| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699365
Identifier: 126699365
GI number: 126699365
Start: 2035082
End: 2035543
Strand: Direct
Name: 126699365
Synonym: CD1757
Alternate gene names: NA
Gene position: 2035082-2035543 (Clockwise)
Preceding gene: 126699364
Following gene: 126699366
Centisome position: 47.44
GC content: 22.73
Gene sequence:
>462_bases ATGAGATTATGGCATAAGGATTTAATTGATGTATTACCTAAAAATCAATTAGTAAGTCAATGGAGAGAGCTACTTGCTAT AAAAGGTTCTATAGATAAAAAAGGTACTCCAAACCATCTATTAGTGAATAAAGTATTGAATTATAGTATAGATGAATTTA AATTTTATACAAAAATTGTACATGATGAAATGTTAAAAAGAAATTATAAACCTAATGAACTTAAATATACAAGTATATTA AAATGGAAAAATAGAAATTTTGCAAATGATATATCTAATGAACATAGTTTAAATTTAGAAAATTTATATGATGATTGGCA TAATAAAATGTATTTAAAGCAATGCTTATATAATTTAGAAGAAAAAGCAACATGTGGAGGAATACCAATAAATGAATGGA ATATATTACTTTGTAAATATAGTAAAGATTATGAATTGTGGTCTGGAAATATCATGTTTTAA
Upstream 100 bases:
>100_bases AAATGGTATAGTTTTTACAGATAAAATTATTGAACATGTAAAATTGTAAGATAGATTGGTTATTGAATTTGTAAAATATT TTATAGTAAGGAGTTAAATT
Downstream 100 bases:
>100_bases TTACTATAGATTAACATTATAGTATTATTGTATATAAAGAGGTGATTATTTGTATAATAAAATAAAATATATTCCAATAA ATTGTGAAATAGCTTGTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MRLWHKDLIDVLPKNQLVSQWRELLAIKGSIDKKGTPNHLLVNKVLNYSIDEFKFYTKIVHDEMLKRNYKPNELKYTSIL KWKNRNFANDISNEHSLNLENLYDDWHNKMYLKQCLYNLEEKATCGGIPINEWNILLCKYSKDYELWSGNIMF
Sequences:
>Translated_153_residues MRLWHKDLIDVLPKNQLVSQWRELLAIKGSIDKKGTPNHLLVNKVLNYSIDEFKFYTKIVHDEMLKRNYKPNELKYTSIL KWKNRNFANDISNEHSLNLENLYDDWHNKMYLKQCLYNLEEKATCGGIPINEWNILLCKYSKDYELWSGNIMF >Mature_153_residues MRLWHKDLIDVLPKNQLVSQWRELLAIKGSIDKKGTPNHLLVNKVLNYSIDEFKFYTKIVHDEMLKRNYKPNELKYTSIL KWKNRNFANDISNEHSLNLENLYDDWHNKMYLKQCLYNLEEKATCGGIPINEWNILLCKYSKDYELWSGNIMF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18400; Mature: 18400
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLWHKDLIDVLPKNQLVSQWRELLAIKGSIDKKGTPNHLLVNKVLNYSIDEFKFYTKIV CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHH HDEMLKRNYKPNELKYTSILKWKNRNFANDISNEHSLNLENLYDDWHNKMYLKQCLYNLE HHHHHHCCCCCCCEEHHHHHEECCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH EKATCGGIPINEWNILLCKYSKDYELWSGNIMF HCCCCCCCCCCCCEEEEEEECCCCEECCCCCCC >Mature Secondary Structure MRLWHKDLIDVLPKNQLVSQWRELLAIKGSIDKKGTPNHLLVNKVLNYSIDEFKFYTKIV CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHH HDEMLKRNYKPNELKYTSILKWKNRNFANDISNEHSLNLENLYDDWHNKMYLKQCLYNLE HHHHHHCCCCCCCEEHHHHHEECCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH EKATCGGIPINEWNILLCKYSKDYELWSGNIMF HCCCCCCCCCCCCEEEEEEECCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA