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The map label for this gene is licB [H]

Identifier: 126699206

GI number: 126699206

Start: 1857176

End: 1857478

Strand: Direct

Name: licB [H]

Synonym: CD1602

Alternate gene names: 126699206

Gene position: 1857176-1857478 (Clockwise)

Preceding gene: 126699205

Following gene: 126699210

Centisome position: 43.29

GC content: 32.67

Gene sequence:

>303_bases
ATGATTAGGATATTGTTAGTGTGTGTTGGAGGCATGTCTTCTACCCTATTGGTAAATAAAATGGAGAAGGATGCAAAAAA
AAGAAATATAGACTGTAAAATATGGGCAGTTGGAGAAGGAGATATAAAATCGGAGCTTGATAACTTTGATATTTTACTTC
TTGGACCACAACTTAGATTTATGCTTGATGACGTAAAGTCTATAGTTGGAGATAGAGCTCCAGTATCTATAATAGATATG
GTAAACTATGGCACTTGTAATGGTCATGCTGTGTTAAATTCGGTTTTAGAAATATTAAAATAA

Upstream 100 bases:

>100_bases
ATAATCTAAGAGTAAAATTTAAGCAATTATAAATGATAAACTTTTCTACATATACTTTTTAATCAAGATATATGTAGATT
TGGTTAAAAAGGAGCTATAA

Downstream 100 bases:

>100_bases
ATAATAAAAGTGGATTCTATATAATAGAGTCCATTTTTATTATTTGTTATTAATAGGCTTAAAACTTAGCTTACCATTTC
TTTTTTTAATCTCCACATAG

Product: PTS system transporter subunit IIB

Products: NA

Alternate protein names: EIIB-Lic; PTS system lichenan-specific EIIB component [H]

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MIRILLVCVGGMSSTLLVNKMEKDAKKRNIDCKIWAVGEGDIKSELDNFDILLLGPQLRFMLDDVKSIVGDRAPVSIIDM
VNYGTCNGHAVLNSVLEILK

Sequences:

>Translated_100_residues
MIRILLVCVGGMSSTLLVNKMEKDAKKRNIDCKIWAVGEGDIKSELDNFDILLLGPQLRFMLDDVKSIVGDRAPVSIIDM
VNYGTCNGHAVLNSVLEILK
>Mature_100_residues
MIRILLVCVGGMSSTLLVNKMEKDAKKRNIDCKIWAVGEGDIKSELDNFDILLLGPQLRFMLDDVKSIVGDRAPVSIIDM
VNYGTCNGHAVLNSVLEILK

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: COG1440

COG function: function code G; Phosphotransferase system cellobiose-specific component IIB

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-3 domain [H]

Homologues:

Organism=Escherichia coli, GI1788034, Length=90, Percent_Identity=37.7777777777778, Blast_Score=66, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014350
- InterPro:   IPR003501
- InterPro:   IPR013012 [H]

Pfam domain/function: PF02302 PTS_IIB [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 11033; Mature: 11033

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS51100 PTS_EIIB_TYPE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRILLVCVGGMSSTLLVNKMEKDAKKRNIDCKIWAVGEGDIKSELDNFDILLLGPQLRF
CEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHCCCCCEEEEECCHHHH
MLDDVKSIVGDRAPVSIIDMVNYGTCNGHAVLNSVLEILK
HHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHC
>Mature Secondary Structure
MIRILLVCVGGMSSTLLVNKMEKDAKKRNIDCKIWAVGEGDIKSELDNFDILLLGPQLRF
CEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHCCCCCEEEEECCHHHH
MLDDVKSIVGDRAPVSIIDMVNYGTCNGHAVLNSVLEILK
HHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8990303; 8969509; 9384377 [H]