Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699421

Identifier: 126699421

GI number: 126699421

Start: 2096270

End: 2096683

Strand: Direct

Name: 126699421

Synonym: CD1813

Alternate gene names: NA

Gene position: 2096270-2096683 (Clockwise)

Preceding gene: 126699420

Following gene: 126699422

Centisome position: 48.86

GC content: 25.12

Gene sequence:

>414_bases
ATGCTTGAATTAAAGAATAACTTAGGTATCAGTGAAAGAAAGTTAAAATATCCTTGTATCTATAAACATTTCAAAGGGAA
ATATTATGCTACAATGGGTCTTAGCAAGGCTATTGATGATATAGAAAACATATGTGAAATATATGGTAAAGAAAATTTAA
TCCAAAACAGAAATAAATATAAATTAGTTATTAGACATACTGAAAGAGAAGAAGATATCTATGTTTATAGGGATTTAGAT
GGAAACTTTTATCATAAAAAAGAAGAAGATACTAATGATTTAGTTTTATACAAGACCTTATATGATGATACAGGAATATT
TGCAAGACCTTTGGATATGTTTTTAGAAAAAGTAGATACAGATAAGTATGTCAATTCAATTCAAGAATACAGATTTGAAG
AAGTATATAAATAA

Upstream 100 bases:

>100_bases
TAATAAATTTTAAATTATGATAAAATATAAAACAAGTAACTTATTTCAGAATAAAATACTTTTTAAAAGAAAGGGACGAG
ATATGGGAGATTATAATAAA

Downstream 100 bases:

>100_bases
TATAAGAGAAATATGTTTATAAATTTAGAAAAATTCTTTAACAGTACAATAATTTGCAGAAATACAAATGAGATTTATTG
TAAATAATATGTTAGATTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MLELKNNLGISERKLKYPCIYKHFKGKYYATMGLSKAIDDIENICEIYGKENLIQNRNKYKLVIRHTEREEDIYVYRDLD
GNFYHKKEEDTNDLVLYKTLYDDTGIFARPLDMFLEKVDTDKYVNSIQEYRFEEVYK

Sequences:

>Translated_137_residues
MLELKNNLGISERKLKYPCIYKHFKGKYYATMGLSKAIDDIENICEIYGKENLIQNRNKYKLVIRHTEREEDIYVYRDLD
GNFYHKKEEDTNDLVLYKTLYDDTGIFARPLDMFLEKVDTDKYVNSIQEYRFEEVYK
>Mature_137_residues
MLELKNNLGISERKLKYPCIYKHFKGKYYATMGLSKAIDDIENICEIYGKENLIQNRNKYKLVIRHTEREEDIYVYRDLD
GNFYHKKEEDTNDLVLYKTLYDDTGIFARPLDMFLEKVDTDKYVNSIQEYRFEEVYK

Specific function: Unknown

COG id: COG4728

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16594; Mature: 16594

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELKNNLGISERKLKYPCIYKHFKGKYYATMGLSKAIDDIENICEIYGKENLIQNRNKY
CEECCCCCCCCCCCCCCCHHHHHHCCCEEEECCHHHHHHHHHHHHHHHCCHHHHCCCCCE
KLVIRHTEREEDIYVYRDLDGNFYHKKEEDTNDLVLYKTLYDDTGIFARPLDMFLEKVDT
EEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCH
DKYVNSIQEYRFEEVYK
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLELKNNLGISERKLKYPCIYKHFKGKYYATMGLSKAIDDIENICEIYGKENLIQNRNKY
CEECCCCCCCCCCCCCCCHHHHHHCCCEEEECCHHHHHHHHHHHHHHHCCHHHHCCCCCE
KLVIRHTEREEDIYVYRDLDGNFYHKKEEDTNDLVLYKTLYDDTGIFARPLDMFLEKVDT
EEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCH
DKYVNSIQEYRFEEVYK
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA