| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699007
Identifier: 126699007
GI number: 126699007
Start: 1627286
End: 1627633
Strand: Direct
Name: 126699007
Synonym: CD1404A
Alternate gene names: NA
Gene position: 1627286-1627633 (Clockwise)
Preceding gene: 126699006
Following gene: 126699012
Centisome position: 37.93
GC content: 27.3
Gene sequence:
>348_bases ATGAGCAAGAGTAATGATGTTTTAGATATTGTATTTAAAATTACTGATGGACTTGAATATGAAGTAGCTGAAAATAGTGT TGTTACTATACTTGAAAAACAGGACCATAAAATTCAAAAGTTTTTTAGAAAGTTAAAAGCTAGAATACCTAAATACAAAA AAATAGAACTAGATGAATATTCCAGTTTTGTTTTTTTACAAATTGATGGTCAAAGGACTGTTAGAGAAATAGGCAAGAAC CTAGAAGCTAAATATGGAGAAGAATCTCATCCACTTTATGAAAGGTTGTTAGTATTTTTAAATCATATTGAAGTTAATTG TCACTATATTGAAAGACTGGATATATAG
Upstream 100 bases:
>100_bases CCAAGTGGATTTGCTGCAACAAATTCAATGGCAATTGCTTTATTAGTAGTTTTAGTTGTGCTTACAGCATTACCTATTGT TTTATCTAAAGTAAAAAATA
Downstream 100 bases:
>100_bases ATATAATAAGAATTATTATAGATATATTAGAGCATATAAATTAGAAGGTAATTATGAAAGAGGCTGTCTCAAAATAGAGA TAAGCCTCTTTTGTATTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MSKSNDVLDIVFKITDGLEYEVAENSVVTILEKQDHKIQKFFRKLKARIPKYKKIELDEYSSFVFLQIDGQRTVREIGKN LEAKYGEESHPLYERLLVFLNHIEVNCHYIERLDI
Sequences:
>Translated_115_residues MSKSNDVLDIVFKITDGLEYEVAENSVVTILEKQDHKIQKFFRKLKARIPKYKKIELDEYSSFVFLQIDGQRTVREIGKN LEAKYGEESHPLYERLLVFLNHIEVNCHYIERLDI >Mature_114_residues SKSNDVLDIVFKITDGLEYEVAENSVVTILEKQDHKIQKFFRKLKARIPKYKKIELDEYSSFVFLQIDGQRTVREIGKNL EAKYGEESHPLYERLLVFLNHIEVNCHYIERLDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13662; Mature: 13531
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSNDVLDIVFKITDGLEYEVAENSVVTILEKQDHKIQKFFRKLKARIPKYKKIELDEY CCCCCCCEEEEEEECCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCC SSFVFLQIDGQRTVREIGKNLEAKYGEESHPLYERLLVFLNHIEVNCHYIERLDI CCEEEEEECCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEEEECC >Mature Secondary Structure SKSNDVLDIVFKITDGLEYEVAENSVVTILEKQDHKIQKFFRKLKARIPKYKKIELDEY CCCCCCEEEEEEECCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCC SSFVFLQIDGQRTVREIGKNLEAKYGEESHPLYERLLVFLNHIEVNCHYIERLDI CCEEEEEECCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA