| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698416
Identifier: 126698416
GI number: 126698416
Start: 1013096
End: 1013590
Strand: Direct
Name: 126698416
Synonym: CD0836
Alternate gene names: NA
Gene position: 1013096-1013590 (Clockwise)
Preceding gene: 126698415
Following gene: 126698417
Centisome position: 23.61
GC content: 26.87
Gene sequence:
>495_bases ATGATTAGAAAAGCGAATATGAATGATTTAGAAAGCATTATGAAAATTATAAAATCTACAGTGGAAGAAATGAAGACTTA TAATAATACACAATGGGATGAAAACTATCCATTAGAAAAAGACTTTGTTTCAGATATTAAGAAACAAGATTTATATATTT ATGAAGTGGATGGAGAAGTAGCAGGGTTTATATGTCTTAATTATGAAGAGCCAGAAGAATATTTAGGCTTAAATTGGTCA TCTAATAAAAAAGCAATGGTAATACATAGAATGGCTGTAAATCCAAACTTTAGAAAGACAGGAATAGCATCTAAGTTAGT TGATTTTGCTGAAAAATTAGCTGTAGAAAACAATGTATCATACTTAAAGAGCGATACATATTCAATAAACTCAAAAATGA ATTTATTACTTACAAAGTGTGGTTTTATAAAAATCGGAGAAATGAGTTTTTTAGGAAAGGAGAAATCTTTCTACTGTTAT GATAAAATATTATAA
Upstream 100 bases:
>100_bases GGTAACTAAGTTATTAGAAAAAATGAGCAAAAACGTAGAAAATGAATGGTTTAAAGTAAAGAGATAGTAAATAAATACAT TAACTTAAGGAGATATTTTT
Downstream 100 bases:
>100_bases AGAGCATTTACAATACAAGGGGTAAATAATAGATTTTCAGCATTAGTAAGGGCATAATATAACCTAGTATATGCTATTAT GAAAGGGATGATTTATATGA
Product: acetyltransferase
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Acetyltransferase GNAT Family; GNAT Family Acetyltransferase; Acetyltransferase Gnat Family; Gcn5-Related N-Acetyltransferase; Acetyltransferase Family
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MIRKANMNDLESIMKIIKSTVEEMKTYNNTQWDENYPLEKDFVSDIKKQDLYIYEVDGEVAGFICLNYEEPEEYLGLNWS SNKKAMVIHRMAVNPNFRKTGIASKLVDFAEKLAVENNVSYLKSDTYSINSKMNLLLTKCGFIKIGEMSFLGKEKSFYCY DKIL
Sequences:
>Translated_164_residues MIRKANMNDLESIMKIIKSTVEEMKTYNNTQWDENYPLEKDFVSDIKKQDLYIYEVDGEVAGFICLNYEEPEEYLGLNWS SNKKAMVIHRMAVNPNFRKTGIASKLVDFAEKLAVENNVSYLKSDTYSINSKMNLLLTKCGFIKIGEMSFLGKEKSFYCY DKIL >Mature_164_residues MIRKANMNDLESIMKIIKSTVEEMKTYNNTQWDENYPLEKDFVSDIKKQDLYIYEVDGEVAGFICLNYEEPEEYLGLNWS SNKKAMVIHRMAVNPNFRKTGIASKLVDFAEKLAVENNVSYLKSDTYSINSKMNLLLTKCGFIKIGEMSFLGKEKSFYCY DKIL
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19066; Mature: 19066
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRKANMNDLESIMKIIKSTVEEMKTYNNTQWDENYPLEKDFVSDIKKQDLYIYEVDGEV CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCEEEEEECCCE AGFICLNYEEPEEYLGLNWSSNKKAMVIHRMAVNPNFRKTGIASKLVDFAEKLAVENNVS EEEEEECCCCCHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHH YLKSDTYSINSKMNLLLTKCGFIKIGEMSFLGKEKSFYCYDKIL HHHCCCEECCCCCEEEEEECCCEEECCCCCCCCCCCEEEEECCC >Mature Secondary Structure MIRKANMNDLESIMKIIKSTVEEMKTYNNTQWDENYPLEKDFVSDIKKQDLYIYEVDGEV CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCEEEEEECCCE AGFICLNYEEPEEYLGLNWSSNKKAMVIHRMAVNPNFRKTGIASKLVDFAEKLAVENNVS EEEEEECCCCCHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHH YLKSDTYSINSKMNLLLTKCGFIKIGEMSFLGKEKSFYCYDKIL HHHCCCEECCCCCEEEEEECCCEEECCCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA