Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

Click here to switch to the map view.

The map label for this gene is celA [H]

Identifier: 126698438

GI number: 126698438

Start: 1038062

End: 1038388

Strand: Direct

Name: celA [H]

Synonym: CD0861

Alternate gene names: 126698438

Gene position: 1038062-1038388 (Clockwise)

Preceding gene: 126698437

Following gene: 126698439

Centisome position: 24.2

GC content: 29.97

Gene sequence:

>327_bases
ATGAATATTTTATTAGTATGTGCAAATGGAGCTTCAACAGGTGTACTTGTGGAAAAGATGAAAAGTTTTTGTAGTGAGCA
TGAAAAGTTAAAAACTAAAACTATAAATATAGAGGCAACATCATTTGAAAATTTAAAATCATACATTGAAGCTAATGATA
CAGATGTAGTACTTGTAGCACCACAAATTAGGTTTAAGGAAGATGATGTAGTTGAAGCTTGTAAGAATTACAAAATAGCA
GTTGGTTTAATAGATACTAAGCATTATGGTCGTATGGATGCTCCTTCTGTTATGAAGTCGGCAATCGAATTATATAAAAA
TAGATAA

Upstream 100 bases:

>100_bases
AATAATAAGAATTAAAGTAAAAACTGATAGGAATTAGAGTAAGAATTGGCTGATAAAAAATTAGAAAACAAAAGAGGTTA
GATATTGTAGGAGGGTAATT

Downstream 100 bases:

>100_bases
TTGGGGGGAATAAAAATGGAAGCACTTCAAAATAATTTAAGAAGATTTCTTCTTCCAATAGCACAAAAGATTGAAAAACA
AAGGCATCTTCAAGCTATAA

Product: PTS system transporter subunit IIB

Products: NA

Alternate protein names: EIIB-Cel; PTS system cellobiose-specific EIIB component [H]

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MNILLVCANGASTGVLVEKMKSFCSEHEKLKTKTINIEATSFENLKSYIEANDTDVVLVAPQIRFKEDDVVEACKNYKIA
VGLIDTKHYGRMDAPSVMKSAIELYKNR

Sequences:

>Translated_108_residues
MNILLVCANGASTGVLVEKMKSFCSEHEKLKTKTINIEATSFENLKSYIEANDTDVVLVAPQIRFKEDDVVEACKNYKIA
VGLIDTKHYGRMDAPSVMKSAIELYKNR
>Mature_108_residues
MNILLVCANGASTGVLVEKMKSFCSEHEKLKTKTINIEATSFENLKSYIEANDTDVVLVAPQIRFKEDDVVEACKNYKIA
VGLIDTKHYGRMDAPSVMKSAIELYKNR

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: COG1440

COG function: function code G; Phosphotransferase system cellobiose-specific component IIB

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-3 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014350
- InterPro:   IPR003501
- InterPro:   IPR013012 [H]

Pfam domain/function: PF02302 PTS_IIB [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 12087; Mature: 12087

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS51100 PTS_EIIB_TYPE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILLVCANGASTGVLVEKMKSFCSEHEKLKTKTINIEATSFENLKSYIEANDTDVVLVA
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHCCCCCCEEEEC
PQIRFKEDDVVEACKNYKIAVGLIDTKHYGRMDAPSVMKSAIELYKNR
CCCCCCCCHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MNILLVCANGASTGVLVEKMKSFCSEHEKLKTKTINIEATSFENLKSYIEANDTDVVLVA
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHCCCCCCEEEEC
PQIRFKEDDVVEACKNYKIAVGLIDTKHYGRMDAPSVMKSAIELYKNR
CCCCCCCCHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8407820 [H]