Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699369

Identifier: 126699369

GI number: 126699369

Start: 2038727

End: 2039488

Strand: Direct

Name: 126699369

Synonym: CD1760

Alternate gene names: NA

Gene position: 2038727-2039488 (Clockwise)

Preceding gene: 126699368

Following gene: 126699370

Centisome position: 47.52

GC content: 28.08

Gene sequence:

>762_bases
ATGATAGGAATATATTTTAGTGGAACAGGAAATTCAAGATACTGTGTAGAAAAATTTTTACAAGAATATGATATAACAGC
AAATTCTTATTCTATTGAAGATAATGAACTTTTACAGCACATCAATAATCATGAGAATATTATTTTTAGTTATCCTGTGC
AATATAGTAATGTGCCAAAAATATTGAAAGATTTTATAATAAATCATTCAACTTTGTGGAATGGTAAACGTGTTTTTATT
ATTGCAACTATGGCTCTATTTAGTGGAGATGGCTCTGGTGTGTTAGCTAGAATATTAAAAAAATACGGTGCTATAACTGT
TGGTGGATTACATGTGAAGATGCCAGATAGTATAGGAGATGAAAAGGTATTAAAACATTCTTTAGAGTATAATAGAAAGC
TTGTAATAAAAGCAGAAAAGAAAGTAACTAAAGCTGCTAAAAAACTGAAACATGGGTCACCACCAAAAGAAGGGTTGGGT
TTTTTGAGTCATATTGTAGGGTTATTTGGACAACGATTGTATTTTATCAATAAAACAAATATGTATACAGATAAACTAAA
AATTAATACTGAGGAATGTATTGTATGTGGTAAATGTGTTAATTTATGTCCAATGAAGAATCTAGTAATTAAAAATTGTA
TGATTGTTGCAAATGGGCAATGTACAATGTGTTATCGTTGTGTAAATAATTGTGCCAAAAAAGCAATTACATTGTTAGGT
AAAAAAGTTGTTGAACAGAGTAATATTAAAAAATATATGTAA

Upstream 100 bases:

>100_bases
TAAGTTTATATTATTTAAATAAACTACTTAATTTAGATAATATAAAAAGTCAGAATTTTAAGAATAGAGCTATATAATCT
TAGCTATTAGGAGAAGTACT

Downstream 100 bases:

>100_bases
GAAATTTAAAGTTTTATTGAATGTAAATTGATGTATATTTTATGTTAGAAAGAGAGGTTAAATAATGGAATACTACATAG
TTGATTCATTTGCAACTAAA

Product: iron-sulfur protein

Products: NA

Alternate protein names: Iron-Sulfur Protein; Flavodoxin

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MIGIYFSGTGNSRYCVEKFLQEYDITANSYSIEDNELLQHINNHENIIFSYPVQYSNVPKILKDFIINHSTLWNGKRVFI
IATMALFSGDGSGVLARILKKYGAITVGGLHVKMPDSIGDEKVLKHSLEYNRKLVIKAEKKVTKAAKKLKHGSPPKEGLG
FLSHIVGLFGQRLYFINKTNMYTDKLKINTEECIVCGKCVNLCPMKNLVIKNCMIVANGQCTMCYRCVNNCAKKAITLLG
KKVVEQSNIKKYM

Sequences:

>Translated_253_residues
MIGIYFSGTGNSRYCVEKFLQEYDITANSYSIEDNELLQHINNHENIIFSYPVQYSNVPKILKDFIINHSTLWNGKRVFI
IATMALFSGDGSGVLARILKKYGAITVGGLHVKMPDSIGDEKVLKHSLEYNRKLVIKAEKKVTKAAKKLKHGSPPKEGLG
FLSHIVGLFGQRLYFINKTNMYTDKLKINTEECIVCGKCVNLCPMKNLVIKNCMIVANGQCTMCYRCVNNCAKKAITLLG
KKVVEQSNIKKYM
>Mature_253_residues
MIGIYFSGTGNSRYCVEKFLQEYDITANSYSIEDNELLQHINNHENIIFSYPVQYSNVPKILKDFIINHSTLWNGKRVFI
IATMALFSGDGSGVLARILKKYGAITVGGLHVKMPDSIGDEKVLKHSLEYNRKLVIKAEKKVTKAAKKLKHGSPPKEGLG
FLSHIVGLFGQRLYFINKTNMYTDKLKINTEECIVCGKCVNLCPMKNLVIKNCMIVANGQCTMCYRCVNNCAKKAITLLG
KKVVEQSNIKKYM

Specific function: Unknown

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28486; Mature: 28486

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGIYFSGTGNSRYCVEKFLQEYDITANSYSIEDNELLQHINNHENIIFSYPVQYSNVPK
CEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCHHH
ILKDFIINHSTLWNGKRVFIIATMALFSGDGSGVLARILKKYGAITVGGLHVKMPDSIGD
HHHHHHCCCCEECCCCEEEEEEEEHHHCCCCCHHHHHHHHHHCCEEECEEEEECCCCCCH
EKVLKHSLEYNRKLVIKAEKKVTKAAKKLKHGSPPKEGLGFLSHIVGLFGQRLYFINKTN
HHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEEECCC
MYTDKLKINTEECIVCGKCVNLCPMKNLVIKNCMIVANGQCTMCYRCVNNCAKKAITLLG
EEECEEEECHHHHEEHHHHHHHCCHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHH
KKVVEQSNIKKYM
HHHHHHHHHHCCC
>Mature Secondary Structure
MIGIYFSGTGNSRYCVEKFLQEYDITANSYSIEDNELLQHINNHENIIFSYPVQYSNVPK
CEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCHHH
ILKDFIINHSTLWNGKRVFIIATMALFSGDGSGVLARILKKYGAITVGGLHVKMPDSIGD
HHHHHHCCCCEECCCCEEEEEEEEHHHCCCCCHHHHHHHHHHCCEEECEEEEECCCCCCH
EKVLKHSLEYNRKLVIKAEKKVTKAAKKLKHGSPPKEGLGFLSHIVGLFGQRLYFINKTN
HHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEEECCC
MYTDKLKINTEECIVCGKCVNLCPMKNLVIKNCMIVANGQCTMCYRCVNNCAKKAITLLG
EEECEEEECHHHHEEHHHHHHHCCHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHH
KKVVEQSNIKKYM
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA