| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698519
Identifier: 126698519
GI number: 126698519
Start: 1111060
End: 1111638
Strand: Direct
Name: 126698519
Synonym: CD0940
Alternate gene names: NA
Gene position: 1111060-1111638 (Clockwise)
Preceding gene: 126698518
Following gene: 126698520
Centisome position: 25.9
GC content: 29.36
Gene sequence:
>579_bases ATGCTAGGAGAGCTGGAGGAAGAAGAAGTTAAAAAAATTCTCTCCAGTTTTTCTTGTCCCCTTAATAAAGATGTAGAAGA ATTTTTAAAAAACAAAGCTATTGAATTTTCTAAACAAGGTTTGGCTAGTACACATTTAGTGCTAACTTCTTATAAAGGCA AGCCTGTTATAGTTGGATATTTCACTCTAGCTAATAAGTATTTTACAATAAAAAGAAAAACATTATCAAACTCTTTAGCT AGGAAAATAGTGAAGTTTGGACAATACAATGAAGAACTAAGAAGATATATTATTGGAGCACCTTTGATAGGGCAAATAGG AAAGAATTATTCAAATAATTATAATAAATTAATCAAGGGTGATGAACTTCTAAAAATTGCATGTGACAAGATAAAAGCAG TACAGTTAGATATGGGTGGGAAAATAGTGTACCTTGAATGTGAAGATAAACCTAAATTAATTGAATTTTATAAGGATAAT GGATTTGTAGACTTTGGAAAAAGAAGCCTTGATAAAGACGAAACAGATTCGTTAGATGGGGACTATTTAGTTCAAATGTT GAAATATCTAAAAAAATAA
Upstream 100 bases:
>100_bases TTGTATTAAGTAAAAAATGTTCAGAAGTACCAAAAGATAAAATAAAGGATATATTCGGGAGATTTTAATGAGTGGCTATT TAATTGTAAACTTAAGTAAT
Downstream 100 bases:
>100_bases AAGTACATAAAATCTAAAATGACTATCTTGATAGATGGTCTTTTTTTATACAATAAATTAAAAGGAGAATGAAATTATGG AGATTAAGAAAAACACACAA
Product: phage protein
Products: NA
Alternate protein names: Acetyltransferase GNAT Family; Phage Protein; Phage-Like Protein
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MLGELEEEEVKKILSSFSCPLNKDVEEFLKNKAIEFSKQGLASTHLVLTSYKGKPVIVGYFTLANKYFTIKRKTLSNSLA RKIVKFGQYNEELRRYIIGAPLIGQIGKNYSNNYNKLIKGDELLKIACDKIKAVQLDMGGKIVYLECEDKPKLIEFYKDN GFVDFGKRSLDKDETDSLDGDYLVQMLKYLKK
Sequences:
>Translated_192_residues MLGELEEEEVKKILSSFSCPLNKDVEEFLKNKAIEFSKQGLASTHLVLTSYKGKPVIVGYFTLANKYFTIKRKTLSNSLA RKIVKFGQYNEELRRYIIGAPLIGQIGKNYSNNYNKLIKGDELLKIACDKIKAVQLDMGGKIVYLECEDKPKLIEFYKDN GFVDFGKRSLDKDETDSLDGDYLVQMLKYLKK >Mature_192_residues MLGELEEEEVKKILSSFSCPLNKDVEEFLKNKAIEFSKQGLASTHLVLTSYKGKPVIVGYFTLANKYFTIKRKTLSNSLA RKIVKFGQYNEELRRYIIGAPLIGQIGKNYSNNYNKLIKGDELLKIACDKIKAVQLDMGGKIVYLECEDKPKLIEFYKDN GFVDFGKRSLDKDETDSLDGDYLVQMLKYLKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21988; Mature: 21988
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGELEEEEVKKILSSFSCPLNKDVEEFLKNKAIEFSKQGLASTHLVLTSYKGKPVIVGY CCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEE FTLANKYFTIKRKTLSNSLARKIVKFGQYNEELRRYIIGAPLIGQIGKNYSNNYNKLIKG EEECCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHCC DELLKIACDKIKAVQLDMGGKIVYLECEDKPKLIEFYKDNGFVDFGKRSLDKDETDSLDG HHHHHHHHHHHHEEEEECCCEEEEEEECCCCCEEEEECCCCEEECCHHCCCCCCCCCCCH DYLVQMLKYLKK HHHHHHHHHHCC >Mature Secondary Structure MLGELEEEEVKKILSSFSCPLNKDVEEFLKNKAIEFSKQGLASTHLVLTSYKGKPVIVGY CCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEE FTLANKYFTIKRKTLSNSLARKIVKFGQYNEELRRYIIGAPLIGQIGKNYSNNYNKLIKG EEECCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHCC DELLKIACDKIKAVQLDMGGKIVYLECEDKPKLIEFYKDNGFVDFGKRSLDKDETDSLDG HHHHHHHHHHHHEEEEECCCEEEEEEECCCCCEEEEECCCCEEECCHHCCCCCCCCCCCH DYLVQMLKYLKK HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA