Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699273

Identifier: 126699273

GI number: 126699273

Start: 1944262

End: 1945284

Strand: Direct

Name: 126699273

Synonym: CD1668

Alternate gene names: NA

Gene position: 1944262-1945284 (Clockwise)

Preceding gene: 126699272

Following gene: 126699274

Centisome position: 45.32

GC content: 24.83

Gene sequence:

>1023_bases
TTGGTAAATTGGGAAATAAAAAAATTGGCTAAATCTAAGAGTATGTTTATATCTCTAGGGATATTAGTGTTAATACTAAT
GATTAGTATCTTTATTACGCCTGTTTTAGAAACAGAAAGTTATTATATAGATAAAGAAAAAGGACGTATAGAAGATACGA
GAAGTGGTATCGACGTAGGTAATGAGAAATTTCAAAATAAGATTAATGTTTTAAAGCAGTTTTCAAATCAAACAGATACA
GGTGAATTTTCTAAAAAAATTGAATTAATGTCAAAGAAAAAACTTGATAATCTAAGTGTGAATGAATATAAGGATATTAG
TTTTTGGAAAGTATTTAACTATAGAGTTACAAATTCACTTATAAATGTAGGAATGTTAATCATTATATCTATAATTATAT
CCAATATTTACGTAGATGAAGTCGTTACTTCGGTAAAAGATATCATACTATCATCAAAAGAGAAGAAAAAAGCATTAAAG
TCTAAAATATTTGTTGCTTTATTAGTTCCATTAGTAATTTATTCTGTTTATTTAATGGGAATATTTATTATAACTTGTAT
GCAACAAGGAGTACCTGTTAATGGAGACTTAGAATCTTTTAGAATAGTAGACAATGTAGTTGCATTGAAAACTAATTTAA
GTATAACAAAGTATGTAATATTAAATATAGGCATAGAGCTTTTGATGTTTGAAGGATGGGCCATGATAGCCATATTTGGG
TCTTTTATAAGTAAGTCTTCAATATCTTCAATAAGTTTTTTTATATTTATTATATCTATAACTAAGATAATGTCGGTAAT
CCATATATTACCTAAAAAATTACTTTCAGTTGTATCAAATGTAAATTATTATGATTTGATATTTGGTTTTAATAAAATAA
TAGGAAATTATCTAGGTGATATTATGATATTTAAAGTGAATATAGACATTGTCAATATAGCAATAGGACTTTTGATGGCA
ATATTGATAGGTGCTATGTCATTATGTTTTTTAGTAATAAAATCAGATTGTATAAGTAGATAA

Upstream 100 bases:

>100_bases
TAAAATAATTTAAGCTTTATTTAAGGTTAGTATTATATTTATATAAGATTTAAGTTTTAATATATATGTGTAATTAAAAT
GATTTAGGAGGAGAAATATA

Downstream 100 bases:

>100_bases
AAGGGGAGTTAAGATGAATAAATTAGAAATAGAAAATCTTTCAAAGATATATGGTAAAAAAGTAGCAAACGACAAGATTA
CAGTAACTCTGGAAAATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MVNWEIKKLAKSKSMFISLGILVLILMISIFITPVLETESYYIDKEKGRIEDTRSGIDVGNEKFQNKINVLKQFSNQTDT
GEFSKKIELMSKKKLDNLSVNEYKDISFWKVFNYRVTNSLINVGMLIIISIIISNIYVDEVVTSVKDIILSSKEKKKALK
SKIFVALLVPLVIYSVYLMGIFIITCMQQGVPVNGDLESFRIVDNVVALKTNLSITKYVILNIGIELLMFEGWAMIAIFG
SFISKSSISSISFFIFIISITKIMSVIHILPKKLLSVVSNVNYYDLIFGFNKIIGNYLGDIMIFKVNIDIVNIAIGLLMA
ILIGAMSLCFLVIKSDCISR

Sequences:

>Translated_340_residues
MVNWEIKKLAKSKSMFISLGILVLILMISIFITPVLETESYYIDKEKGRIEDTRSGIDVGNEKFQNKINVLKQFSNQTDT
GEFSKKIELMSKKKLDNLSVNEYKDISFWKVFNYRVTNSLINVGMLIIISIIISNIYVDEVVTSVKDIILSSKEKKKALK
SKIFVALLVPLVIYSVYLMGIFIITCMQQGVPVNGDLESFRIVDNVVALKTNLSITKYVILNIGIELLMFEGWAMIAIFG
SFISKSSISSISFFIFIISITKIMSVIHILPKKLLSVVSNVNYYDLIFGFNKIIGNYLGDIMIFKVNIDIVNIAIGLLMA
ILIGAMSLCFLVIKSDCISR
>Mature_340_residues
MVNWEIKKLAKSKSMFISLGILVLILMISIFITPVLETESYYIDKEKGRIEDTRSGIDVGNEKFQNKINVLKQFSNQTDT
GEFSKKIELMSKKKLDNLSVNEYKDISFWKVFNYRVTNSLINVGMLIIISIIISNIYVDEVVTSVKDIILSSKEKKKALK
SKIFVALLVPLVIYSVYLMGIFIITCMQQGVPVNGDLESFRIVDNVVALKTNLSITKYVILNIGIELLMFEGWAMIAIFG
SFISKSSISSISFFIFIISITKIMSVIHILPKKLLSVVSNVNYYDLIFGFNKIIGNYLGDIMIFKVNIDIVNIAIGLLMA
ILIGAMSLCFLVIKSDCISR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38349; Mature: 38349

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNWEIKKLAKSKSMFISLGILVLILMISIFITPVLETESYYIDKEKGRIEDTRSGIDVG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHCCCCCC
NEKFQNKINVLKQFSNQTDTGEFSKKIELMSKKKLDNLSVNEYKDISFWKVFNYRVTNSL
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
INVGMLIIISIIISNIYVDEVVTSVKDIILSSKEKKKALKSKIFVALLVPLVIYSVYLMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFIITCMQQGVPVNGDLESFRIVDNVVALKTNLSITKYVILNIGIELLMFEGWAMIAIFG
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHCCCHHHHHHHH
SFISKSSISSISFFIFIISITKIMSVIHILPKKLLSVVSNVNYYDLIFGFNKIIGNYLGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
IMIFKVNIDIVNIAIGLLMAILIGAMSLCFLVIKSDCISR
EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVNWEIKKLAKSKSMFISLGILVLILMISIFITPVLETESYYIDKEKGRIEDTRSGIDVG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHCCCCCC
NEKFQNKINVLKQFSNQTDTGEFSKKIELMSKKKLDNLSVNEYKDISFWKVFNYRVTNSL
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
INVGMLIIISIIISNIYVDEVVTSVKDIILSSKEKKKALKSKIFVALLVPLVIYSVYLMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFIITCMQQGVPVNGDLESFRIVDNVVALKTNLSITKYVILNIGIELLMFEGWAMIAIFG
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHCCCHHHHHHHH
SFISKSSISSISFFIFIISITKIMSVIHILPKKLLSVVSNVNYYDLIFGFNKIIGNYLGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
IMIFKVNIDIVNIAIGLLMAILIGAMSLCFLVIKSDCISR
EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA