| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699367
Identifier: 126699367
GI number: 126699367
Start: 2036847
End: 2037677
Strand: Direct
Name: 126699367
Synonym: CD1759
Alternate gene names: NA
Gene position: 2036847-2037677 (Clockwise)
Preceding gene: 126699366
Following gene: 126699368
Centisome position: 47.48
GC content: 26.11
Gene sequence:
>831_bases TTGTTAAACAAATTATGTATGTATTTAGAAAGACCAGAGCTTTATAAACAAAGTGAAATTAATTTTTGGGATGATGAGTA TATTTCAAAGCAATTATTAAAAGCACACTTAGACACTAATTTTGAAGGAGCAAGTAGAAATTTTAACTTTATCGAGGATT CTGTAAATTGGATAGTTACAGTTGCAAATCCAGCTAATTATCCTAAATTACTTGATTTAGGTTGTGGTCCAGGTTTATAT GCAGAGAAATTTGCACAAAAAGGTTATAAGGTAACTGGAATTGATTTCTCAAAACGTTCTATTAACTATGCACAAAATAG AAATAAGGAGACTAATTTAAACATAAATTACTTGTTCCAAAGTTATTTAAATATGAACTATAATGAGGAATTTGATTTGG CTACCTTAATTTATTGTGATTATGGAGCTTTGTCAACTGAAAATAGAAGGTTATTAATGGAAAAAATTTATGATAGTTTA AAACCTGGAGGAAAATTAATATTAGATGTATTTACAATAAATAAATACAATAATTTTGAGGAAATTAAATATTGGGAAAT AAATGAAGATGGAGGATTTTGGAGTAATGAAAAATATATGTGTCTACAAGATAATTGTAAATACAATGATTATAATACAT TAGAGCAAACTCTTGTAATAACCGAAAAAGATGAAAATGTATTTTATGTTTGGAATCACTATTTTTCAAAAGAAAGTTTC TTATTAGAAGTTGAAAATATTGGATTTAAGTCTGTTGAGTTTTTTAGTAATGTTAAGGGTGAAGCATATTCTGACGATAG TATGACTATGGGATTAGTTTTACAAAAATAA
Upstream 100 bases:
>100_bases CTATTTTACTCTTATTTAAACTCATCTTTTTGAAGTTAAACCACAGAGTAAACTCTGTGGTTTTTTTATTTTAAAAATAA ATTTTAAGGAGTGGTATGTT
Downstream 100 bases:
>100_bases TAATTTTTTTTAAAATAAATAAATAAAAACTTGAAACCTTTAACAATAAAATAACATAAGAAAAGCTTACATATTGAAAA ATGGAAACTTTTATGTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase; SAM-Dependent Methyltransferase; Methyltransferase Domain Protein; Cyclopropane-Fatty-Acyl-Phospholipid Synthase Superfamily; Methyltransferase Family Protein; SAM-Dependent Methyltransferase UbiE/COQ5 Family; DNA Methyltransferase; UbiE/COQ5-Like Methyltransferase; SAM Dependant Methyltransferase Family Protein
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MLNKLCMYLERPELYKQSEINFWDDEYISKQLLKAHLDTNFEGASRNFNFIEDSVNWIVTVANPANYPKLLDLGCGPGLY AEKFAQKGYKVTGIDFSKRSINYAQNRNKETNLNINYLFQSYLNMNYNEEFDLATLIYCDYGALSTENRRLLMEKIYDSL KPGGKLILDVFTINKYNNFEEIKYWEINEDGGFWSNEKYMCLQDNCKYNDYNTLEQTLVITEKDENVFYVWNHYFSKESF LLEVENIGFKSVEFFSNVKGEAYSDDSMTMGLVLQK
Sequences:
>Translated_276_residues MLNKLCMYLERPELYKQSEINFWDDEYISKQLLKAHLDTNFEGASRNFNFIEDSVNWIVTVANPANYPKLLDLGCGPGLY AEKFAQKGYKVTGIDFSKRSINYAQNRNKETNLNINYLFQSYLNMNYNEEFDLATLIYCDYGALSTENRRLLMEKIYDSL KPGGKLILDVFTINKYNNFEEIKYWEINEDGGFWSNEKYMCLQDNCKYNDYNTLEQTLVITEKDENVFYVWNHYFSKESF LLEVENIGFKSVEFFSNVKGEAYSDDSMTMGLVLQK >Mature_276_residues MLNKLCMYLERPELYKQSEINFWDDEYISKQLLKAHLDTNFEGASRNFNFIEDSVNWIVTVANPANYPKLLDLGCGPGLY AEKFAQKGYKVTGIDFSKRSINYAQNRNKETNLNINYLFQSYLNMNYNEEFDLATLIYCDYGALSTENRRLLMEKIYDSL KPGGKLILDVFTINKYNNFEEIKYWEINEDGGFWSNEKYMCLQDNCKYNDYNTLEQTLVITEKDENVFYVWNHYFSKESF LLEVENIGFKSVEFFSNVKGEAYSDDSMTMGLVLQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32530; Mature: 32530
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNKLCMYLERPELYKQSEINFWDDEYISKQLLKAHLDTNFEGASRNFNFIEDSVNWIVT CCCHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEE VANPANYPKLLDLGCGPGLYAEKFAQKGYKVTGIDFSKRSINYAQNRNKETNLNINYLFQ ECCCCCCCEEEECCCCCCHHHHHHHHCCCEEEEECCCCCCCCHHHCCCCCCCCCHHEEEH SYLNMNYNEEFDLATLIYCDYGALSTENRRLLMEKIYDSLKPGGKLILDVFTINKYNNFE HHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCC EIKYWEINEDGGFWSNEKYMCLQDNCKYNDYNTLEQTLVITEKDENVFYVWNHYFSKESF CEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCEE LLEVENIGFKSVEFFSNVKGEAYSDDSMTMGLVLQK EEEEECCCCHHHHHHHCCCCCEECCCCEEEEEEEEC >Mature Secondary Structure MLNKLCMYLERPELYKQSEINFWDDEYISKQLLKAHLDTNFEGASRNFNFIEDSVNWIVT CCCHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEE VANPANYPKLLDLGCGPGLYAEKFAQKGYKVTGIDFSKRSINYAQNRNKETNLNINYLFQ ECCCCCCCEEEECCCCCCHHHHHHHHCCCEEEEECCCCCCCCHHHCCCCCCCCCHHEEEH SYLNMNYNEEFDLATLIYCDYGALSTENRRLLMEKIYDSLKPGGKLILDVFTINKYNNFE HHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCC EIKYWEINEDGGFWSNEKYMCLQDNCKYNDYNTLEQTLVITEKDENVFYVWNHYFSKESF CEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCEE LLEVENIGFKSVEFFSNVKGEAYSDDSMTMGLVLQK EEEEECCCCHHHHHHHCCCCCEECCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA