGTTTCCACTTAAGAACTTGCCAGTTTTAAAATT ATCAATTGATGAAGAAACAGGTACTTCAAAACAAATCAGTGAAGCTATAAAAAATAAACTTAATTGGTTTAAACTAGAAA ATGATTTACAGAAAGTTGCTATAGCCATGATAGGAAAGAAAAATCCAACCTTTTTAGATATACAAGCGTATGCTAAAGGG TTTGTAGATGGAATGCAACAAATCATAGAAAATGATTTACCTTTTATAGTAATTGTTGAAAATGATATGGCAAAAGTGTT AGGTCAAGCAATATATGCATTATTAAATTATGAAAAAGAAATTGTTTGTATAGACAGTGTCAAGGTTGAAAATGGAGACT ATATCGATATTGGAAAACCTATAGTTGAAGGTAAAGTTTTACCTGTGGTAATAAAAACATTAGTTTTTAATTAA
Upstream 100 bases:
>100_bases TATAAAAATTATAAGTATATATTCAATTTAACAGGTATTTATTATAACTTTAAGCCTCTTTGCTTGTTTAAGACATACTT AAATTTTAGGAGGTGAGAAA
Downstream 100 bases:
>100_bases TAGAAGGAGGTAAGTAAATGATTTTAAATACAAAATTATTTGGACGTACTTATCAGTTTAAAGGCTTATATGATGTAATG GCTAAAGCTAATGAAGAAAA
Product: reactivating factor for ethanolamine ammonia lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 477; Mature: 477
Protein sequence:
>477_residues MREELLSVGIDIGTSTTQLIFSKLIVENTESNFSVPRISIVDKEIIYKSKVYFTPLISNNEINGQQIKDIVENEYKKANI SKEDIHTGAVIITGETARKENANDVLHTLSGFAGDFVVATAGPDLESIISGKGAGAHIYSKEHSTTIVNIDIGGGTSNIA SFKRGEVTDTGCLDIGGRLVKIDKISKKITYISPKIDKIIKDNNLNLQVGTMATVENTKPIVDIMVDLLMESIGLRKQTP LFDFIITNKSISIDENIKNVSFSGGVADYIYYDGEIKDYFEYGDLGILLGQAIKNCEYLKKVNVVKSMETIRATVVGAGS HTTEVSGSTITYTSEKFPLKNLPVLKLSIDEETGTSKQISEAIKNKLNWFKLENDLQKVAIAMIGKKNPTFLDIQAYAKG FVDGMQQIIENDLPFIVIVENDMAKVLGQAIYALLNYEKEIVCIDSVKVENGDYIDIGKPIVEGKVLPVVIKTLVFN
Sequences:
>Translated_477_residues MREELLSVGIDIGTSTTQLIFSKLIVENTESNFSVPRISIVDKEIIYKSKVYFTPLISNNEINGQQIKDIVENEYKKANI SKEDIHTGAVIITGETARKENANDVLHTLSGFAGDFVVATAGPDLESIISGKGAGAHIYSKEHSTTIVNIDIGGGTSNIA SFKRGEVTDTGCLDIGGRLVKIDKISKKITYISPKIDKIIKDNNLNLQVGTMATVENTKPIVDIMVDLLMESIGLRKQTP LFDFIITNKSISIDENIKNVSFSGGVADYIYYDGEIKDYFEYGDLGILLGQAIKNCEYLKKVNVVKSMETIRATVVGAGS HTTEVSGSTITYTSEKFPLKNLPVLKLSIDEETGTSKQISEAIKNKLNWFKLENDLQKVAIAMIGKKNPTFLDIQAYAKG FVDGMQQIIENDLPFIVIVENDMAKVLGQAIYALLNYEKEIVCIDSVKVENGDYIDIGKPIVEGKVLPVVIKTLVFN >Mature_477_residues MREELLSVGIDIGTSTTQLIFSKLIVENTESNFSVPRISIVDKEIIYKSKVYFTPLISNNEINGQQIKDIVENEYKKANI SKEDIHTGAVIITGETARKENANDVLHTLSGFAGDFVVATAGPDLESIISGKGAGAHIYSKEHSTTIVNIDIGGGTSNIA SFKRGEVTDTGCLDIGGRLVKIDKISKKITYISPKIDKIIKDNNLNLQVGTMATVENTKPIVDIMVDLLMESIGLRKQTP LFDFIITNKSISIDENIKNVSFSGGVADYIYYDGEIKDYFEYGDLGILLGQAIKNCEYLKKVNVVKSMETIRATVVGAGS HTTEVSGSTITYTSEKFPLKNLPVLKLSIDEETGTSKQISEAIKNKLNWFKLENDLQKVAIAMIGKKNPTFLDIQAYAKG FVDGMQQIIENDLPFIVIVENDMAKVLGQAIYALLNYEKEIVCIDSVKVENGDYIDIGKPIVEGKVLPVVIKTLVFN
Specific function: May protect the eutBC lyase from inhibition [H]
COG id: COG4819
COG function: function code E; Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788793, Length=477, Percent_Identity=35.6394129979036, Blast_Score=280, Evalue=1e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009377 [H]
Pfam domain/function: PF06277 EutA [H]
EC number: NA
Molecular weight: Translated: 52413; Mature: 52413
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREELLSVGIDIGTSTTQLIFSKLIVENTESNFSVPRISIVDKEIIYKSKVYFTPLISNN CCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHEECCEEEEEEECCC EINGQQIKDIVENEYKKANISKEDIHTGAVIITGETARKENANDVLHTLSGFAGDFVVAT CCCHHHHHHHHHHHHHHCCCCHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEE AGPDLESIISGKGAGAHIYSKEHSTTIVNIDIGGGTSNIASFKRGEVTDTGCLDIGGRLV CCCCHHHHHCCCCCCCEEEECCCCEEEEEEEECCCCCHHHHCCCCCCCCCCEECCCCEEE KIDKISKKITYISPKIDKIIKDNNLNLQVGTMATVENTKPIVDIMVDLLMESIGLRKQTP EEEHHCCEEEEECCHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCC LFDFIITNKSISIDENIKNVSFSGGVADYIYYDGEIKDYFEYGDLGILLGQAIKNCEYLK CEEEEEECCCEEECCCCCEEECCCCEEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHH KVNVVKSMETIRATVVGAGSHTTEVSGSTITYTSEKFPLKNLPVLKLSIDEETGTSKQIS HHHHHHHHHHHEEEEEECCCCCEECCCCEEEEECCCCCCCCCCEEEEEECCCCCCHHHHH EAIKNKLNWFKLENDLQKVAIAMIGKKNPTFLDIQAYAKGFVDGMQQIIENDLPFIVIVE HHHHHCCCEEEEHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEEC NDMAKVLGQAIYALLNYEKEIVCIDSVKVENGDYIDIGKPIVEGKVLPVVIKTLVFN CHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCEEECCCCHHCCCHHHHHHHHHHCC >Mature Secondary Structure MREELLSVGIDIGTSTTQLIFSKLIVENTESNFSVPRISIVDKEIIYKSKVYFTPLISNN CCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHEECCEEEEEEECCC EINGQQIKDIVENEYKKANISKEDIHTGAVIITGETARKENANDVLHTLSGFAGDFVVAT CCCHHHHHHHHHHHHHHCCCCHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEE AGPDLESIISGKGAGAHIYSKEHSTTIVNIDIGGGTSNIASFKRGEVTDTGCLDIGGRLV CCCCHHHHHCCCCCCCEEEECCCCEEEEEEEECCCCCHHHHCCCCCCCCCCEECCCCEEE KIDKISKKITYISPKIDKIIKDNNLNLQVGTMATVENTKPIVDIMVDLLMESIGLRKQTP EEEHHCCEEEEECCHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCC LFDFIITNKSISIDENIKNVSFSGGVADYIYYDGEIKDYFEYGDLGILLGQAIKNCEYLK CEEEEEECCCEEECCCCCEEECCCCEEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHH KVNVVKSMETIRATVVGAGSHTTEVSGSTITYTSEKFPLKNLPVLKLSIDEETGTSKQIS HHHHHHHHHHHEEEEEECCCCCEECCCCEEEEECCCCCCCCCCEEEEEECCCCCCHHHHH EAIKNKLNWFKLENDLQKVAIAMIGKKNPTFLDIQAYAKGFVDGMQQIIENDLPFIVIVE HHHHHCCCEEEEHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEEC NDMAKVLGQAIYALLNYEKEIVCIDSVKVENGDYIDIGKPIVEGKVLPVVIKTLVFN CHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCEEECCCCHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10464203; 11677609 [H]