Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699317

Identifier: 126699317

GI number: 126699317

Start: 1985501

End: 1985872

Strand: Direct

Name: 126699317

Synonym: CD1710

Alternate gene names: NA

Gene position: 1985501-1985872 (Clockwise)

Preceding gene: 126699316

Following gene: 126699318

Centisome position: 46.28

GC content: 25.27

Gene sequence:

>372_bases
ATGAATTTACTTAAATGCGATTCTTGGGCAGTAATATTAAATAATAGCGATAAAGAAAGTAAAGCATATAAAATATTAGA
TGAACTTAAAAGGAATATGTACAAAGTTGTTGCTATAGATGAAGAGAAAAAACCTATTGAAGGAATAGATGTGTATGAAT
GTTTAAAAGATGTTCCACACAATATTGATGTTGTAGCTATTATTGATAAACAATCTAAGATGGATGTGATTTTAGAAGAA
GTAGAGCTTTTGGATATACAAAATATGTGGTTTGAAAAAGGAAGCTTTAGTGAAATGATGATTAAAAAGACTAAAGATTT
AAAATTAAATATAGAATATAATTTAAGTTTATATGATGAGTTGACTAGATAA

Upstream 100 bases:

>100_bases
TATTTTTAAATGTAAACACTGTTGATGAGTATAAAAAATTAACTAAAGTTTAATTAGCTATGGTTGTAAAATAGAGTAGG
ATTTATATGGAGGAGAGTTT

Downstream 100 bases:

>100_bases
AATTATATTTCTTAATAATAAAAATATAATTAGTTAATAAAACATATTATTTTATAGTATAGATTGGTTAATAAAAGTAC
AGATTGGTTAATGAAACATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MNLLKCDSWAVILNNSDKESKAYKILDELKRNMYKVVAIDEEKKPIEGIDVYECLKDVPHNIDVVAIIDKQSKMDVILEE
VELLDIQNMWFEKGSFSEMMIKKTKDLKLNIEYNLSLYDELTR

Sequences:

>Translated_123_residues
MNLLKCDSWAVILNNSDKESKAYKILDELKRNMYKVVAIDEEKKPIEGIDVYECLKDVPHNIDVVAIIDKQSKMDVILEE
VELLDIQNMWFEKGSFSEMMIKKTKDLKLNIEYNLSLYDELTR
>Mature_123_residues
MNLLKCDSWAVILNNSDKESKAYKILDELKRNMYKVVAIDEEKKPIEGIDVYECLKDVPHNIDVVAIIDKQSKMDVILEE
VELLDIQNMWFEKGSFSEMMIKKTKDLKLNIEYNLSLYDELTR

Specific function: Unknown

COG id: COG1832

COG function: function code R; Predicted CoA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14462; Mature: 14462

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLKCDSWAVILNNSDKESKAYKILDELKRNMYKVVAIDEEKKPIEGIDVYECLKDVPH
CCCEECCCEEEEEECCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHCCC
NIDVVAIIDKQSKMDVILEEVELLDIQNMWFEKGSFSEMMIKKTKDLKLNIEYNLSLYDE
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEEECEEHHHH
LTR
HCC
>Mature Secondary Structure
MNLLKCDSWAVILNNSDKESKAYKILDELKRNMYKVVAIDEEKKPIEGIDVYECLKDVPH
CCCEECCCEEEEEECCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHCCC
NIDVVAIIDKQSKMDVILEEVELLDIQNMWFEKGSFSEMMIKKTKDLKLNIEYNLSLYDE
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEEECEEHHHH
LTR
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA