Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698360

Identifier: 126698360

GI number: 126698360

Start: 950454

End: 951389

Strand: Direct

Name: 126698360

Synonym: CD0780

Alternate gene names: NA

Gene position: 950454-951389 (Clockwise)

Preceding gene: 126698359

Following gene: 126698362

Centisome position: 22.15

GC content: 33.76

Gene sequence:

>936_bases
ATGATATTAAAACAAGTAATAGAGGTTTATGACATTTTAGATAAAGCAAATGCTAATGGGGAAGAAGTAAAAACTTACTT
ACAAGGTTATGGTGAAGTAGATGTAACTGTAAAAGAATTGTCTTCAAGTAAAGGTTCAACAGATTTAGTAAAGCTTACAA
TTCCTGGAAAAAATGGAAAATTAAAAGGTGGAGATGCTCCTACTCTTGGTATTTTAGGTAGACTAGGAGGGATTGGAGCA
AGACCAGAAGTTATAGGTTTTGTTTCAGATGGTGATGGAGCATTGGTAGCAATTGCAGTGGCTGCTAAACTTTTGGATAT
GCAACGAAAAGGGGATATATTAGATGGTGATGTTGTAATTTCAACTCATATTTGCCCAGATGCTCCAACTAAAGAACACT
ATCCTACTCCTTTTATGGATTCTCCAATTGATATGATGACTATGAATGAAAATGAAGTTGATAGTAGTTGTGATGCAATA
CTTTCTATAGATACTACTAAAGGAAATAGAGTAATCAATACTAGAGGATTTGCAATATCGCCAACTGTTAAAGAAGGCTA
CATATTAAAAACTAGTGATAACCTTTTAGATATTATGCAGACTGTAACAGGGAAATCTCCATTTGTATTCCCTTTGTCTA
TTCAAGATATAACACCATATGGAAATAATCTGTATCACTTAAATAGTATTTTACAACCAGCAGTAGCTACAGATGCACCA
ATAGTAGGAGTAGCAATTACAACAGAGATGCCTGTTGCTGGATGTGCTACAGGTGCAACTAATTTTAGTGATTTAGATTC
AGCTGGGAGATTTGCAATTGAAGTTGCCAAGCTATTTGGTAGAAATAAGTGTGATTTCTATGATAAAGAAGAGTGGGAAA
TGCTTATTAAGAGATATGGCAAATTAAATAGATTTCAAACATTTGGTATACAGTAA

Upstream 100 bases:

>100_bases
ATAAAAGCAATTAAGGTGTTAGCAATGTGTGGAGTAGATATTTTGTATAGTAAATAATATATAATTTTAAAATATATTAA
GAAAGGAAATCGGATTAGAC

Downstream 100 bases:

>100_bases
TTAGAAAAATATTAAGTTTATATAATTTGTGATATAACTATTTAAGAATATATAAACAATTAGGAATAAAAGTAAGAATA
AAGCACTTAGTTAAAAACTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MILKQVIEVYDILDKANANGEEVKTYLQGYGEVDVTVKELSSSKGSTDLVKLTIPGKNGKLKGGDAPTLGILGRLGGIGA
RPEVIGFVSDGDGALVAIAVAAKLLDMQRKGDILDGDVVISTHICPDAPTKEHYPTPFMDSPIDMMTMNENEVDSSCDAI
LSIDTTKGNRVINTRGFAISPTVKEGYILKTSDNLLDIMQTVTGKSPFVFPLSIQDITPYGNNLYHLNSILQPAVATDAP
IVGVAITTEMPVAGCATGATNFSDLDSAGRFAIEVAKLFGRNKCDFYDKEEWEMLIKRYGKLNRFQTFGIQ

Sequences:

>Translated_311_residues
MILKQVIEVYDILDKANANGEEVKTYLQGYGEVDVTVKELSSSKGSTDLVKLTIPGKNGKLKGGDAPTLGILGRLGGIGA
RPEVIGFVSDGDGALVAIAVAAKLLDMQRKGDILDGDVVISTHICPDAPTKEHYPTPFMDSPIDMMTMNENEVDSSCDAI
LSIDTTKGNRVINTRGFAISPTVKEGYILKTSDNLLDIMQTVTGKSPFVFPLSIQDITPYGNNLYHLNSILQPAVATDAP
IVGVAITTEMPVAGCATGATNFSDLDSAGRFAIEVAKLFGRNKCDFYDKEEWEMLIKRYGKLNRFQTFGIQ
>Mature_311_residues
MILKQVIEVYDILDKANANGEEVKTYLQGYGEVDVTVKELSSSKGSTDLVKLTIPGKNGKLKGGDAPTLGILGRLGGIGA
RPEVIGFVSDGDGALVAIAVAAKLLDMQRKGDILDGDVVISTHICPDAPTKEHYPTPFMDSPIDMMTMNENEVDSSCDAI
LSIDTTKGNRVINTRGFAISPTVKEGYILKTSDNLLDIMQTVTGKSPFVFPLSIQDITPYGNNLYHLNSILQPAVATDAP
IVGVAITTEMPVAGCATGATNFSDLDSAGRFAIEVAKLFGRNKCDFYDKEEWEMLIKRYGKLNRFQTFGIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33533; Mature: 33533

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILKQVIEVYDILDKANANGEEVKTYLQGYGEVDVTVKELSSSKGSTDLVKLTIPGKNGK
CHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEHHHHCCCCCCCEEEEEEECCCCCE
LKGGDAPTLGILGRLGGIGARPEVIGFVSDGDGALVAIAVAAKLLDMQRKGDILDGDVVI
ECCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHCCCCCCCCEEE
STHICPDAPTKEHYPTPFMDSPIDMMTMNENEVDSSCDAILSIDTTKGNRVINTRGFAIS
EEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCEEEEECCEEEC
PTVKEGYILKTSDNLLDIMQTVTGKSPFVFPLSIQDITPYGNNLYHLNSILQPAVATDAP
CCCCCCEEEECCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCEEEHHHHHHHHHHCCCC
IVGVAITTEMPVAGCATGATNFSDLDSAGRFAIEVAKLFGRNKCDFYDKEEWEMLIKRYG
EEEEEEECCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHC
KLNRFQTFGIQ
CCCCCEECCCC
>Mature Secondary Structure
MILKQVIEVYDILDKANANGEEVKTYLQGYGEVDVTVKELSSSKGSTDLVKLTIPGKNGK
CHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEHHHHCCCCCCCEEEEEEECCCCCE
LKGGDAPTLGILGRLGGIGARPEVIGFVSDGDGALVAIAVAAKLLDMQRKGDILDGDVVI
ECCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHCCCCCCCCEEE
STHICPDAPTKEHYPTPFMDSPIDMMTMNENEVDSSCDAILSIDTTKGNRVINTRGFAIS
EEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCEEEEECCEEEC
PTVKEGYILKTSDNLLDIMQTVTGKSPFVFPLSIQDITPYGNNLYHLNSILQPAVATDAP
CCCCCCEEEECCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCEEEHHHHHHHHHHCCCC
IVGVAITTEMPVAGCATGATNFSDLDSAGRFAIEVAKLFGRNKCDFYDKEEWEMLIKRYG
EEEEEEECCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHC
KLNRFQTFGIQ
CCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA