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The map label for this gene is rbo

Identifier: 126698407

GI number: 126698407

Start: 1001301

End: 1001687

Strand: Direct

Name: rbo

Synonym: CD0827

Alternate gene names: NA

Gene position: 1001301-1001687 (Clockwise)

Preceding gene: 126698406

Following gene: 126698408

Centisome position: 23.34

GC content: 35.4

Gene sequence:

>387_bases
ATGTGTAGTGAACAAAAATTTTTTATATGTGAGACTTGTGGAAACCTTGTAGGAATGATACAAAGTGGTGGTGTACCTAT
TTTCTGTTGTGGAAAACCTATGAAGGAACTTGTTCCTAATACAACAGATGCAGCAGTTGAAAAACATGTACCTGTAATTG
AAGTGGATGGAAATAATGTTACTGTTAAAGTAAGTAGCACAACTCATCCAATGACTAAAGAACATCATATAGCATGGGTG
TATCTTATGACTGAACAAGGTGGTCAACGCAAATGTCTAGCAGTAGATGGAGAACCTGTAGTTAAATTTGCTTTGAATGA
TGATGATAAAGTGATTTCTGCCTATGCTTACTGTAATTTACATGGATTATGGAAGGCTGAACTGTAA

Upstream 100 bases:

>100_bases
ATCTTATAACATAAGTTTTAAAGGGATTTGTAATAATTGTAAAAGGTGTAGCCAAGTAGGTTAGTTTTCAAATTCTAAAA
ATAATTAATGAGGTGAGTTT

Downstream 100 bases:

>100_bases
TATTTAAATAAATTGAGTCAAAAAGGAGGCTATAAATGTATTTTCATACAAATAGCCTCCTATAAATTTATATAAATTCA
AGTTTTAATTTTGTTTAATG

Product: rubredoxin oxidoreductase

Products: NA

Alternate protein names: Dfx [H]

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MCSEQKFFICETCGNLVGMIQSGGVPIFCCGKPMKELVPNTTDAAVEKHVPVIEVDGNNVTVKVSSTTHPMTKEHHIAWV
YLMTEQGGQRKCLAVDGEPVVKFALNDDDKVISAYAYCNLHGLWKAEL

Sequences:

>Translated_128_residues
MCSEQKFFICETCGNLVGMIQSGGVPIFCCGKPMKELVPNTTDAAVEKHVPVIEVDGNNVTVKVSSTTHPMTKEHHIAWV
YLMTEQGGQRKCLAVDGEPVVKFALNDDDKVISAYAYCNLHGLWKAEL
>Mature_128_residues
MCSEQKFFICETCGNLVGMIQSGGVPIFCCGKPMKELVPNTTDAAVEKHVPVIEVDGNNVTVKVSSTTHPMTKEHHIAWV
YLMTEQGGQRKCLAVDGEPVVKFALNDDDKVISAYAYCNLHGLWKAEL

Specific function: Unknown

COG id: COG2033

COG function: function code C; Desulfoferrodoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the desulfoferrodoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002742
- InterPro:   IPR004462
- InterPro:   IPR004793 [H]

Pfam domain/function: PF06397 Desulfoferrod_N; PF01880 Desulfoferrodox [H]

EC number: NA

Molecular weight: Translated: 14057; Mature: 14057

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
9.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCSEQKFFICETCGNLVGMIQSGGVPIFCCGKPMKELVPNTTDAAVEKHVPVIEVDGNNV
CCCCCEEEEEEHHCHHHHHHHCCCEEEEECCCCHHHHCCCCCCHHHHHCCCEEEECCCEE
TVKVSSTTHPMTKEHHIAWVYLMTEQGGQRKCLAVDGEPVVKFALNDDDKVISAYAYCNL
EEEECCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCEEEEEECCCCCEEEEEEEEEE
HGLWKAEL
CEEEEECC
>Mature Secondary Structure
MCSEQKFFICETCGNLVGMIQSGGVPIFCCGKPMKELVPNTTDAAVEKHVPVIEVDGNNV
CCCCCEEEEEEHHCHHHHHHHCCCEEEEECCCCHHHHCCCCCCHHHHHCCCEEEECCCEE
TVKVSSTTHPMTKEHHIAWVYLMTEQGGQRKCLAVDGEPVVKFALNDDDKVISAYAYCNL
EEEECCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCEEEEEECCCCCEEEEEEEEEE
HGLWKAEL
CEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]