| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699042
Identifier: 126699042
GI number: 126699042
Start: 1669137
End: 1670495
Strand: Direct
Name: 126699042
Synonym: CD1438
Alternate gene names: NA
Gene position: 1669137-1670495 (Clockwise)
Preceding gene: 126699041
Following gene: 126699043
Centisome position: 38.91
GC content: 23.91
Gene sequence:
>1359_bases ATGCCTAGAAAAATTTTAGATATATCTTTGATAGAAGATAATAAAAGTGATTTGACTTTTTTTAATATAGAAGAAGAAGA CGGTGATGAAACATTAAAAGCATTAAAACAGAGTTATGTGACTACAAATTATAAAGAAGAAACTCTATTAAACTTGCAAG GAGCTTTAAATTCAAAGTCAGATACAACGTCTAAGGAGTTAAAATTAGAATCATATAAAAGATATAACAATGCATTGGAT TTAGCATATAAAAATTATATAACTAGTGCCATTAATATGGTTAATAAAGCTCTGGAGATAAATCCTAAAGACATTGATAT ACTAAATCTTAGAGGTCTTTTAAAATTATTAAAATGTGATTTTGCTAAATCATTTGAGAGTTTTTATACTGCTTTATGTT ATGAAAATAATCATATATCTAGAAAATATGTAAATCTAATTTCATCTGAAGATTTTAAAACTTTTTTAGGAAGATACAAT CATTCTATAAGATTTATAAATGAAGAATTAAATTATGAGTCAATACATATTTTAGAGAACATAATTGAAGAAGAACCTGA ACTAATAGAGCCATATGTAATTTTATCTTTGTTATATGATAAACTAGGTAATGTAAAAAAGAGAGAAGGATATTTAGACA AACTTAAAGAGCTAGATAAAGATAATCCTGTATTTGAAAAAAATGAAGAAGAAAAAGAAGAAGAAAAAGAAGATACAAGT AAAAATGAAGAAATAAAAAAAGTAAAAAGAAAGAAAAGTATTTTACCATATATTATAGTTGGCTGTGTTTTAATAGGTAT GGGGATATATTTGATTCAAAGCAAAAAGAGAATAGAAAACTTGAATAACCAAATAAGTAGTAAAGAGGAAAAGTTAAGTG AAACTGATAAAAAGTTAGGAGAAACTAGTAAAAAATTAGAAAAAACGAATAAGGAATTAAATGAGGTTAAAAATAAAGAA CCAGAAAGAGAGATAACTGTAGCTGATGAGGAAGATTTATATTATCAAGCTCTAAATTTAAAGAAAAACAAAGAATATGA AAAAGCCATAGATAATTTTAAAAGTATAGTTTCTTCTGGTAAAACTAAAAAATATATTTCTGAGTCAATATATCAATTAG CAATAACAAATAAATTATTAGGAAATAAGGATGAAGCTATAAAATATTACAAAAAATATATAAATACTTATACTAAAAAT GACCAGTATTATGATGATTCATATTACGAGTTGGGTATGCTTTATTATGATAATGGCGATTTAAAAAATGCACAACAGAC TTTTTATAGTTTGAGAAGTGAAGTTCCAGACAGTATGTATAACAATTCAAAAATAAAAGAAATTTTAAGTGAAAAATAG
Upstream 100 bases:
>100_bases AGTTTTGACTTGACATATTAAATATGTTATCTTAAATATATATTTTAGAGTGGAGGTGAGTATTATTTTAGTTAAAGATA TAAAACAAGACATAGAAAGC
Downstream 100 bases:
>100_bases GTTTATATAGTTAAGTTTTTTGAAACAACCAAGTATGTATTTTATTAAATTAAAATAAAAATAAATTTAAAAAGAGATTG TGTCAAATTATAACTTTCTA
Product: multiprotein complex assembly protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 452; Mature: 451
Protein sequence:
>452_residues MPRKILDISLIEDNKSDLTFFNIEEEDGDETLKALKQSYVTTNYKEETLLNLQGALNSKSDTTSKELKLESYKRYNNALD LAYKNYITSAINMVNKALEINPKDIDILNLRGLLKLLKCDFAKSFESFYTALCYENNHISRKYVNLISSEDFKTFLGRYN HSIRFINEELNYESIHILENIIEEEPELIEPYVILSLLYDKLGNVKKREGYLDKLKELDKDNPVFEKNEEEKEEEKEDTS KNEEIKKVKRKKSILPYIIVGCVLIGMGIYLIQSKKRIENLNNQISSKEEKLSETDKKLGETSKKLEKTNKELNEVKNKE PEREITVADEEDLYYQALNLKKNKEYEKAIDNFKSIVSSGKTKKYISESIYQLAITNKLLGNKDEAIKYYKKYINTYTKN DQYYDDSYYELGMLYYDNGDLKNAQQTFYSLRSEVPDSMYNNSKIKEILSEK
Sequences:
>Translated_452_residues MPRKILDISLIEDNKSDLTFFNIEEEDGDETLKALKQSYVTTNYKEETLLNLQGALNSKSDTTSKELKLESYKRYNNALD LAYKNYITSAINMVNKALEINPKDIDILNLRGLLKLLKCDFAKSFESFYTALCYENNHISRKYVNLISSEDFKTFLGRYN HSIRFINEELNYESIHILENIIEEEPELIEPYVILSLLYDKLGNVKKREGYLDKLKELDKDNPVFEKNEEEKEEEKEDTS KNEEIKKVKRKKSILPYIIVGCVLIGMGIYLIQSKKRIENLNNQISSKEEKLSETDKKLGETSKKLEKTNKELNEVKNKE PEREITVADEEDLYYQALNLKKNKEYEKAIDNFKSIVSSGKTKKYISESIYQLAITNKLLGNKDEAIKYYKKYINTYTKN DQYYDDSYYELGMLYYDNGDLKNAQQTFYSLRSEVPDSMYNNSKIKEILSEK >Mature_451_residues PRKILDISLIEDNKSDLTFFNIEEEDGDETLKALKQSYVTTNYKEETLLNLQGALNSKSDTTSKELKLESYKRYNNALDL AYKNYITSAINMVNKALEINPKDIDILNLRGLLKLLKCDFAKSFESFYTALCYENNHISRKYVNLISSEDFKTFLGRYNH SIRFINEELNYESIHILENIIEEEPELIEPYVILSLLYDKLGNVKKREGYLDKLKELDKDNPVFEKNEEEKEEEKEDTSK NEEIKKVKRKKSILPYIIVGCVLIGMGIYLIQSKKRIENLNNQISSKEEKLSETDKKLGETSKKLEKTNKELNEVKNKEP EREITVADEEDLYYQALNLKKNKEYEKAIDNFKSIVSSGKTKKYISESIYQLAITNKLLGNKDEAIKYYKKYINTYTKND QYYDDSYYELGMLYYDNGDLKNAQQTFYSLRSEVPDSMYNNSKIKEILSEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53017; Mature: 52885
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION ; PS00636 DNAJ_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRKILDISLIEDNKSDLTFFNIEEEDGDETLKALKQSYVTTNYKEETLLNLQGALNSKS CCCCEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCC DTTSKELKLESYKRYNNALDLAYKNYITSAINMVNKALEINPKDIDILNLRGLLKLLKCD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHH FAKSFESFYTALCYENNHISRKYVNLISSEDFKTFLGRYNHSIRFINEELNYESIHILEN HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCEEEHHHCCCHHHHHHHH IIEEEPELIEPYVILSLLYDKLGNVKKREGYLDKLKELDKDNPVFEKNEEEKEEEKEDTS HHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCC KNEEIKKVKRKKSILPYIIVGCVLIGMGIYLIQSKKRIENLNNQISSKEEKLSETDKKLG HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETSKKLEKTNKELNEVKNKEPEREITVADEEDLYYQALNLKKNKEYEKAIDNFKSIVSSG HHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC KTKKYISESIYQLAITNKLLGNKDEAIKYYKKYINTYTKNDQYYDDSYYELGMLYYDNGD CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCC LKNAQQTFYSLRSEVPDSMYNNSKIKEILSEK CCHHHHHHHHHHHHCCHHHHCCHHHHHHHCCC >Mature Secondary Structure PRKILDISLIEDNKSDLTFFNIEEEDGDETLKALKQSYVTTNYKEETLLNLQGALNSKS CCCEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCC DTTSKELKLESYKRYNNALDLAYKNYITSAINMVNKALEINPKDIDILNLRGLLKLLKCD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHH FAKSFESFYTALCYENNHISRKYVNLISSEDFKTFLGRYNHSIRFINEELNYESIHILEN HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCEEEHHHCCCHHHHHHHH IIEEEPELIEPYVILSLLYDKLGNVKKREGYLDKLKELDKDNPVFEKNEEEKEEEKEDTS HHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCC KNEEIKKVKRKKSILPYIIVGCVLIGMGIYLIQSKKRIENLNNQISSKEEKLSETDKKLG HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETSKKLEKTNKELNEVKNKEPEREITVADEEDLYYQALNLKKNKEYEKAIDNFKSIVSSG HHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC KTKKYISESIYQLAITNKLLGNKDEAIKYYKKYINTYTKNDQYYDDSYYELGMLYYDNGD CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCC LKNAQQTFYSLRSEVPDSMYNNSKIKEILSEK CCHHHHHHHHHHHHCCHHHHCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA