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The map label for this gene is 126698928

Identifier: 126698928

GI number: 126698928

Start: 1541111

End: 1542673

Strand: Direct

Name: 126698928

Synonym: CD1329

Alternate gene names: NA

Gene position: 1541111-1542673 (Clockwise)

Preceding gene: 126698927

Following gene: 126698929

Centisome position: 35.92

GC content: 32.95

Gene sequence:

>1563_bases
TTGGGATTATTAACGAAGGAGGTGGATGTCATAGATAGTGTAGTAATGATTGTAATAGGTGCAGCTGTTGGTATTATAGC
TGGATATTTTGTTAGAAAAAATATATCTGAAGCAAAAATTGGACAAGCTGAAAACTTGGCCAAAGAAATAATAGATAAAG
CACACCACGACTCAGAAACAGTACAAAAAGAAAAATTACTAGAAGCTAAAGAAGAGATCCATAAGTGGAGAACAGAAGCT
GAAAGAGAAAACAGAGAAAGAAGAACAGAAGTACAAAAGTATGAAAAAAGAGTAGTACAAAAAGAAGAAGTCTTAGATAG
AAAATTACAAAATTTAGAATCTAAAGAAGTAAACCTAAGTGAAAAATTAAAGGTAGTGGAAAAGAAAGAAGAAGAAGTTG
AAGTAATAAAAACTCAACAGTTAGAAAAATTAGAAAGTATATCAGGAATTACTTCTGATAAGGCCAAAGAAATCATCTTA
ACCAATGCGGAGAGAGATGTAAGACGTGAAATGTCTATAATGATAAAAGAGATAGAAAGTCAAGCTAAAGAAGAAGCTGA
TAAGAAATCAAGAGAAATTATAGGATATGCAATTCAAAAATGTGCAGCAGATCACGTAGCCGAAACTACTGTAACAGTAG
TAAGCTTGCCTAATGATGAAATGAAAGGTAGAATAATAGGTAGGGAAGGTAGAAATATAAGGACTTTAGAAACCTTAACA
GGTATAGACCTTATAATAGATGACACTCCAGAAGCCGTAATTTTATCAGGATTTGATCCAATAAGAAGAGAAATTGCAAG
AATTGCTCTAGAAAAATTAATAGCAGATGGAAGAATACATCCAGCTAGAATTGAAGAAATGGTTGAAAAGGCGAGAAAAG
AAGTTGACAATATTATAAAAGAATATGGTGAACAAGCTGCATTTGAAACTAGTGTACATGGGATTCATCCGGAATTAATA
AGATTATTAGGTAGACTTAACTATAGAACTAGTTATGGACAAAATGTACTTAAACATTCTATAGAAGTTGCTCATATAGC
TGGTATAATGGCTGCTGAAATAGGAGCAGATATTAGATTGGCTAAGAGGGCAGGTTTATTACATGATATAGGTAAGGCTG
TAGACCATGAAATGGAAGGTACACATGTTGAAATAGGTATGGATTTACTTAGACGTTATAAAGAGTCTAAAGAAGTTATA
CATGCCATGAGTACTCATCATGGAGATTACGAGCCTCAAACAGTAGAGGCTGTATTAGTTACAGCAGCAGATGCAATATC
AGCTGCTAGACCTGGTGCGAGAAGAGAAACTTTAGAAGCATATATAAAGAGACTTGAAAAATTAGAAGAAATAGCTAATT
CATATGAAGGTGTAGAAAAATCATTTGCTATACAAGCTGGTAGAGAAATAAGAATAATGGTAAAACCAGAAGCTATAAAT
GATGAAGAAATACATCTATTGGCTAGAGATATGACTAAGAAAATAGAGGATGAACTTGAATATCCTGGACAAATAAAAGT
AAGCATAATAAGAGAAACAAGAGCTATAGAGTATGCGAAGTAA

Upstream 100 bases:

>100_bases
CTTGACACAATGTTGAAAAAATTATAAAATTAAGTGAGGATAAAATATCTAAATTTAATTTTAATTATTAGGAATATTTT
TTAATCATAGTGATGACATT

Downstream 100 bases:

>100_bases
AAGAAATAATATCTAAATAATAAGAAAATATTTTTAGAAATTTAAATTTGCCACAAGATATGATAATATATCTTGTGGCT
TTTAAATTGTTTAAGTTTAA

Product: phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 520; Mature: 519

Protein sequence:

>520_residues
MGLLTKEVDVIDSVVMIVIGAAVGIIAGYFVRKNISEAKIGQAENLAKEIIDKAHHDSETVQKEKLLEAKEEIHKWRTEA
ERENRERRTEVQKYEKRVVQKEEVLDRKLQNLESKEVNLSEKLKVVEKKEEEVEVIKTQQLEKLESISGITSDKAKEIIL
TNAERDVRREMSIMIKEIESQAKEEADKKSREIIGYAIQKCAADHVAETTVTVVSLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRREIARIALEKLIADGRIHPARIEEMVEKARKEVDNIIKEYGEQAAFETSVHGIHPELI
RLLGRLNYRTSYGQNVLKHSIEVAHIAGIMAAEIGADIRLAKRAGLLHDIGKAVDHEMEGTHVEIGMDLLRRYKESKEVI
HAMSTHHGDYEPQTVEAVLVTAADAISAARPGARRETLEAYIKRLEKLEEIANSYEGVEKSFAIQAGREIRIMVKPEAIN
DEEIHLLARDMTKKIEDELEYPGQIKVSIIRETRAIEYAK

Sequences:

>Translated_520_residues
MGLLTKEVDVIDSVVMIVIGAAVGIIAGYFVRKNISEAKIGQAENLAKEIIDKAHHDSETVQKEKLLEAKEEIHKWRTEA
ERENRERRTEVQKYEKRVVQKEEVLDRKLQNLESKEVNLSEKLKVVEKKEEEVEVIKTQQLEKLESISGITSDKAKEIIL
TNAERDVRREMSIMIKEIESQAKEEADKKSREIIGYAIQKCAADHVAETTVTVVSLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRREIARIALEKLIADGRIHPARIEEMVEKARKEVDNIIKEYGEQAAFETSVHGIHPELI
RLLGRLNYRTSYGQNVLKHSIEVAHIAGIMAAEIGADIRLAKRAGLLHDIGKAVDHEMEGTHVEIGMDLLRRYKESKEVI
HAMSTHHGDYEPQTVEAVLVTAADAISAARPGARRETLEAYIKRLEKLEEIANSYEGVEKSFAIQAGREIRIMVKPEAIN
DEEIHLLARDMTKKIEDELEYPGQIKVSIIRETRAIEYAK
>Mature_519_residues
GLLTKEVDVIDSVVMIVIGAAVGIIAGYFVRKNISEAKIGQAENLAKEIIDKAHHDSETVQKEKLLEAKEEIHKWRTEAE
RENRERRTEVQKYEKRVVQKEEVLDRKLQNLESKEVNLSEKLKVVEKKEEEVEVIKTQQLEKLESISGITSDKAKEIILT
NAERDVRREMSIMIKEIESQAKEEADKKSREIIGYAIQKCAADHVAETTVTVVSLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRREIARIALEKLIADGRIHPARIEEMVEKARKEVDNIIKEYGEQAAFETSVHGIHPELIR
LLGRLNYRTSYGQNVLKHSIEVAHIAGIMAAEIGADIRLAKRAGLLHDIGKAVDHEMEGTHVEIGMDLLRRYKESKEVIH
AMSTHHGDYEPQTVEAVLVTAADAISAARPGARRETLEAYIKRLEKLEEIANSYEGVEKSFAIQAGREIRIMVKPEAIND
EEIHLLARDMTKKIEDELEYPGQIKVSIIRETRAIEYAK

Specific function: Catalyzes the hydrolysis of both 2',3'-cyclic AMP and 2',3'-cyclic GMP into 3'-AMP and 3'-GMP, respectively, at the 3'- terminal of RNA

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CNPD_CLOD6 (Q18BJ3)

Other databases:

- EMBL:   AM180355
- RefSeq:   YP_001087825.1
- ProteinModelPortal:   Q18BJ3
- SMR:   Q18BJ3
- STRING:   Q18BJ3
- GeneID:   4914616
- GenomeReviews:   AM180355_GR
- KEGG:   cdf:CD1329
- NMPDR:   fig|1496.1.peg.3403
- eggNOG:   COG1418
- HOGENOM:   HBG734610
- OMA:   HPGRIEE
- ProtClustDB:   PRK12704
- HAMAP:   MF_00335
- InterPro:   IPR017705
- InterPro:   IPR022711
- InterPro:   IPR004087
- InterPro:   IPR004088
- InterPro:   IPR018111
- InterPro:   IPR003607
- InterPro:   IPR006675
- SMART:   SM00471
- SMART:   SM00322
- TIGRFAMs:   TIGR00277
- TIGRFAMs:   TIGR03319

Pfam domain/function: PF12072 DUF3552; PF00013 KH_1

EC number: =3.1.4.16

Molecular weight: Translated: 58891; Mature: 58760

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe79ad10)-;

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLLTKEVDVIDSVVMIVIGAAVGIIAGYFVRKNISEAKIGQAENLAKEIIDKAHHDSET
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCHHH
VQKEKLLEAKEEIHKWRTEAERENRERRTEVQKYEKRVVQKEEVLDRKLQNLESKEVNLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHH
EKLKVVEKKEEEVEVIKTQQLEKLESISGITSDKAKEIILTNAERDVRREMSIMIKEIES
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEECCHHHHHHHHHHHHHHHHH
QAKEEADKKSREIIGYAIQKCAADHVAETTVTVVSLPNDEMKGRIIGREGRNIRTLETLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCEECCCCCCEEHHHHHC
GIDLIIDDTPEAVILSGFDPIRREIARIALEKLIADGRIHPARIEEMVEKARKEVDNIIK
CCEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
EYGEQAAFETSVHGIHPELIRLLGRLNYRTSYGQNVLKHSIEVAHIAGIMAAEIGADIRL
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
AKRAGLLHDIGKAVDHEMEGTHVEIGMDLLRRYKESKEVIHAMSTHHGDYEPQTVEAVLV
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
TAADAISAARPGARRETLEAYIKRLEKLEEIANSYEGVEKSFAIQAGREIRIMVKPEAIN
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
DEEIHLLARDMTKKIEDELEYPGQIKVSIIRETRAIEYAK
CHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHCCCH
>Mature Secondary Structure 
GLLTKEVDVIDSVVMIVIGAAVGIIAGYFVRKNISEAKIGQAENLAKEIIDKAHHDSET
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCHHH
VQKEKLLEAKEEIHKWRTEAERENRERRTEVQKYEKRVVQKEEVLDRKLQNLESKEVNLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHH
EKLKVVEKKEEEVEVIKTQQLEKLESISGITSDKAKEIILTNAERDVRREMSIMIKEIES
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEECCHHHHHHHHHHHHHHHHH
QAKEEADKKSREIIGYAIQKCAADHVAETTVTVVSLPNDEMKGRIIGREGRNIRTLETLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCEECCCCCCEEHHHHHC
GIDLIIDDTPEAVILSGFDPIRREIARIALEKLIADGRIHPARIEEMVEKARKEVDNIIK
CCEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
EYGEQAAFETSVHGIHPELIRLLGRLNYRTSYGQNVLKHSIEVAHIAGIMAAEIGADIRL
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
AKRAGLLHDIGKAVDHEMEGTHVEIGMDLLRRYKESKEVIHAMSTHHGDYEPQTVEAVLV
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
TAADAISAARPGARRETLEAYIKRLEKLEEIANSYEGVEKSFAIQAGREIRIMVKPEAIN
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
DEEIHLLARDMTKKIEDELEYPGQIKVSIIRETRAIEYAK
CHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA