| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is ade
Identifier: 126699428
GI number: 126699428
Start: 2102703
End: 2102879
Strand: Direct
Name: ade
Synonym: CD1820
Alternate gene names: 126699428
Gene position: 2102703-2102879 (Clockwise)
Preceding gene: 126699427
Following gene: 126699429
Centisome position: 49.01
GC content: 33.9
Gene sequence:
>3582_bases ATGGGTAATTTAAAAAGACAGTGTGATGTTTCAAGTGGAAGAGAAAAAGCTGACATTGTACTAAAAAATGGGACAATCAT AAATGTATTTACAGAAGAGTTAATAACAGGAGATGTAGCAATAGTAGGAGACACTATCGTTGGAATTGGCGATTACAAGG GCAATGTAGAAATTGATTAAAAAATAGCTACGCACACTCGGGACTTTAGTCATGAGTTAGTAGCTAAAATAGTCAGCATA TAGGGAAACCTATATGTAGAGATAGGATAGAACCTATCCAATACTACTTGAATTGCTGGAAACCCCTAAAGCTAATCAAA CTAAAACATAAGGATGAAATAAACCTAAGTGTGAAAGTTACGAAAGTAGAAAAAATTGGTTAGATGGTATAAGGTTAAAC CCTAAGTACTTTAAAATGGGCAATCAGCAGGTAAACTCCGAATAGGAGAAACTTCAACGACTATTCCTCTTGAGGGAAGT ACACTACAAGCTATTGGTAGTGGAAGTGGGTAGACCTTAACGGATAATGCTGAAGGATAAGATATAGTCTGTGCTTGCAT GAAAGTGTAAGAAGTTCATAAGAGAACTGCATAGGTAGTAGCGAACTTATGTGAACGACAACCTCAAAAATGATAAAAGT TAAGACTTACGGTTCTTAAATATGTTATTTAAAATTAAATATAAAACCTTCTAAATAATTGTTTTAAATAATTACATTTG TTAACATTATTATAGGTGATTAATAAATTGTTCACCACAGCATTATATAATATATTAAATATGATAAAATCATTAAAAAG TGTATCAAAAAACAATTAAAGTGAGGTGATAGTAGTGGAAAAAGCTTATAAGTTTAGAATGTATCCAAATAAAAAACAGC AAGAGTTAATTAACAAAACTTTTGGATGTTGTAGGTTTGTATATAATAAATATCTTGCTAAAAGAATAGATGTTTATAAA AACGATAAAGAAACTTTTACTTATAAACAGTGTAGTTCTGATTTGACCAATTTAAAAAAAGAATTAAATTGGCTTAAAGA ACCTGATAAATTTTCACTACAAAACGCCTTAAAAGATTTAGATAATGCATATAAAAAATTCTTTAAAGAAAAGGCAGGAT TTCCTAAATTTAAATCAAAGAAAATTAATAGATTTTCATATAAAACTAACTTTACAAATGGAAACATTATGTATTGTGGT CAACATATAAAACTACCTAAACTTGGTATGGTTAAGGTAAGGGATAAACAAGTACCTAAAGGGAGAATACTTAATGCTAC TATATCTAAAGAACCAAGTGGTAGATATTATGTATCATTATGCTGTACTGATGTAGATATTGAAGTATTTGAAAATACTA ATAATCATATAGGTTTAGATTTAGGAATTAAAGAATTTTGTATCTCAAGTTGTGGAGAATTTATAGAAAATCCTAAGTAT CTTAAGAAGTCATTAAACAAACTTGCTAAATTACAAAGAGAATTATCGAGAAAAACAATCGGTAGTTTAAATAGAAATAA AACAAGATTAAAAGTTGCAAGACTTCAAGAACATATAGCTAATCAAAGAAATGATTTTCTACAAAAACTATCTACTAAAT TAATAAAAGAGAACGATATTATTTGCATAGAAGATTTACAAGTAAAGAATATGATTAGAAATCGTAAACTATCTCGCTTA ATTTCTGATGTATCATGGTCAGAGTTTATTCGTCAATTAGAATACAAGGCTAATTGGCATGGTAGACAAATTGTAAAGGT AGGTAAATTCTTTGCAAGTTCACAAATATGTAATAAATGTGGGTATAAAAACGAGGAAGTGAAGGACTTAAATATAAGAG AATGGATTTGTCCTAGTTGTAATGAAACTCACGATAGAGATATAAATGCAAGTAGAAATATATTAAAAGAAGGATTAAGA TTAATAACGATTCAAAATAAATAACTTATGTAAGAACCGTAGGAACTACGGGGATAGCCTGTGGAGAATTAGTAAGACAT ATTTTAGTATGCAAAATTCTATGAAGCAGGAACCCTGTGACTTTAGTCATGGGAGGTTCAGTGTAGCAATAAATATATAT CACCTGGCTTTATTGATGCACATATGCATATTGAATCTACAATGGTAATGCCAATTGAATTATCGAAAAAATTATTAAAA TCAGGTACGACAACTATCATAGCCGACCCACATGAGTTGGTCAATGTAAAAGGAGTTAGTGCAATAGATTTTTTATTAGA ATCGACAAAAGATATACCACTTAATGTATATATTATGGTGCCTTCATCCGTACCTGCAACAAGTTTTGAAACTAATGGAG TTGGTAAATTTAGTGCAAAAGACATGGAGAGTTATGTAAATAATCCTAGAATTTTAGGTTTAGGAGAGGTAATGTGTTTT AATGATGTTATAAATTCTGAAAATGAAATCTTGGATAAACTAGAGCTTTTTAAAAATAAAGTTGTAGATGGACATGCACC TAATATAAATGGTAAATCACTTCAGACATATGTATGTGCAGGAATAGAAAATGACCATGAATGTATAACTTTTGATGAAG TATATGAAAAATTGAGAGCAGGATTAAAAATTTTAATAAGAGAAGGAAGCGCAGCAAAAAATTTAAAGTCTATAGTAAGT GGTATGCTAAAGCATAACTTGCCAATTGAAGAATTTATGTTTTGCACAGATGATAAGCACTTAGATGATATAGAAAAACA AGGTCACATAAGATGGAATATAAAATGTGCGATTGATTTAGGTATGGAACCTGTTAGGGCTATAAAAGTTGCAACTTATA ATTCTGCAAAAGCATATGGGTTAAGGAAAATTGGAGCAATAGGTGCGGGTTATAAGGCAGATATTGTTGTATTGAATGAT TTAGACAAAATGGAAGTGGATAGTGTATATAAAGATGGTAATTTGGTAAACGAAGAGATGTTTTCTAATTACAATTATGA GATTAAAGATAAAGAATTGCTTAATACAGTCAAGTTTAAATATATTAATAAAGAAAAAATACAGTTAAAAGTAAGTGAAA AAAATTATGTAATGGAGATTGTACCTTATCAAATTTTGACAAATAAGGTATATGAATCTTTACCATGTGCAGATGGATAT TTTGTTCCAAATAAAGAGTATTCAAAACTTTGTGTTGTTGAGAGACATAGAATGACTGGAAATGTAGCAATTGCTCCACT AAAAGGATTTGGCATAAAAAATGGAGCAATTGCTACTACTGTGGCCCATGATTCTCATAATATTATAGTTGCAGGGGATA ATGATGATGATATTCTAGTAGCTATAAATTACTTAAAGGAAATACAAGGTGGTTATGTAATTGTATCAAATGGAAAAGTT CTTGCACACCTAAGTCTTCAAGTAGCTGGATTAATTAGTACTTTTACAGCTGAAGAAGTACAAGAAATTACTGATAATAT GTTGGAGATAGCAAGAAAAATGGAAGTTCCAGAGTATGTAGACCCTTTTATTACACTTTCTTTTATGGCACTTCCAGTTG TTCCACAAATAAGACTTACAGATTTAGGTCTATTTGATGTTGAGGAATTTAAATTTATATAG
Upstream 100 bases:
>100_bases TTTCTATCAAAACTCATATATAATATATATTAATAAATTAAACTATAATACGTAATACAGTCAGTATATTGATATAAAAA ACTTAGGAGGAGTTGTAAAA
Downstream 100 bases:
>100_bases ATAGTATAAAAGTAATAATAAATGAGGCTTTCTCAAAATAGAGATAAGTCTCTTTTTATTGTTGAAATGATGAAAATATA TTTGATTTCATACAAAAAAG
Product: adenine deaminase
Products: NA
Alternate protein names: Adenase; Adenine aminase
Number of amino acids: Translated: 59; Mature: 58
Protein sequence:
>565_residues MGNLKRQCDVSSGREKADIVLKNGTIINVFTEELITGDVAIVGDTIVGIGDYKGNVEIDCSNKYISPGFIDAHMHIESTM VMPIELSKKLLKSGTTTIIADPHELVNVKGVSAIDFLLESTKDIPLNVYIMVPSSVPATSFETNGVGKFSAKDMESYVNN PRILGLGEVMCFNDVINSENEILDKLELFKNKVVDGHAPNINGKSLQTYVCAGIENDHECITFDEVYEKLRAGLKILIRE GSAAKNLKSIVSGMLKHNLPIEEFMFCTDDKHLDDIEKQGHIRWNIKCAIDLGMEPVRAIKVATYNSAKAYGLRKIGAIG AGYKADIVVLNDLDKMEVDSVYKDGNLVNEEMFSNYNYEIKDKELLNTVKFKYINKEKIQLKVSEKNYVMEIVPYQILTN KVYESLPCADGYFVPNKEYSKLCVVERHRMTGNVAIAPLKGFGIKNGAIATTVAHDSHNIIVAGDNDDDILVAINYLKEI QGGYVIVSNGKVLAHLSLQVAGLISTFTAEEVQEITDNMLEIARKMEVPEYVDPFITLSFMALPVVPQIRLTDLGLFDVE EFKFI
Sequences:
>Translated_59_residues MGNLKRQCDVSSGREKADIVLKNGTIINVFTEELITGDVAIVGDTIVGIGDYKGNVEID >Mature_58_residues GNLKRQCDVSSGREKADIVLKNGTIINVFTEELITGDVAIVGDTIVGIGDYKGNVEID
Specific function: Unknown
COG id: COG1001
COG function: function code F; Adenine deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenine deaminase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ADEC_CLOD6 (Q187C8)
Other databases:
- EMBL: AM180355 - RefSeq: YP_001088325.1 - ProteinModelPortal: Q187C8 - STRING: Q187C8 - GeneID: 4914746 - GenomeReviews: AM180355_GR - KEGG: cdf:CD1820 - NMPDR: fig|1496.1.peg.2983 - eggNOG: COG1001 - HOGENOM: HBG725357 - OMA: GKIITEH - ProtClustDB: CLSK721334 - HAMAP: MF_01518 - InterPro: IPR006679 - InterPro: IPR006680 - InterPro: IPR011059 - TIGRFAMs: TIGR01178
Pfam domain/function: PF01979 Amidohydro_1; SSF51338 Metalo_hydrolase
EC number: =3.5.4.2
Molecular weight: Translated: 6295; Mature: 6164
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNLKRQCDVSSGREKADIVLKNGTIINVFTEELITGDVAIVGDTIVGIGDYKGNVEID CCCCCCCCCCCCCCCCEEEEEECCCEEEEEECHHHCCCEEEECCEEEEECCCCCEEEEC >Mature Secondary Structure GNLKRQCDVSSGREKADIVLKNGTIINVFTEELITGDVAIVGDTIVGIGDYKGNVEID CCCCCCCCCCCCCCCEEEEEECCCEEEEEECHHHCCCEEEECCEEEEECCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA