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The map label for this gene is ycsE [H]

Identifier: 126699013

GI number: 126699013

Start: 1634628

End: 1635407

Strand: Direct

Name: ycsE [H]

Synonym: CD1410

Alternate gene names: 126699013

Gene position: 1634628-1635407 (Clockwise)

Preceding gene: 126699012

Following gene: 126699016

Centisome position: 38.1

GC content: 27.82

Gene sequence:

>780_bases
ATGATAAAACATATATTTTGTGATTTAGATGGAACTCTATATGAAAATGGAACCATAACAAAAGAAGATATAGTAGCAAT
TGAAGAAATAGAAAAAAAGGGAGTACAGTTTAATGTTGCTACAGGTAGAATTTTTAAACAAGCACATAATATTATCAAAG
ATAGTTTAGATATGAATGGATACTATGTATGTGAAAATGGTTCATTTATATATGATAAAGATTATAATGTAATTTTTAAA
AGAACGATAGATGATAATTTAGTAAAAAAAGTCATTGATAGATTTGAGTCAAGTGATGCACAACTTTATTTTAAATATAA
GGGTGATGTAATTGTGGGTAGTGATACCACTGCTTTTAGACATTATTCTAGTGACTTTATAGTTGACCCAGATTTTGAAA
AAAGAAGTAGTTTTGATAATCTTATAGGAAATATAGGCGTATGTTCTGAAAATTTGGAAGAGTTATCCAGAATAGAACTT
TATCTAAAAAGTGAGTTTAGTGAAGTCTTAGAAATATATTTTTCTGGAACATATACTTTAAATATAGTTCCTAAAAGTGT
GTCAAAAAGAGGAAGTATAGAGCATGTAATAAAAACGTTAAATGTAAGTCCAGATGAAGTTGCTACTATTGGGGATTCTC
CAAATGATATTTGCATGTTAGAAGGATTTAAATATAGTTTTGCAATGTCTAAGGCAAGGGAAGATGTAAAGCAAAGTGCA
AATTATGTAGTAGATAGTGTAAAAAGTGCCATAGATGTTATAATGGAGATAAATAGTTAG

Upstream 100 bases:

>100_bases
AGATTTGCTTAATGAATTGAGAATACAATTAGAAAAGCTTTAAGTTATTTTGATTAAAGTATTAGTAAAATATAAAATTG
TTTTTGGAGGCTTTTAATTT

Downstream 100 bases:

>100_bases
TATAAAAAATGACTGTCCTAGAGAAGTATAAAATTATATTCTATAGAGCAGTCATTTTAATTATATTCAATTATAAGTTT
AAAAATTCTTAAGTTAACCG

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MIKHIFCDLDGTLYENGTITKEDIVAIEEIEKKGVQFNVATGRIFKQAHNIIKDSLDMNGYYVCENGSFIYDKDYNVIFK
RTIDDNLVKKVIDRFESSDAQLYFKYKGDVIVGSDTTAFRHYSSDFIVDPDFEKRSSFDNLIGNIGVCSENLEELSRIEL
YLKSEFSEVLEIYFSGTYTLNIVPKSVSKRGSIEHVIKTLNVSPDEVATIGDSPNDICMLEGFKYSFAMSKAREDVKQSA
NYVVDSVKSAIDVIMEINS

Sequences:

>Translated_259_residues
MIKHIFCDLDGTLYENGTITKEDIVAIEEIEKKGVQFNVATGRIFKQAHNIIKDSLDMNGYYVCENGSFIYDKDYNVIFK
RTIDDNLVKKVIDRFESSDAQLYFKYKGDVIVGSDTTAFRHYSSDFIVDPDFEKRSSFDNLIGNIGVCSENLEELSRIEL
YLKSEFSEVLEIYFSGTYTLNIVPKSVSKRGSIEHVIKTLNVSPDEVATIGDSPNDICMLEGFKYSFAMSKAREDVKQSA
NYVVDSVKSAIDVIMEINS
>Mature_259_residues
MIKHIFCDLDGTLYENGTITKEDIVAIEEIEKKGVQFNVATGRIFKQAHNIIKDSLDMNGYYVCENGSFIYDKDYNVIFK
RTIDDNLVKKVIDRFESSDAQLYFKYKGDVIVGSDTTAFRHYSSDFIVDPDFEKRSSFDNLIGNIGVCSENLEELSRIEL
YLKSEFSEVLEIYFSGTYTLNIVPKSVSKRGSIEHVIKTLNVSPDEVATIGDSPNDICMLEGFKYSFAMSKAREDVKQSA
NYVVDSVKSAIDVIMEINS

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001757
- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 29366; Mature: 29366

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKHIFCDLDGTLYENGTITKEDIVAIEEIEKKGVQFNVATGRIFKQAHNIIKDSLDMNG
CCEEEEECCCCEEECCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCC
YYVCENGSFIYDKDYNVIFKRTIDDNLVKKVIDRFESSDAQLYFKYKGDVIVGSDTTAFR
EEEECCCCEEEECCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEEECCEEECCCCHHHE
HYSSDFIVDPDFEKRSSFDNLIGNIGVCSENLEELSRIELYLKSEFSEVLEIYFSGTYTL
ECCCCEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
NIVPKSVSKRGSIEHVIKTLNVSPDEVATIGDSPNDICMLEGFKYSFAMSKAREDVKQSA
EEEECCCCCCCCHHHHHHHCCCCHHHEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
NYVVDSVKSAIDVIMEINS
HHHHHHHHHHHHHHEECCC
>Mature Secondary Structure
MIKHIFCDLDGTLYENGTITKEDIVAIEEIEKKGVQFNVATGRIFKQAHNIIKDSLDMNG
CCEEEEECCCCEEECCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCC
YYVCENGSFIYDKDYNVIFKRTIDDNLVKKVIDRFESSDAQLYFKYKGDVIVGSDTTAFR
EEEECCCCEEEECCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEEECCEEECCCCHHHE
HYSSDFIVDPDFEKRSSFDNLIGNIGVCSENLEELSRIELYLKSEFSEVLEIYFSGTYTL
ECCCCEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
NIVPKSVSKRGSIEHVIKTLNVSPDEVATIGDSPNDICMLEGFKYSFAMSKAREDVKQSA
EEEECCCCCCCCHHHHHHHCCCCHHHEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
NYVVDSVKSAIDVIMEINS
HHHHHHHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]