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The map label for this gene is pdtaR [H]

Identifier: 126699520

GI number: 126699520

Start: 2210754

End: 2211329

Strand: Direct

Name: pdtaR [H]

Synonym: CD1910

Alternate gene names: 126699520

Gene position: 2210754-2211329 (Clockwise)

Preceding gene: 126699519

Following gene: 126699521

Centisome position: 51.53

GC content: 28.82

Gene sequence:

>576_bases
ATGGGGAAAAAAATACTATTGGTTGATGATGAACCACTGTTAAGGATGGATACAAAAGATATATTAGAAAGTCATGGCTA
TGAAATAATAGGCGAAGCAAGTGATGGATTTGAAGCTGTTGAAATGTGTAAAAAACACAAACCTGATTTAGTTATAATGG
ATATAGAGATGCCAATACTTGATGGTATAAAGGCAGGCAAAATAATATGTAAAGAAAATCTAGCTGGTGGAGTACTTTTA
TTAACTTCATTTGAAGATAAAGAATACGTAGAAAAGGCTAAAAGTATAGGTGCTTATGGATATTTAGTAAAAACAGCAAG
TGAAAAATCACTTATCCCAACCATAGAAATGTGTTTAAATAAGGTAAATGAATTTGAAAAAATGAAAAAAGATTTAGAAA
AAGTAAATTCTAAATTGAATGAAAGAAAATTAGTAGAAAGAGCAAAAGGTATACTTATAAGAGAGTTTAAGATTTCTGAG
GATGAAGCATACACTAGAATAAGAAAATTAAGTATGGATAAAAGAACTACAATGATGGAAATTGCCAAAATGATTATAAT
AGGATACGATGACTAA

Upstream 100 bases:

>100_bases
GGGAAATATTTTTTTATTCAAAAATATTATTAAAGTATGATAAAATAAAAAAATGTATAAACTATTTTAAGAAGATTTAA
TCTTTAAGCGAGGTAGGAAC

Downstream 100 bases:

>100_bases
TACGATAAAAAAAATATCAACTGCACAAACATACTTAAATAATAACGAAATTGAAAAAATTATAGAAGTATCAAAATCCT
TAGATTTAATGGCTTCTTTT

Product: two-component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MGKKILLVDDEPLLRMDTKDILESHGYEIIGEASDGFEAVEMCKKHKPDLVIMDIEMPILDGIKAGKIICKENLAGGVLL
LTSFEDKEYVEKAKSIGAYGYLVKTASEKSLIPTIEMCLNKVNEFEKMKKDLEKVNSKLNERKLVERAKGILIREFKISE
DEAYTRIRKLSMDKRTTMMEIAKMIIIGYDD

Sequences:

>Translated_191_residues
MGKKILLVDDEPLLRMDTKDILESHGYEIIGEASDGFEAVEMCKKHKPDLVIMDIEMPILDGIKAGKIICKENLAGGVLL
LTSFEDKEYVEKAKSIGAYGYLVKTASEKSLIPTIEMCLNKVNEFEKMKKDLEKVNSKLNERKLVERAKGILIREFKISE
DEAYTRIRKLSMDKRTTMMEIAKMIIIGYDD
>Mature_190_residues
GKKILLVDDEPLLRMDTKDILESHGYEIIGEASDGFEAVEMCKKHKPDLVIMDIEMPILDGIKAGKIICKENLAGGVLLL
TSFEDKEYVEKAKSIGAYGYLVKTASEKSLIPTIEMCLNKVNEFEKMKKDLEKVNSKLNERKLVERAKGILIREFKISED
EAYTRIRKLSMDKRTTMMEIAKMIIIGYDD

Specific function: Member of the two-component regulatory system pdtaR/pdtaS [H]

COG id: COG3707

COG function: function code T; Response regulator with putative antiterminator output domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788222, Length=113, Percent_Identity=34.5132743362832, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI87082052, Length=130, Percent_Identity=33.0769230769231, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1788712, Length=115, Percent_Identity=27.8260869565217, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1788521, Length=142, Percent_Identity=26.056338028169, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1788550, Length=138, Percent_Identity=28.2608695652174, Blast_Score=61, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005561
- InterPro:   IPR011006
- InterPro:   IPR008327
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03861 ANTAR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 21755; Mature: 21624

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: PS50921 ANTAR ; PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKKILLVDDEPLLRMDTKDILESHGYEIIGEASDGFEAVEMCKKHKPDLVIMDIEMPIL
CCCEEEEECCCCCEECCHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHH
DGIKAGKIICKENLAGGVLLLTSFEDKEYVEKAKSIGAYGYLVKTASEKSLIPTIEMCLN
CCCCCCCEEEECCCCCCEEEEEECCCHHHHHHHHHCCHHHEEEECCCCCCCCHHHHHHHH
KVNEFEKMKKDLEKVNSKLNERKLVERAKGILIREFKISEDEAYTRIRKLSMDKRTTMME
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHCCHHHHHHH
IAKMIIIGYDD
HHHHHHEECCC
>Mature Secondary Structure 
GKKILLVDDEPLLRMDTKDILESHGYEIIGEASDGFEAVEMCKKHKPDLVIMDIEMPIL
CCEEEEECCCCCEECCHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHH
DGIKAGKIICKENLAGGVLLLTSFEDKEYVEKAKSIGAYGYLVKTASEKSLIPTIEMCLN
CCCCCCCEEEECCCCCCEEEEEECCCHHHHHHHHHCCHHHEEEECCCCCCCCHHHHHHHH
KVNEFEKMKKDLEKVNSKLNERKLVERAKGILIREFKISEDEAYTRIRKLSMDKRTTMME
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHCCHHHHHHH
IAKMIIIGYDD
HHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]