| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is cocE [H]
Identifier: 126698993
GI number: 126698993
Start: 1610489
End: 1612204
Strand: Direct
Name: cocE [H]
Synonym: CD1391
Alternate gene names: 126698993
Gene position: 1610489-1612204 (Clockwise)
Preceding gene: 126698992
Following gene: 126698995
Centisome position: 37.54
GC content: 30.77
Gene sequence:
>1716_bases ATGGATGGATATGAAGAGTATACTGTATTAAAAGAATGGGAAAAAACTCATAAAAATGAAGAGATATATTCTATAAGATT TGGTGGAAATTATATGATTGATATGAAAGATGGTATAAAACTTTCTACAGATGTATATCTCCCTGATTTTGTAGATTCTG CCAAAAAAGCACCGACAATTCTTATGAGAACTCCATATGGAAAAGAAAATGATAAAGAAATATATTATAAATATGTACAA AGAGGATATGCTGTTGTAATACAAGATGTTAGGGGAAGAAATGAATCAGAAGGTAAGTGGGAACCTATGATTCATGAGAG GGAAGATGGAGATAGTACCATAAATTGGATAGTATCACAGGAATGGTCAAGTGGAATAGTTGGAATGCTTGGAGCATCAT ATCTTGGTTATGTCCAATGGGCAGCTGCATCTTCAGGCAATAAGCATCTTAAAGCTTTAGTTAGTATAGTAACATCAGGA AGCCCTTTTATTGATATACCAAGAAAAGGAGGAGCTTTTGTATCTGGTATGCTTGCATGGGCATTTATGGTATCAAGAAA TAAAGTTGATAGAAGCAAAATGGTAAGAGATGATTGGGATGATGTTTTAAACATACGACCAATAGAAAATATACCTGTTG AAGCTCTTGGATATAGAATTGAATTTCTGGAAGAATGGTTAAAGAGAGTAGAAAAAGATGAGTATTGGGATTTGATGGAC TGGCATTTACAAAAAGATAAAATAAATGTACCTGCATTGGTTGTATCTGGGTGGTATGATGATAATAGTATGGGAACTAC AGAGGCCTTAGATGTTATAAAGGACTATGAAAAAGGAAAGAGAAAGGCTATTCTAGGTCCATGGATGCATAATTCAAATA CTTTAAGAGATATAAATGGTATTTCTTTAGGAAATAGTTCATTAAGATATGATTTGGATTATAATTATCTATTATGGTTT GATAAATACTTAAAAGGTATAGAAAATAACATAGATACGACTGCTCCAGTAGAGTATTACTCTGTAGGTTCTAATAAGTG GAAGACAGAAGAAAATTGGCCAATAATAAATAAGATAGATAAAAGTATGTATCTAATAAGTGATGGAAATGCTAACACAT CTTTAGGAAATGGTAGATTAGTATTTGATAATGATTTAGAAGAAAAGTATGATAGTTATATATATAATCCAAAAGACCCA TCAGTACAACTAATTGATATGTCAGAGAATGAAGTTGGAGTTCCAAATAACTACAAAGATTTAGAAAAAAGAAGTGATAT GTTGTGTTATACATCAGATGCTTTTAGTGAAGAATTTACTGTAACAGGTGATATAAAGTTAGAGTTTTTTGCATCAAGTT CTGCCAAAGATACTGACTGGGTTATAAAAATTATGGACGTGGATTTAGATGGAAATTCAATTAAATTAGCTGATGGTATA CTTAGTGCTAGATTTAGAAATAGTTTTTATAAGTCAGAGTTTATGGAAGAAGGAGAGATTTATAAGTTTACGATTATAAC TTCAAAAATATCAAACACGTTTAAAGTTGGTCATAAAATTAGACTAGATATAACGTCTAGTGCTAAAAACTTTATTTTCC AAAATAGCAACACGACAGAGGGATATAATAGTATTGAATATATAGAAGCAAAGAATATGATTTATCATGGAGGTAAATAT CCATCTAAATTGATATTGCCAATAGAGAATAAGTAA
Upstream 100 bases:
>100_bases GGTTCAAAGAAACAAAAAGTTCCCACTAGATATAATTATTGTAGATAATAAAATAGTAGGTTTTATCTGTTTATCTAGAG AAACTTGTACTATATTAATT
Downstream 100 bases:
>100_bases ATTTATATAGATTAAATAGTGAGGAGGTGTCTCAAAATGAATTTTTTAGTTCGTGAGACACTTTCTTTTATACGAAATCA AATATATTTTCATCATTTCA
Product: esterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 571; Mature: 571
Protein sequence:
>571_residues MDGYEEYTVLKEWEKTHKNEEIYSIRFGGNYMIDMKDGIKLSTDVYLPDFVDSAKKAPTILMRTPYGKENDKEIYYKYVQ RGYAVVIQDVRGRNESEGKWEPMIHEREDGDSTINWIVSQEWSSGIVGMLGASYLGYVQWAAASSGNKHLKALVSIVTSG SPFIDIPRKGGAFVSGMLAWAFMVSRNKVDRSKMVRDDWDDVLNIRPIENIPVEALGYRIEFLEEWLKRVEKDEYWDLMD WHLQKDKINVPALVVSGWYDDNSMGTTEALDVIKDYEKGKRKAILGPWMHNSNTLRDINGISLGNSSLRYDLDYNYLLWF DKYLKGIENNIDTTAPVEYYSVGSNKWKTEENWPIINKIDKSMYLISDGNANTSLGNGRLVFDNDLEEKYDSYIYNPKDP SVQLIDMSENEVGVPNNYKDLEKRSDMLCYTSDAFSEEFTVTGDIKLEFFASSSAKDTDWVIKIMDVDLDGNSIKLADGI LSARFRNSFYKSEFMEEGEIYKFTIITSKISNTFKVGHKIRLDITSSAKNFIFQNSNTTEGYNSIEYIEAKNMIYHGGKY PSKLILPIENK
Sequences:
>Translated_571_residues MDGYEEYTVLKEWEKTHKNEEIYSIRFGGNYMIDMKDGIKLSTDVYLPDFVDSAKKAPTILMRTPYGKENDKEIYYKYVQ RGYAVVIQDVRGRNESEGKWEPMIHEREDGDSTINWIVSQEWSSGIVGMLGASYLGYVQWAAASSGNKHLKALVSIVTSG SPFIDIPRKGGAFVSGMLAWAFMVSRNKVDRSKMVRDDWDDVLNIRPIENIPVEALGYRIEFLEEWLKRVEKDEYWDLMD WHLQKDKINVPALVVSGWYDDNSMGTTEALDVIKDYEKGKRKAILGPWMHNSNTLRDINGISLGNSSLRYDLDYNYLLWF DKYLKGIENNIDTTAPVEYYSVGSNKWKTEENWPIINKIDKSMYLISDGNANTSLGNGRLVFDNDLEEKYDSYIYNPKDP SVQLIDMSENEVGVPNNYKDLEKRSDMLCYTSDAFSEEFTVTGDIKLEFFASSSAKDTDWVIKIMDVDLDGNSIKLADGI LSARFRNSFYKSEFMEEGEIYKFTIITSKISNTFKVGHKIRLDITSSAKNFIFQNSNTTEGYNSIEYIEAKNMIYHGGKY PSKLILPIENK >Mature_571_residues MDGYEEYTVLKEWEKTHKNEEIYSIRFGGNYMIDMKDGIKLSTDVYLPDFVDSAKKAPTILMRTPYGKENDKEIYYKYVQ RGYAVVIQDVRGRNESEGKWEPMIHEREDGDSTINWIVSQEWSSGIVGMLGASYLGYVQWAAASSGNKHLKALVSIVTSG SPFIDIPRKGGAFVSGMLAWAFMVSRNKVDRSKMVRDDWDDVLNIRPIENIPVEALGYRIEFLEEWLKRVEKDEYWDLMD WHLQKDKINVPALVVSGWYDDNSMGTTEALDVIKDYEKGKRKAILGPWMHNSNTLRDINGISLGNSSLRYDLDYNYLLWF DKYLKGIENNIDTTAPVEYYSVGSNKWKTEENWPIINKIDKSMYLISDGNANTSLGNGRLVFDNDLEEKYDSYIYNPKDP SVQLIDMSENEVGVPNNYKDLEKRSDMLCYTSDAFSEEFTVTGDIKLEFFASSSAKDTDWVIKIMDVDLDGNSIKLADGI LSARFRNSFYKSEFMEEGEIYKFTIITSKISNTFKVGHKIRLDITSSAKNFIFQNSNTTEGYNSIEYIEAKNMIYHGGKY PSKLILPIENK
Specific function: Hydrolyzes cocaine to benzoate and ecgonine methyl ester, endowing the bacteria with the ability to utilize cocaine as a sole source of carbon and energy for growth, as this bacterium lives in the rhizosphere of coca plants [H]
COG id: COG2936
COG function: function code R; Predicted acyl esterases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alpha/beta hydrolase family. Carboxylesterase subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005674 - InterPro: IPR008979 - InterPro: IPR013736 - InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15; PF08530 PepX_C [H]
EC number: NA
Molecular weight: Translated: 65698; Mature: 65698
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGYEEYTVLKEWEKTHKNEEIYSIRFGGNYMIDMKDGIKLSTDVYLPDFVDSAKKAPTI CCCHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCEEEEEEEECCHHHHHHHCCCEE LMRTPYGKENDKEIYYKYVQRGYAVVIQDVRGRNESEGKWEPMIHEREDGDSTINWIVSQ EEECCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC EWSSGIVGMLGASYLGYVQWAAASSGNKHLKALVSIVTSGSPFIDIPRKGGAFVSGMLAW CCCCCHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHH AFMVSRNKVDRSKMVRDDWDDVLNIRPIENIPVEALGYRIEFLEEWLKRVEKDEYWDLMD HHHHHCCCCCHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH WHLQKDKINVPALVVSGWYDDNSMGTTEALDVIKDYEKGKRKAILGPWMHNSNTLRDING HEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEECCC ISLGNSSLRYDLDYNYLLWFDKYLKGIENNIDTTAPVEYYSVGSNKWKTEENWPIINKID EEECCCCEEEECCCCEEEHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCHHHCCC KSMYLISDGNANTSLGNGRLVFDNDLEEKYDSYIYNPKDPSVQLIDMSENEVGVPNNYKD CEEEEEECCCCCCCCCCCEEEECCCHHHHHHHCEECCCCCCEEEEECCCCCCCCCCCHHH LEKRSDMLCYTSDAFSEEFTVTGDIKLEFFASSSAKDTDWVIKIMDVDLDGNSIKLADGI HHHHCCEEEEECCCCCCCEEEEEEEEEEEEECCCCCCCCEEEEEEEEECCCCEEEEHHHH LSARFRNSFYKSEFMEEGEIYKFTIITSKISNTFKVGHKIRLDITSSAKNFIFQNSNTTE HHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEECCCEEEEEEECCCCCEEEECCCCCC GYNSIEYIEAKNMIYHGGKYPSKLILPIENK CCCCEEEEEECCEEEECCCCCCEEEEEECCC >Mature Secondary Structure MDGYEEYTVLKEWEKTHKNEEIYSIRFGGNYMIDMKDGIKLSTDVYLPDFVDSAKKAPTI CCCHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCEEEEEEEECCHHHHHHHCCCEE LMRTPYGKENDKEIYYKYVQRGYAVVIQDVRGRNESEGKWEPMIHEREDGDSTINWIVSQ EEECCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC EWSSGIVGMLGASYLGYVQWAAASSGNKHLKALVSIVTSGSPFIDIPRKGGAFVSGMLAW CCCCCHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHH AFMVSRNKVDRSKMVRDDWDDVLNIRPIENIPVEALGYRIEFLEEWLKRVEKDEYWDLMD HHHHHCCCCCHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH WHLQKDKINVPALVVSGWYDDNSMGTTEALDVIKDYEKGKRKAILGPWMHNSNTLRDING HEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEECCC ISLGNSSLRYDLDYNYLLWFDKYLKGIENNIDTTAPVEYYSVGSNKWKTEENWPIINKID EEECCCCEEEECCCCEEEHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCHHHCCC KSMYLISDGNANTSLGNGRLVFDNDLEEKYDSYIYNPKDPSVQLIDMSENEVGVPNNYKD CEEEEEECCCCCCCCCCCEEEECCCHHHHHHHCEECCCCCCEEEEECCCCCCCCCCCHHH LEKRSDMLCYTSDAFSEEFTVTGDIKLEFFASSSAKDTDWVIKIMDVDLDGNSIKLADGI HHHHCCEEEEECCCCCCCEEEEEEEEEEEEECCCCCCCCEEEEEEEEECCCCEEEEHHHH LSARFRNSFYKSEFMEEGEIYKFTIITSKISNTFKVGHKIRLDITSSAKNFIFQNSNTTE HHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEECCCEEEEEEECCCCCEEEECCCCCC GYNSIEYIEAKNMIYHGGKYPSKLILPIENK CCCCEEEEEECCEEEECCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10698749; 11742345; 12369817 [H]