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The map label for this gene is 126698907

Identifier: 126698907

GI number: 126698907

Start: 1518190

End: 1518501

Strand: Direct

Name: 126698907

Synonym: CD1308

Alternate gene names: NA

Gene position: 1518190-1518501 (Clockwise)

Preceding gene: 126698906

Following gene: 126698908

Centisome position: 35.39

GC content: 27.24

Gene sequence:

>312_bases
ATGAAAAATAATAAAGAAAAAGTACTTTCGTTCTTAGGGCTCGCAACTCGTGCAGGGAAAATAGTGTCTGGTGATGATTC
AACTTTGCTTGACCTTAAAAAAGGAAAAGTAAATTTGATTTTAATCGCAGAAGATGCATCAAATAATACTAAAAAACTTT
TTAAAGATAAATCAACTTTTAGAAATATTCCATATCTATTTTTTTCAACAAAAGAGGAAATAGGATTTGCAATAGGAAAA
TCTCCAAGAGCAGTTGTAGGAATAAAAGATGAAAATTTTTCTAAAAAGATAATTGAACTAATAGAAATTTAA

Upstream 100 bases:

>100_bases
TGTCTAAAAAAAGCTATAAAGAGTAAAGCATTAAATAAAGCTTTTAAAATAGATGTTCCTGATGAAGTCTATGATAATCT
ACTTATGGAGTTAGAAGAAT

Downstream 100 bases:

>100_bases
AATAAAATAGGGGGTGATCTTGTGTCAAAAACAAGAGTATACCAAATAGCAGAAGAATTAAATATATCAAATGAAGAGCT
TATAAATAAGTTAGCTGAAT

Product: ribosomal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MKNNKEKVLSFLGLATRAGKIVSGDDSTLLDLKKGKVNLILIAEDASNNTKKLFKDKSTFRNIPYLFFSTKEEIGFAIGK
SPRAVVGIKDENFSKKIIELIEI

Sequences:

>Translated_103_residues
MKNNKEKVLSFLGLATRAGKIVSGDDSTLLDLKKGKVNLILIAEDASNNTKKLFKDKSTFRNIPYLFFSTKEEIGFAIGK
SPRAVVGIKDENFSKKIIELIEI
>Mature_103_residues
MKNNKEKVLSFLGLATRAGKIVSGDDSTLLDLKKGKVNLILIAEDASNNTKKLFKDKSTFRNIPYLFFSTKEEIGFAIGK
SPRAVVGIKDENFSKKIIELIEI

Specific function: Unknown

COG id: COG1358

COG function: function code J; Ribosomal protein HS6-type (S12/L30/L7a)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L7Ae family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004038 [H]

Pfam domain/function: PF01248 Ribosomal_L7Ae [H]

EC number: NA

Molecular weight: Translated: 11463; Mature: 11463

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNKEKVLSFLGLATRAGKIVSGDDSTLLDLKKGKVNLILIAEDASNNTKKLFKDKSTF
CCCCHHHHHHHHHHHHHCCEEEECCCCEEEEECCCCEEEEEEEECCCCCHHHHHHCCHHH
RNIPYLFFSTKEEIGFAIGKSPRAVVGIKDENFSKKIIELIEI
CCCCEEEEECCHHHCEEECCCCCEEEEECCCCHHHHHHHHHCC
>Mature Secondary Structure
MKNNKEKVLSFLGLATRAGKIVSGDDSTLLDLKKGKVNLILIAEDASNNTKKLFKDKSTF
CCCCHHHHHHHHHHHHHCCEEEECCCCEEEEECCCCEEEEEEEECCCCCHHHHHHCCHHH
RNIPYLFFSTKEEIGFAIGKSPRAVVGIKDENFSKKIIELIEI
CCCCEEEEECCHHHCEEECCCCCEEEEECCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3063954 [H]