| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699317
Identifier: 126699317
GI number: 126699317
Start: 1985501
End: 1985872
Strand: Direct
Name: 126699317
Synonym: CD1710
Alternate gene names: NA
Gene position: 1985501-1985872 (Clockwise)
Preceding gene: 126699316
Following gene: 126699318
Centisome position: 46.28
GC content: 25.27
Gene sequence:
>372_bases ATGAATTTACTTAAATGCGATTCTTGGGCAGTAATATTAAATAATAGCGATAAAGAAAGTAAAGCATATAAAATATTAGA TGAACTTAAAAGGAATATGTACAAAGTTGTTGCTATAGATGAAGAGAAAAAACCTATTGAAGGAATAGATGTGTATGAAT GTTTAAAAGATGTTCCACACAATATTGATGTTGTAGCTATTATTGATAAACAATCTAAGATGGATGTGATTTTAGAAGAA GTAGAGCTTTTGGATATACAAAATATGTGGTTTGAAAAAGGAAGCTTTAGTGAAATGATGATTAAAAAGACTAAAGATTT AAAATTAAATATAGAATATAATTTAAGTTTATATGATGAGTTGACTAGATAA
Upstream 100 bases:
>100_bases TATTTTTAAATGTAAACACTGTTGATGAGTATAAAAAATTAACTAAAGTTTAATTAGCTATGGTTGTAAAATAGAGTAGG ATTTATATGGAGGAGAGTTT
Downstream 100 bases:
>100_bases AATTATATTTCTTAATAATAAAAATATAATTAGTTAATAAAACATATTATTTTATAGTATAGATTGGTTAATAAAAGTAC AGATTGGTTAATGAAACATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MNLLKCDSWAVILNNSDKESKAYKILDELKRNMYKVVAIDEEKKPIEGIDVYECLKDVPHNIDVVAIIDKQSKMDVILEE VELLDIQNMWFEKGSFSEMMIKKTKDLKLNIEYNLSLYDELTR
Sequences:
>Translated_123_residues MNLLKCDSWAVILNNSDKESKAYKILDELKRNMYKVVAIDEEKKPIEGIDVYECLKDVPHNIDVVAIIDKQSKMDVILEE VELLDIQNMWFEKGSFSEMMIKKTKDLKLNIEYNLSLYDELTR >Mature_123_residues MNLLKCDSWAVILNNSDKESKAYKILDELKRNMYKVVAIDEEKKPIEGIDVYECLKDVPHNIDVVAIIDKQSKMDVILEE VELLDIQNMWFEKGSFSEMMIKKTKDLKLNIEYNLSLYDELTR
Specific function: Unknown
COG id: COG1832
COG function: function code R; Predicted CoA-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14462; Mature: 14462
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLKCDSWAVILNNSDKESKAYKILDELKRNMYKVVAIDEEKKPIEGIDVYECLKDVPH CCCEECCCEEEEEECCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHCCC NIDVVAIIDKQSKMDVILEEVELLDIQNMWFEKGSFSEMMIKKTKDLKLNIEYNLSLYDE CCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEEECEEHHHH LTR HCC >Mature Secondary Structure MNLLKCDSWAVILNNSDKESKAYKILDELKRNMYKVVAIDEEKKPIEGIDVYECLKDVPH CCCEECCCEEEEEECCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHCCC NIDVVAIIDKQSKMDVILEEVELLDIQNMWFEKGSFSEMMIKKTKDLKLNIEYNLSLYDE CCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEEECEEHHHH LTR HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA