| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698509
Identifier: 126698509
GI number: 126698509
Start: 1106070
End: 1106441
Strand: Direct
Name: 126698509
Synonym: CD0931
Alternate gene names: NA
Gene position: 1106070-1106441 (Clockwise)
Preceding gene: 126698508
Following gene: 126698510
Centisome position: 25.78
GC content: 29.03
Gene sequence:
>372_bases ATGTTTAGCATCTATAAAGTGAAACTAAAGACTAAAAGAACATTGGAACAGGTAAGAAATCAAAGTGCAGACTTTGAGTA TTCAGAAGAAGGATTAAAAAATACACTTAGATATTACAACTTGATTGATGGTTTAGAAGTAATTGTAGTTAAGTTTAAAG ATGAATATTCCCTAGCTGGTTGTGATGAAAAAGATGTAGAAAAAATAAGAGATGCATATTATATTTTAGAACAAGATGAA TATTTTGGGTGTTATATAAATGAATATGAACGATTTAAAAAAGATTGGGAAAATGGTGAATGTGGTGGGGAAATTGGTAT GATGTTTTCAGATGATGAAGTTGAGATAATTGAGAAATTAAGGGAGGGTTAA
Upstream 100 bases:
>100_bases AAAGAGATTTGTGCTAGTTGTATAAATGATAAAGGAGATTGTGAAAGTAAAGATTGTGATATAGCATATGAGAACTGGCT GGAGAAGGAGATTGTAAATT
Downstream 100 bases:
>100_bases ATATGAATTTTAAATTAATTAGTGATATACCAGATTGGACAATAGAGGAACAGTTAGCGAAGATTGATGAAGAAGTTACA GAACTTAAAGAAGCAATCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MFSIYKVKLKTKRTLEQVRNQSADFEYSEEGLKNTLRYYNLIDGLEVIVVKFKDEYSLAGCDEKDVEKIRDAYYILEQDE YFGCYINEYERFKKDWENGECGGEIGMMFSDDEVEIIEKLREG
Sequences:
>Translated_123_residues MFSIYKVKLKTKRTLEQVRNQSADFEYSEEGLKNTLRYYNLIDGLEVIVVKFKDEYSLAGCDEKDVEKIRDAYYILEQDE YFGCYINEYERFKKDWENGECGGEIGMMFSDDEVEIIEKLREG >Mature_123_residues MFSIYKVKLKTKRTLEQVRNQSADFEYSEEGLKNTLRYYNLIDGLEVIVVKFKDEYSLAGCDEKDVEKIRDAYYILEQDE YFGCYINEYERFKKDWENGECGGEIGMMFSDDEVEIIEKLREG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14653; Mature: 14653
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSIYKVKLKTKRTLEQVRNQSADFEYSEEGLKNTLRYYNLIDGLEVIVVKFKDEYSLAG CCCEEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC CDEKDVEKIRDAYYILEQDEYFGCYINEYERFKKDWENGECGGEIGMMFSDDEVEIIEKL CCHHHHHHHHHHHHEECCCCCCCEEHHHHHHHHHCCCCCCCCCEECEEECCCHHHHHHHH REG HCC >Mature Secondary Structure MFSIYKVKLKTKRTLEQVRNQSADFEYSEEGLKNTLRYYNLIDGLEVIVVKFKDEYSLAG CCCEEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC CDEKDVEKIRDAYYILEQDEYFGCYINEYERFKKDWENGECGGEIGMMFSDDEVEIIEKL CCHHHHHHHHHHHHEECCCCCCCEEHHHHHHHHHCCCCCCCCCEECEEECCCHHHHHHHH REG HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA