Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698812

Identifier: 126698812

GI number: 126698812

Start: 1414973

End: 1415848

Strand: Direct

Name: 126698812

Synonym: CD1216

Alternate gene names: NA

Gene position: 1414973-1415848 (Clockwise)

Preceding gene: 126698811

Following gene: 126698813

Centisome position: 32.98

GC content: 26.03

Gene sequence:

>876_bases
ATGCATATTAATATGAAATATTATATAGTCACTATAGGGGCTATATTTATAGCTTTGGGTATAGGCATGTTAGTAGGATT
TAATTTAAATAATAATCAACAATTAAGTGAACAACAAGCAAACATAATAAATGATTTGGATGATAAGTTTAATATCTTAA
AAGAAAAAAATGATAAACTTGACAGTGACTTAGCAAGTGTAAATAGAGATTATGAAGAGGCAGTTAATTTTATAAATAAA
AATGTAGATAAGATTTTAGCTGGTTCGCTGAATGGTAAAAGTATAGGAATAATATCTGCTAATGAAAATGACGATTATAC
AAAAAATATAGAAGACATAATAAATAAATCTAATGGAAGCATTGCATTTAATATAATATTAAAAGAAAACATAACAAATC
CAGAAAAGTTAAAGGAAATGTCAACTAAACTAGGTACAGATGTAAAAAATGCAAATGATGCAGTTAATTATATAATTGAC
ACTCTTAAAAAGGAAGATGCAAGTGACATTTTAACATATCTTCAAGAACTAGATGTAATAAAGTTTAATTTTATTGGAGA
TACATATCTAAAATATGATTCCGTTGTAATAGCTGGTGGAAATGATGCAAAAGACAGTACAAAACAGTTTGAAAAAATAG
AAAAATTTGTAGTTTCAAAACTTAAATCAGAGAATAAATATTTAGTAGAAGTTCAAAATACAGGAGTTAAAACTTCTTAT
GTAGAACTATATTCTAAAAACAAAGTTGCAACTATAGACAATATTGATGAAGGTATAGGAAGTATATCTCTAGCGATTCT
TCTACAACAAGGTAATATAGTTGGTAATTTTGGTAGATTGGATACTGCAACTTCATTGTTGCCATCTATTAAATAG

Upstream 100 bases:

>100_bases
TGGTAGTTGCATCATTGTCACCAGGAGTTCAACAGTTCATACAACTAATGCAATTAAAGTTTAGAGTATTATTACAGATG
TAAATTTTAGGAGGATAAAT

Downstream 100 bases:

>100_bases
AAATAATTTTAAGGAGAGAAAAAATGGATTCTTATATAAGTATAATAATACCAGCTTATAATGAAGAAAGTAGAATAAAA
TATACATTAGAAAGCATATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MHINMKYYIVTIGAIFIALGIGMLVGFNLNNNQQLSEQQANIINDLDDKFNILKEKNDKLDSDLASVNRDYEEAVNFINK
NVDKILAGSLNGKSIGIISANENDDYTKNIEDIINKSNGSIAFNIILKENITNPEKLKEMSTKLGTDVKNANDAVNYIID
TLKKEDASDILTYLQELDVIKFNFIGDTYLKYDSVVIAGGNDAKDSTKQFEKIEKFVVSKLKSENKYLVEVQNTGVKTSY
VELYSKNKVATIDNIDEGIGSISLAILLQQGNIVGNFGRLDTATSLLPSIK

Sequences:

>Translated_291_residues
MHINMKYYIVTIGAIFIALGIGMLVGFNLNNNQQLSEQQANIINDLDDKFNILKEKNDKLDSDLASVNRDYEEAVNFINK
NVDKILAGSLNGKSIGIISANENDDYTKNIEDIINKSNGSIAFNIILKENITNPEKLKEMSTKLGTDVKNANDAVNYIID
TLKKEDASDILTYLQELDVIKFNFIGDTYLKYDSVVIAGGNDAKDSTKQFEKIEKFVVSKLKSENKYLVEVQNTGVKTSY
VELYSKNKVATIDNIDEGIGSISLAILLQQGNIVGNFGRLDTATSLLPSIK
>Mature_291_residues
MHINMKYYIVTIGAIFIALGIGMLVGFNLNNNQQLSEQQANIINDLDDKFNILKEKNDKLDSDLASVNRDYEEAVNFINK
NVDKILAGSLNGKSIGIISANENDDYTKNIEDIINKSNGSIAFNIILKENITNPEKLKEMSTKLGTDVKNANDAVNYIID
TLKKEDASDILTYLQELDVIKFNFIGDTYLKYDSVVIAGGNDAKDSTKQFEKIEKFVVSKLKSENKYLVEVQNTGVKTSY
VELYSKNKVATIDNIDEGIGSISLAILLQQGNIVGNFGRLDTATSLLPSIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32296; Mature: 32296

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHINMKYYIVTIGAIFIALGIGMLVGFNLNNNQQLSEQQANIINDLDDKFNILKEKNDKL
CEEEEEEHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
DSDLASVNRDYEEAVNFINKNVDKILAGSLNGKSIGIISANENDDYTKNIEDIINKSNGS
HHHHHHHCCCHHHHHHHHHCCHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCC
IAFNIILKENITNPEKLKEMSTKLGTDVKNANDAVNYIIDTLKKEDASDILTYLQELDVI
EEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCE
KFNFIGDTYLKYDSVVIAGGNDAKDSTKQFEKIEKFVVSKLKSENKYLVEVQNTGVKTSY
EEEECCCCEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEHH
VELYSKNKVATIDNIDEGIGSISLAILLQQGNIVGNFGRLDTATSLLPSIK
HHHHCCCCEEECCCHHHHHHHEEEEEEEECCCEEECCCCHHHHHHHCCCCC
>Mature Secondary Structure
MHINMKYYIVTIGAIFIALGIGMLVGFNLNNNQQLSEQQANIINDLDDKFNILKEKNDKL
CEEEEEEHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
DSDLASVNRDYEEAVNFINKNVDKILAGSLNGKSIGIISANENDDYTKNIEDIINKSNGS
HHHHHHHCCCHHHHHHHHHCCHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCC
IAFNIILKENITNPEKLKEMSTKLGTDVKNANDAVNYIIDTLKKEDASDILTYLQELDVI
EEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCE
KFNFIGDTYLKYDSVVIAGGNDAKDSTKQFEKIEKFVVSKLKSENKYLVEVQNTGVKTSY
EEEECCCCEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEHH
VELYSKNKVATIDNIDEGIGSISLAILLQQGNIVGNFGRLDTATSLLPSIK
HHHHCCCCEEECCCHHHHHHHEEEEEEEECCCEEECCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA