Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698444

Identifier: 126698444

GI number: 126698444

Start: 1044087

End: 1044536

Strand: Direct

Name: 126698444

Synonym: CD0867

Alternate gene names: NA

Gene position: 1044087-1044536 (Clockwise)

Preceding gene: 126698443

Following gene: 126698446

Centisome position: 24.34

GC content: 24.44

Gene sequence:

>450_bases
ATGAAAAACAAAAATAATAAAGATAAAACCATGTTGAATATTAAAGTATTGAGAGTTCTAGGAGTGCTATTAATACTTTT
TGATTATACGGGTGATACTTTGAATTTTTATAATTTCTTCGCAAAGCCATTAGTATCGGGTAATTTATATAAGACAACAG
GTACTGACTGCATTGTATTTTTATTATTTATTGTAGAGTGTGTATACCTAGTGGGAAGATATATATTAAAAGTTAAGATA
AATTGGAGTGAGATTATTGAAAATGAGAAAGGTAATTTTATAAATAACTTGTTGGTTGAAAAAATACAAGAAGAAAGCAA
CATTGTATATAATTTATTAAACTCATATGTGTTGCCACATATATATAAGAAAGCAAGGGGATTGATGTTTAAAACATATC
ATATGTTAATCTACATTAAAGAAAAATACTATTATGTAAATATATATTAA

Upstream 100 bases:

>100_bases
GTAAAAATGAAAATAACTACCAATTAAATTCATTTATACCTCAAATAAAAGAGTTAGTATTAGATTACAATCAAATCTAA
AGAAAAGAGAGGTAGTATAT

Downstream 100 bases:

>100_bases
TATAATATGATTGCACAATTAATTATATTATATTTTGTATTGGATGATAAAATGAAAGACATAAATTTTTTGAGACACTA
AAATCGCAATTTATTTCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MKNKNNKDKTMLNIKVLRVLGVLLILFDYTGDTLNFYNFFAKPLVSGNLYKTTGTDCIVFLLFIVECVYLVGRYILKVKI
NWSEIIENEKGNFINNLLVEKIQEESNIVYNLLNSYVLPHIYKKARGLMFKTYHMLIYIKEKYYYVNIY

Sequences:

>Translated_149_residues
MKNKNNKDKTMLNIKVLRVLGVLLILFDYTGDTLNFYNFFAKPLVSGNLYKTTGTDCIVFLLFIVECVYLVGRYILKVKI
NWSEIIENEKGNFINNLLVEKIQEESNIVYNLLNSYVLPHIYKKARGLMFKTYHMLIYIKEKYYYVNIY
>Mature_149_residues
MKNKNNKDKTMLNIKVLRVLGVLLILFDYTGDTLNFYNFFAKPLVSGNLYKTTGTDCIVFLLFIVECVYLVGRYILKVKI
NWSEIIENEKGNFINNLLVEKIQEESNIVYNLLNSYVLPHIYKKARGLMFKTYHMLIYIKEKYYYVNIY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17679; Mature: 17679

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKNNKDKTMLNIKVLRVLGVLLILFDYTGDTLNFYNFFAKPLVSGNLYKTTGTDCIVF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCHHHHHH
LLFIVECVYLVGRYILKVKINWSEIIENEKGNFINNLLVEKIQEESNIVYNLLNSYVLPH
HHHHHHHHHHHHHHHEEEEECHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYKKARGLMFKTYHMLIYIKEKYYYVNIY
HHHHHCCCHHEEEEEEEEEEEEEEEEEEC
>Mature Secondary Structure
MKNKNNKDKTMLNIKVLRVLGVLLILFDYTGDTLNFYNFFAKPLVSGNLYKTTGTDCIVF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCHHHHHH
LLFIVECVYLVGRYILKVKINWSEIIENEKGNFINNLLVEKIQEESNIVYNLLNSYVLPH
HHHHHHHHHHHHHHHEEEEECHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYKKARGLMFKTYHMLIYIKEKYYYVNIY
HHHHHCCCHHEEEEEEEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA