| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698648
Identifier: 126698648
GI number: 126698648
Start: 1256079
End: 1256285
Strand: Direct
Name: 126698648
Synonym: CD1063A
Alternate gene names: NA
Gene position: 1256079-1256285 (Clockwise)
Preceding gene: 126698647
Following gene: 126698649
Centisome position: 29.28
GC content: 28.02
Gene sequence:
>207_bases ATGACAAAATTAGAAGACAATATGGAACGTTTCTTTGGAGGATGCGAAGGATTTTTTGGGAATAAAATGTTGATAATAAT AGTTATAGTATTCTTACTATTATGCACAGACATTTTAGAAGACTTATTATGCGATGACAATATATGGATATGGGTTATAT TAATAGTATTGTTATTATTTAACTTCGATGATGGTTGTTGTTGCTAA
Upstream 100 bases:
>100_bases TCAATAAAAACTTTTTAGAAGTAACTTATCTGTCTATTACTACATATATTTAATTAAAGAGACAAAACTTAGTCTCTTAA TGATTCAAGGAGGATTAGTT
Downstream 100 bases:
>100_bases AAAATATTGATTATTAAATAGGTAAAACCAGTAACTTATACAAGTTATGGTTTTACCTTTTTTAGTTCAAATTAAAAAAT TTAAAAAAATAGTAAAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 68; Mature: 67
Protein sequence:
>68_residues MTKLEDNMERFFGGCEGFFGNKMLIIIVIVFLLLCTDILEDLLCDDNIWIWVILIVLLLFNFDDGCCC
Sequences:
>Translated_68_residues MTKLEDNMERFFGGCEGFFGNKMLIIIVIVFLLLCTDILEDLLCDDNIWIWVILIVLLLFNFDDGCCC >Mature_67_residues TKLEDNMERFFGGCEGFFGNKMLIIIVIVFLLLCTDILEDLLCDDNIWIWVILIVLLLFNFDDGCCC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7885; Mature: 7753
Theoretical pI: Translated: 3.63; Mature: 3.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.8 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 13.2 %Cys+Met (Translated Protein) 9.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 11.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLEDNMERFFGGCEGFFGNKMLIIIVIVFLLLCTDILEDLLCDDNIWIWVILIVLLLF CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH NFDDGCCC CCCCCCCC >Mature Secondary Structure TKLEDNMERFFGGCEGFFGNKMLIIIVIVFLLLCTDILEDLLCDDNIWIWVILIVLLLF CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH NFDDGCCC CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA