Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is artQ [H]

Identifier: 126699384

GI number: 126699384

Start: 2056678

End: 2057289

Strand: Direct

Name: artQ [H]

Synonym: CD1775

Alternate gene names: 126699384

Gene position: 2056678-2057289 (Clockwise)

Preceding gene: 126699383

Following gene: 126699385

Centisome position: 47.94

GC content: 28.27

Gene sequence:

>612_bases
ATGTTACAAGGTTTAGAGATAGTTATAGCAATGTTTTGTATAACATTGATAGTATCAATTCCATTGGGGATTGGAGTTGC
ATTTTTAAGATTATCAAAGAATAAATTAGTAAGTGGTATTACACAATGTTATATATTGATAATGAGAGGTACACCTTTAC
TTTTGCAAATGATAGTCATATTTTACGGATTACCTCTTTTAGGAATTGTATTTGACAGATTTACAGCTGGAGTAGTAGCT
TTCTTCTTAAATTATGCAGCATATTTTGCAGAAATATTTAGAGGTGGAATACAGTCAATCGATAGAGGACAATATGAAGC
TTCAAAAGTACTAGGATTTGATAAGTTTACTATGTATAAGAGAGTAATCTTTCCACAAGTTTTTAAAAGAATACTAGCAC
CTATTTCAAATGAAGTAATCACATTAGTAAAAGATACATCTTTAGTATATATATTAGGATTAAATGATATTTTAAGAATA
TCTCAAATAGCAATGAACAGGGAAGCAAGTCTGTTACCATTATTTGAGGCAGGAGCGATATATCTTATATTTGTAGCTAT
ACTTACTAAGGGATTTGAATTACTTGAAAAAAAATATTCTTATTATAGATAA

Upstream 100 bases:

>100_bases
ACATTAAAAGAAATGAAAAAAGATGGAACTTTTGACAAAATTTATGATAAGTGGTTTAAATAGAAGATAAGTTAGCTGTT
AAGAAGGGGGCACTAAAGGC

Downstream 100 bases:

>100_bases
AGTTACAATATTATAGGAGGAGGTTTTTTATATGTTGAAAATCAAAAACTTAAATAAATCATTTAAAAAAAATAGAGTAC
TTAAAGATATTTCTTTTGAG

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MLQGLEIVIAMFCITLIVSIPLGIGVAFLRLSKNKLVSGITQCYILIMRGTPLLLQMIVIFYGLPLLGIVFDRFTAGVVA
FFLNYAAYFAEIFRGGIQSIDRGQYEASKVLGFDKFTMYKRVIFPQVFKRILAPISNEVITLVKDTSLVYILGLNDILRI
SQIAMNREASLLPLFEAGAIYLIFVAILTKGFELLEKKYSYYR

Sequences:

>Translated_203_residues
MLQGLEIVIAMFCITLIVSIPLGIGVAFLRLSKNKLVSGITQCYILIMRGTPLLLQMIVIFYGLPLLGIVFDRFTAGVVA
FFLNYAAYFAEIFRGGIQSIDRGQYEASKVLGFDKFTMYKRVIFPQVFKRILAPISNEVITLVKDTSLVYILGLNDILRI
SQIAMNREASLLPLFEAGAIYLIFVAILTKGFELLEKKYSYYR
>Mature_203_residues
MLQGLEIVIAMFCITLIVSIPLGIGVAFLRLSKNKLVSGITQCYILIMRGTPLLLQMIVIFYGLPLLGIVFDRFTAGVVA
FFLNYAAYFAEIFRGGIQSIDRGQYEASKVLGFDKFTMYKRVIFPQVFKRILAPISNEVITLVKDTSLVYILGLNDILRI
SQIAMNREASLLPLFEAGAIYLIFVAILTKGFELLEKKYSYYR

Specific function: Part of a binding-protein-dependent transport system for arginine. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=169, Percent_Identity=38.4615384615385, Blast_Score=123, Evalue=7e-30,
Organism=Escherichia coli, GI1788646, Length=214, Percent_Identity=30.8411214953271, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI1787030, Length=203, Percent_Identity=31.5270935960591, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1787086, Length=208, Percent_Identity=30.2884615384615, Blast_Score=98, Evalue=3e-22,
Organism=Escherichia coli, GI1788645, Length=209, Percent_Identity=31.5789473684211, Blast_Score=94, Evalue=6e-21,
Organism=Escherichia coli, GI1786873, Length=178, Percent_Identity=32.0224719101124, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI87082239, Length=207, Percent_Identity=32.3671497584541, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1787087, Length=202, Percent_Identity=27.7227722772277, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI1786874, Length=168, Percent_Identity=27.3809523809524, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI48994930, Length=122, Percent_Identity=30.327868852459, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 22905; Mature: 22905

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQGLEIVIAMFCITLIVSIPLGIGVAFLRLSKNKLVSGITQCYILIMRGTPLLLQMIVI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
FYGLPLLGIVFDRFTAGVVAFFLNYAAYFAEIFRGGIQSIDRGQYEASKVLGFDKFTMYK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHH
RVIFPQVFKRILAPISNEVITLVKDTSLVYILGLNDILRISQIAMNREASLLPLFEAGAI
HHHHHHHHHHHHHHHCHHHHHEEECCCEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHH
YLIFVAILTKGFELLEKKYSYYR
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLQGLEIVIAMFCITLIVSIPLGIGVAFLRLSKNKLVSGITQCYILIMRGTPLLLQMIVI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
FYGLPLLGIVFDRFTAGVVAFFLNYAAYFAEIFRGGIQSIDRGQYEASKVLGFDKFTMYK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHH
RVIFPQVFKRILAPISNEVITLVKDTSLVYILGLNDILRISQIAMNREASLLPLFEAGAI
HHHHHHHHHHHHHHHCHHHHHEEECCCEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHH
YLIFVAILTKGFELLEKKYSYYR
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]