Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699291

Identifier: 126699291

GI number: 126699291

Start: 1958913

End: 1959641

Strand: Direct

Name: 126699291

Synonym: CD1685

Alternate gene names: NA

Gene position: 1958913-1959641 (Clockwise)

Preceding gene: 126699290

Following gene: 126699292

Centisome position: 45.66

GC content: 23.59

Gene sequence:

>729_bases
ATGATGTTTGATAGGGGAAAATGGAATAAATTGGATTATAATGAACTTTTAGAATATATGATGTCTATACAAGATATAAA
ATATAGAGATTTTAATAAAAAGCTTATACCTGGAACAGAAAATATAATAGGTATTAGAGTTCCTAATTTAAGAAAGTTAT
CAAAAGAAATAAGCCAAGGAAATTGGAAGGAATTTTTAGAAGTAGCAGAGGATACATACTATGAAGAAGTTAGGCTACAA
GGTATGGTAATTGGCAATATAAATAGTAATTTTGAAGAAACTTTATACTATGTAAAAAGATTTATACCTAAAATCGATAA
TTGGTCAGTTTGCGATGGATTTTGTTCTGATTTAAAGTCTGTTAAAAAATATAAAGAAAATATGTATGATATACTTAAAA
AATATGTTTATTCAAAGAATCCATGGGAAATTAGATTTGCATTAGTTATGTTTTTAATATATTATGTTGATGATAAACAT
ATTAAAGAAATATTTGAATACTGTAATAATATACAAAGTGAAGAATATTATGTTAAAATGGGTATGGCATGGTTGCTATC
AATTTGTTTTATTAAATGTGAAGAGGAAACTTTTCTCTATATAAAAAATAATAATTTAGATGATTTCACTTATAATAAAA
TGCTACAAAAAATAATTGAATCAAATAGAGTAGATTTAGAAAAGAAGAATATAATAAGAAGTATGAAAAGAAAGACAAGA
AGATGTTGA

Upstream 100 bases:

>100_bases
GAAAAGTTTCTTATGTTTTTGAAAAAGCTTCTAATAGTTAGAAGCTTTTTTTGTAGAGTTTTATGTTACAATAAGAAAAA
AGGAATTAAGGAGCAATTAA

Downstream 100 bases:

>100_bases
CGGAGGAATATTAATGAATAACAATGAAGACAGAATTGACAAATTTTTAGAACTTCAAAGCAAAGGATTTAAATTTGCAG
AGATAGCTCAAAATCTAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MMFDRGKWNKLDYNELLEYMMSIQDIKYRDFNKKLIPGTENIIGIRVPNLRKLSKEISQGNWKEFLEVAEDTYYEEVRLQ
GMVIGNINSNFEETLYYVKRFIPKIDNWSVCDGFCSDLKSVKKYKENMYDILKKYVYSKNPWEIRFALVMFLIYYVDDKH
IKEIFEYCNNIQSEEYYVKMGMAWLLSICFIKCEEETFLYIKNNNLDDFTYNKMLQKIIESNRVDLEKKNIIRSMKRKTR
RC

Sequences:

>Translated_242_residues
MMFDRGKWNKLDYNELLEYMMSIQDIKYRDFNKKLIPGTENIIGIRVPNLRKLSKEISQGNWKEFLEVAEDTYYEEVRLQ
GMVIGNINSNFEETLYYVKRFIPKIDNWSVCDGFCSDLKSVKKYKENMYDILKKYVYSKNPWEIRFALVMFLIYYVDDKH
IKEIFEYCNNIQSEEYYVKMGMAWLLSICFIKCEEETFLYIKNNNLDDFTYNKMLQKIIESNRVDLEKKNIIRSMKRKTR
RC
>Mature_242_residues
MMFDRGKWNKLDYNELLEYMMSIQDIKYRDFNKKLIPGTENIIGIRVPNLRKLSKEISQGNWKEFLEVAEDTYYEEVRLQ
GMVIGNINSNFEETLYYVKRFIPKIDNWSVCDGFCSDLKSVKKYKENMYDILKKYVYSKNPWEIRFALVMFLIYYVDDKH
IKEIFEYCNNIQSEEYYVKMGMAWLLSICFIKCEEETFLYIKNNNLDDFTYNKMLQKIIESNRVDLEKKNIIRSMKRKTR
RC

Specific function: Unknown

COG id: COG4912

COG function: function code L; Predicted DNA alkylation repair enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29455; Mature: 29455

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFDRGKWNKLDYNELLEYMMSIQDIKYRDFNKKLIPGTENIIGIRVPNLRKLSKEISQG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCC
NWKEFLEVAEDTYYEEVRLQGMVIGNINSNFEETLYYVKRFIPKIDNWSVCDGFCSDLKS
CHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
VKKYKENMYDILKKYVYSKNPWEIRFALVMFLIYYVDDKHIKEIFEYCNNIQSEEYYVKM
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHH
GMAWLLSICFIKCEEETFLYIKNNNLDDFTYNKMLQKIIESNRVDLEKKNIIRSMKRKTR
HHHHHHHHHHHEECCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
RC
CC
>Mature Secondary Structure
MMFDRGKWNKLDYNELLEYMMSIQDIKYRDFNKKLIPGTENIIGIRVPNLRKLSKEISQG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCC
NWKEFLEVAEDTYYEEVRLQGMVIGNINSNFEETLYYVKRFIPKIDNWSVCDGFCSDLKS
CHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
VKKYKENMYDILKKYVYSKNPWEIRFALVMFLIYYVDDKHIKEIFEYCNNIQSEEYYVKM
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHH
GMAWLLSICFIKCEEETFLYIKNNNLDDFTYNKMLQKIIESNRVDLEKKNIIRSMKRKTR
HHHHHHHHHHHEECCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
RC
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA