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The map label for this gene is yjiM [H]

Identifier: 126699356

GI number: 126699356

Start: 2026038

End: 2027189

Strand: Direct

Name: yjiM [H]

Synonym: CD1749

Alternate gene names: 126699356

Gene position: 2026038-2027189 (Clockwise)

Preceding gene: 126699355

Following gene: 126699357

Centisome position: 47.22

GC content: 30.99

Gene sequence:

>1152_bases
ATGACAAATTTGCCAAAACAATTTGATAGCTTCAATGAAGCTAGACAAAAAGGATTTATAAATGCAAAGGAACTTAAGGA
AAGTGGGAAAAAGATGGTTGGAGTTTTCTGTACATTTACTCCAGTTGAAATTCCAATGGCAGCTGGAGCAACTGTAGTAG
GTGTATGCGGCGTTAGTGAAGAGCCAATACCTGATGCAGAAAGGGTGCTTCCAAGAAATCTTTGTCCTTTAATTAAATCA
AGCTATGGACATGCAATAACAGATACCTGTCCTTATTTCTATTTTTCTGATTTGTTGATAGGAGAAACCACTTGTGATGG
TAAGAAAAAAATGTATGAAGAACTTGCAAAAGTTAAGCCAACATATGTAATGCATTTGCCAAATACTTCAAAAGGAGAAT
TTGCCTATAAACTTTGGAAAGATGAAATGATAAGATTAAAAGAAGAGGTTGAGAAATCTTTAGGTGTAACTATAACTGAA
GAAGATATAAGAACTGCTATAAAAGATAAAAATGAAGAAAGAGAACTTTTAAAAGAGTTTTATGCACTTGGTAAATTACA
ACCATCTGCACTTACAGGCCTTGAGTTACATAATGTTTTATATCAAGCAGGTTTTAAATTTGACCGTGCAGAACTTAAAC
ATTCTTTAAGAAAAGTTATAGATGATATGAAAGAAAGATATGAAAAAGGTGAATGTCCTGTTCAAAAAGATAAGCCAAGA
ATATTGATAACAGGTTCTCCTATTGGTGGAATAAGCGAAAAAATAGTTAAAACTTTAGAAGATGCAGGGGCATCAGTCGT
TGCATATGAACTTTGTGGAGCTATTAGATCAAACGATTTATTGGTTGATGAAGAAATAGAAGATGTATATGATGCTTTAA
CACAAAAATATATAAATATAGGTTGTTCTTGTATGATGAATAATGACAATCGTATTGAATTATTAGATAGAATAATAGAT
GAATATAATGTAGATGCTGTAATAGATGTAGTTTTACAAGCATGTCATACATTTAATATAGAAAGTTATAGAATAAGAGA
ATTTGTTACAAAAGAAAAAAATAAGCCATTTATGTCTCTTGAAACTGATTATTCAAAATCAGATACTGAACAATTAAGAA
CTAGATTTGAAGCGTTTGTAGAGATGTTGTAG

Upstream 100 bases:

>100_bases
TTGTATTTTAATGGAAAAATTTAGTTTTTATTGCTTAAGATACAAATTGAATTACGAAGAGATTGAATTATGAAGAGAAG
TAATTGGGAGGAATATTTTC

Downstream 100 bases:

>100_bases
GAATAAATAAAAGTAGGAGGAACTATGTTTAGTATAGGAGTTGACTCAGGGTCAGTGGCAACAAAGGGTGTGCTATTTGA
TGGTGAAAAAATTATTAAGA

Product: 2-hydroxyacyl-CoA dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MTNLPKQFDSFNEARQKGFINAKELKESGKKMVGVFCTFTPVEIPMAAGATVVGVCGVSEEPIPDAERVLPRNLCPLIKS
SYGHAITDTCPYFYFSDLLIGETTCDGKKKMYEELAKVKPTYVMHLPNTSKGEFAYKLWKDEMIRLKEEVEKSLGVTITE
EDIRTAIKDKNEERELLKEFYALGKLQPSALTGLELHNVLYQAGFKFDRAELKHSLRKVIDDMKERYEKGECPVQKDKPR
ILITGSPIGGISEKIVKTLEDAGASVVAYELCGAIRSNDLLVDEEIEDVYDALTQKYINIGCSCMMNNDNRIELLDRIID
EYNVDAVIDVVLQACHTFNIESYRIREFVTKEKNKPFMSLETDYSKSDTEQLRTRFEAFVEML

Sequences:

>Translated_383_residues
MTNLPKQFDSFNEARQKGFINAKELKESGKKMVGVFCTFTPVEIPMAAGATVVGVCGVSEEPIPDAERVLPRNLCPLIKS
SYGHAITDTCPYFYFSDLLIGETTCDGKKKMYEELAKVKPTYVMHLPNTSKGEFAYKLWKDEMIRLKEEVEKSLGVTITE
EDIRTAIKDKNEERELLKEFYALGKLQPSALTGLELHNVLYQAGFKFDRAELKHSLRKVIDDMKERYEKGECPVQKDKPR
ILITGSPIGGISEKIVKTLEDAGASVVAYELCGAIRSNDLLVDEEIEDVYDALTQKYINIGCSCMMNNDNRIELLDRIID
EYNVDAVIDVVLQACHTFNIESYRIREFVTKEKNKPFMSLETDYSKSDTEQLRTRFEAFVEML
>Mature_382_residues
TNLPKQFDSFNEARQKGFINAKELKESGKKMVGVFCTFTPVEIPMAAGATVVGVCGVSEEPIPDAERVLPRNLCPLIKSS
YGHAITDTCPYFYFSDLLIGETTCDGKKKMYEELAKVKPTYVMHLPNTSKGEFAYKLWKDEMIRLKEEVEKSLGVTITEE
DIRTAIKDKNEERELLKEFYALGKLQPSALTGLELHNVLYQAGFKFDRAELKHSLRKVIDDMKERYEKGECPVQKDKPRI
LITGSPIGGISEKIVKTLEDAGASVVAYELCGAIRSNDLLVDEEIEDVYDALTQKYINIGCSCMMNNDNRIELLDRIIDE
YNVDAVIDVVLQACHTFNIESYRIREFVTKEKNKPFMSLETDYSKSDTEQLRTRFEAFVEML

Specific function: Unknown

COG id: COG1775

COG function: function code E; Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0007 [H]

Homologues:

Organism=Escherichia coli, GI87082427, Length=383, Percent_Identity=51.9582245430809, Blast_Score=419, Evalue=1e-118,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010327 [H]

Pfam domain/function: PF06050 HGD-D [H]

EC number: NA

Molecular weight: Translated: 43566; Mature: 43434

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNLPKQFDSFNEARQKGFINAKELKESGKKMVGVFCTFTPVEIPMAAGATVVGVCGVSE
CCCCCHHHHHHHHHHHHCCCCHHHHHHCCHHEEEEEEEECCCCCCHHCCCEEEEEECCCC
EPIPDAERVLPRNLCPLIKSSYGHAITDTCPYFYFSDLLIGETTCDGKKKMYEELAKVKP
CCCCCHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
TYVMHLPNTSKGEFAYKLWKDEMIRLKEEVEKSLGVTITEEDIRTAIKDKNEERELLKEF
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHCCCHHHHHHHHH
YALGKLQPSALTGLELHNVLYQAGFKFDRAELKHSLRKVIDDMKERYEKGECPVQKDKPR
HHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE
ILITGSPIGGISEKIVKTLEDAGASVVAYELCGAIRSNDLLVDEEIEDVYDALTQKYINI
EEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHC
GCSCMMNNDNRIELLDRIIDEYNVDAVIDVVLQACHTFNIESYRIREFVTKEKNKPFMSL
CCEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEE
ETDYSKSDTEQLRTRFEAFVEML
ECCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TNLPKQFDSFNEARQKGFINAKELKESGKKMVGVFCTFTPVEIPMAAGATVVGVCGVSE
CCCCHHHHHHHHHHHHCCCCHHHHHHCCHHEEEEEEEECCCCCCHHCCCEEEEEECCCC
EPIPDAERVLPRNLCPLIKSSYGHAITDTCPYFYFSDLLIGETTCDGKKKMYEELAKVKP
CCCCCHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
TYVMHLPNTSKGEFAYKLWKDEMIRLKEEVEKSLGVTITEEDIRTAIKDKNEERELLKEF
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHCCCHHHHHHHHH
YALGKLQPSALTGLELHNVLYQAGFKFDRAELKHSLRKVIDDMKERYEKGECPVQKDKPR
HHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE
ILITGSPIGGISEKIVKTLEDAGASVVAYELCGAIRSNDLLVDEEIEDVYDALTQKYINI
EEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHC
GCSCMMNNDNRIELLDRIIDEYNVDAVIDVVLQACHTFNIESYRIREFVTKEKNKPFMSL
CCEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEE
ETDYSKSDTEQLRTRFEAFVEML
ECCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]