| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
Click here to switch to the map view.
The map label for this gene is celA [H]
Identifier: 126698438
GI number: 126698438
Start: 1038062
End: 1038388
Strand: Direct
Name: celA [H]
Synonym: CD0861
Alternate gene names: 126698438
Gene position: 1038062-1038388 (Clockwise)
Preceding gene: 126698437
Following gene: 126698439
Centisome position: 24.2
GC content: 29.97
Gene sequence:
>327_bases ATGAATATTTTATTAGTATGTGCAAATGGAGCTTCAACAGGTGTACTTGTGGAAAAGATGAAAAGTTTTTGTAGTGAGCA TGAAAAGTTAAAAACTAAAACTATAAATATAGAGGCAACATCATTTGAAAATTTAAAATCATACATTGAAGCTAATGATA CAGATGTAGTACTTGTAGCACCACAAATTAGGTTTAAGGAAGATGATGTAGTTGAAGCTTGTAAGAATTACAAAATAGCA GTTGGTTTAATAGATACTAAGCATTATGGTCGTATGGATGCTCCTTCTGTTATGAAGTCGGCAATCGAATTATATAAAAA TAGATAA
Upstream 100 bases:
>100_bases AATAATAAGAATTAAAGTAAAAACTGATAGGAATTAGAGTAAGAATTGGCTGATAAAAAATTAGAAAACAAAAGAGGTTA GATATTGTAGGAGGGTAATT
Downstream 100 bases:
>100_bases TTGGGGGGAATAAAAATGGAAGCACTTCAAAATAATTTAAGAAGATTTCTTCTTCCAATAGCACAAAAGATTGAAAAACA AAGGCATCTTCAAGCTATAA
Product: PTS system transporter subunit IIB
Products: NA
Alternate protein names: EIIB-Cel; PTS system cellobiose-specific EIIB component [H]
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MNILLVCANGASTGVLVEKMKSFCSEHEKLKTKTINIEATSFENLKSYIEANDTDVVLVAPQIRFKEDDVVEACKNYKIA VGLIDTKHYGRMDAPSVMKSAIELYKNR
Sequences:
>Translated_108_residues MNILLVCANGASTGVLVEKMKSFCSEHEKLKTKTINIEATSFENLKSYIEANDTDVVLVAPQIRFKEDDVVEACKNYKIA VGLIDTKHYGRMDAPSVMKSAIELYKNR >Mature_108_residues MNILLVCANGASTGVLVEKMKSFCSEHEKLKTKTINIEATSFENLKSYIEANDTDVVLVAPQIRFKEDDVVEACKNYKIA VGLIDTKHYGRMDAPSVMKSAIELYKNR
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1440
COG function: function code G; Phosphotransferase system cellobiose-specific component IIB
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-3 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014350 - InterPro: IPR003501 - InterPro: IPR013012 [H]
Pfam domain/function: PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 12087; Mature: 12087
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: PS51100 PTS_EIIB_TYPE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILLVCANGASTGVLVEKMKSFCSEHEKLKTKTINIEATSFENLKSYIEANDTDVVLVA CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHCCCCCCEEEEC PQIRFKEDDVVEACKNYKIAVGLIDTKHYGRMDAPSVMKSAIELYKNR CCCCCCCCHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MNILLVCANGASTGVLVEKMKSFCSEHEKLKTKTINIEATSFENLKSYIEANDTDVVLVA CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHCCCCCCEEEEC PQIRFKEDDVVEACKNYKIAVGLIDTKHYGRMDAPSVMKSAIELYKNR CCCCCCCCHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8407820 [H]