Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699350

Identifier: 126699350

GI number: 126699350

Start: 2019650

End: 2021008

Strand: Direct

Name: 126699350

Synonym: CD1744

Alternate gene names: NA

Gene position: 2019650-2021008 (Clockwise)

Preceding gene: 126699349

Following gene: 126699351

Centisome position: 47.08

GC content: 23.91

Gene sequence:

>1359_bases
ATGATTAATTTATTTTCTTCCGATTTATTTTTAAAGTACAGTTTTTTCTTCTCTTTTATTGTATATAGAATTTTAATGGT
AATAGTGCAATACTATTTTCTAATCAATTTTACAAATTTTAATTCAAAATTTTGGTGTTTTATTTTATATTCGATAATTT
CAATTTTTTTAATCATTATAAATACATATTTTAATTTATATAATTTATTTTCTTCACAGATTCTATTTTTTCTTATGACT
TTTTTATTTGTAAAGTACATAATAAAACAATCTACTGTTTTATCTATAGTATCAACTTTGTTAGTATATTTAATTGAACA
ATTAGTATATGGATTTACAGCTCCATTAAATTACTTGATATTTACTAGTGATATAAATACAGATATTTATAAATTTGATA
TAAATATGGGACTATCTTCTTTAATTACTATTATAATAGCTGGATTTATATATTGGTATAGTTCTAAAAAGTTTAATATT
AAGGTCATGAACTTTGATAAATATATAGCAATTTTGATGATTCCATTGTTGCTTATAATATTATTTATGCAATCATTTGA
ATATAGTTCAAATATAAATATAGATACAAGTCTTGGGATTGTAAAGCTGCTATTAAATACTTCTATAACTGAAGAAATTC
AAGCTTTTCTTTTTTCTATAATTGGAACTATATGTGTATTTTTTTCTCTATTTACCTTTAAGAAACTAATTCAAGCTCTC
GAAGATGACAAGGAGAGGGCAATTATGAATCAACAGATTCATGCTCAAAAAAACTATATTGAAGAAGCGAAATCACGATT
ATCACAAACTATATCCTTTAGACATGATTTTAATAATCATTTAGCTATTGTCAATGGATTGTTGAAAAAAGACCAAATTT
TAAAAGCACAAGATTATTTAAATAAGCTTGAAAAAGTAACAAGTGACCTATCATTTTCTTGTAATACACAGAATATTGTT
ATTGATGCTCTTTTCAACAATAAATTAAGTATAGCAAAACAATTAGGCATAGAGGTAGATTGTGAAGTAATTATACCCCA
AAGCACTAACATGAACGATTTTGACCTATGTATAGTGTTTGCTAATGCTATTGACAATGCAATTAAAGCTTGTAGAGTTG
TAGATAAACAAAATAGGTATTTAAAGCTTTCCACTAAGTTAGAGGGTGGATTTTTTATGATAGAAATAAAAAATAGCTAT
AATCTAATAAATAATTATACAAGTGGCTCAGGTATAGGTCTTTTAAATATAAAAGAAATTGCTAAAAAATATCAAGGGGC
TATAAGTATAGATAAGACATCAGACTATTTTCAAATAAATGTATTGCTAGTTATTTCATTACATTGCGCTAGTATTTGA

Upstream 100 bases:

>100_bases
GCAGTTATGGAAAGTGGAGATAGAATACCTGTTTCTAGACTACGTCAACAAATATTTTCAAAAGTTATGCTTGAGTTCAT
GAAAAATAGGAGGATATAAG

Downstream 100 bases:

>100_bases
GAACAATTTCATTGAAAATGGTATTTGTAAGCTATATTATGTACTTGAATAGAGAAAGTTTGATATATAGAAATGAGGAG
GTTACTAAAATGAAAGTTGG

Product: two-component sensor histidine kinase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MINLFSSDLFLKYSFFFSFIVYRILMVIVQYYFLINFTNFNSKFWCFILYSIISIFLIIINTYFNLYNLFSSQILFFLMT
FLFVKYIIKQSTVLSIVSTLLVYLIEQLVYGFTAPLNYLIFTSDINTDIYKFDINMGLSSLITIIIAGFIYWYSSKKFNI
KVMNFDKYIAILMIPLLLIILFMQSFEYSSNINIDTSLGIVKLLLNTSITEEIQAFLFSIIGTICVFFSLFTFKKLIQAL
EDDKERAIMNQQIHAQKNYIEEAKSRLSQTISFRHDFNNHLAIVNGLLKKDQILKAQDYLNKLEKVTSDLSFSCNTQNIV
IDALFNNKLSIAKQLGIEVDCEVIIPQSTNMNDFDLCIVFANAIDNAIKACRVVDKQNRYLKLSTKLEGGFFMIEIKNSY
NLINNYTSGSGIGLLNIKEIAKKYQGAISIDKTSDYFQINVLLVISLHCASI

Sequences:

>Translated_452_residues
MINLFSSDLFLKYSFFFSFIVYRILMVIVQYYFLINFTNFNSKFWCFILYSIISIFLIIINTYFNLYNLFSSQILFFLMT
FLFVKYIIKQSTVLSIVSTLLVYLIEQLVYGFTAPLNYLIFTSDINTDIYKFDINMGLSSLITIIIAGFIYWYSSKKFNI
KVMNFDKYIAILMIPLLLIILFMQSFEYSSNINIDTSLGIVKLLLNTSITEEIQAFLFSIIGTICVFFSLFTFKKLIQAL
EDDKERAIMNQQIHAQKNYIEEAKSRLSQTISFRHDFNNHLAIVNGLLKKDQILKAQDYLNKLEKVTSDLSFSCNTQNIV
IDALFNNKLSIAKQLGIEVDCEVIIPQSTNMNDFDLCIVFANAIDNAIKACRVVDKQNRYLKLSTKLEGGFFMIEIKNSY
NLINNYTSGSGIGLLNIKEIAKKYQGAISIDKTSDYFQINVLLVISLHCASI
>Mature_452_residues
MINLFSSDLFLKYSFFFSFIVYRILMVIVQYYFLINFTNFNSKFWCFILYSIISIFLIIINTYFNLYNLFSSQILFFLMT
FLFVKYIIKQSTVLSIVSTLLVYLIEQLVYGFTAPLNYLIFTSDINTDIYKFDINMGLSSLITIIIAGFIYWYSSKKFNI
KVMNFDKYIAILMIPLLLIILFMQSFEYSSNINIDTSLGIVKLLLNTSITEEIQAFLFSIIGTICVFFSLFTFKKLIQAL
EDDKERAIMNQQIHAQKNYIEEAKSRLSQTISFRHDFNNHLAIVNGLLKKDQILKAQDYLNKLEKVTSDLSFSCNTQNIV
IDALFNNKLSIAKQLGIEVDCEVIIPQSTNMNDFDLCIVFANAIDNAIKACRVVDKQNRYLKLSTKLEGGFFMIEIKNSY
NLINNYTSGSGIGLLNIKEIAKKYQGAISIDKTSDYFQINVLLVISLHCASI

Specific function: Unknown

COG id: COG2972

COG function: function code T; Predicted signal transduction protein with a C-terminal ATPase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52200; Mature: 52200

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINLFSSDLFLKYSFFFSFIVYRILMVIVQYYFLINFTNFNSKFWCFILYSIISIFLIII
CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHH
NTYFNLYNLFSSQILFFLMTFLFVKYIIKQSTVLSIVSTLLVYLIEQLVYGFTAPLNYLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
FTSDINTDIYKFDINMGLSSLITIIIAGFIYWYSSKKFNIKVMNFDKYIAILMIPLLLII
EEECCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHH
LFMQSFEYSSNINIDTSLGIVKLLLNTSITEEIQAFLFSIIGTICVFFSLFTFKKLIQAL
HHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDDKERAIMNQQIHAQKNYIEEAKSRLSQTISFRHDFNNHLAIVNGLLKKDQILKAQDYL
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
NKLEKVTSDLSFSCNTQNIVIDALFNNKLSIAKQLGIEVDCEVIIPQSTNMNDFDLCIVF
HHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHH
ANAIDNAIKACRVVDKQNRYLKLSTKLEGGFFMIEIKNSYNLINNYTSGSGIGLLNIKEI
HHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEECCCCHHHHCCCCCCCEEEEEHHHH
AKKYQGAISIDKTSDYFQINVLLVISLHCASI
HHHHCCCEEEECCCCEEEEEEEEEEEEHHHCC
>Mature Secondary Structure
MINLFSSDLFLKYSFFFSFIVYRILMVIVQYYFLINFTNFNSKFWCFILYSIISIFLIII
CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHH
NTYFNLYNLFSSQILFFLMTFLFVKYIIKQSTVLSIVSTLLVYLIEQLVYGFTAPLNYLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
FTSDINTDIYKFDINMGLSSLITIIIAGFIYWYSSKKFNIKVMNFDKYIAILMIPLLLII
EEECCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHH
LFMQSFEYSSNINIDTSLGIVKLLLNTSITEEIQAFLFSIIGTICVFFSLFTFKKLIQAL
HHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDDKERAIMNQQIHAQKNYIEEAKSRLSQTISFRHDFNNHLAIVNGLLKKDQILKAQDYL
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
NKLEKVTSDLSFSCNTQNIVIDALFNNKLSIAKQLGIEVDCEVIIPQSTNMNDFDLCIVF
HHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHH
ANAIDNAIKACRVVDKQNRYLKLSTKLEGGFFMIEIKNSYNLINNYTSGSGIGLLNIKEI
HHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEECCCCHHHHCCCCCCCEEEEEHHHH
AKKYQGAISIDKTSDYFQINVLLVISLHCASI
HHHHCCCEEEECCCCEEEEEEEEEEEEHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA