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The map label for this gene is spoIIAB [H]

Identifier: 126698351

GI number: 126698351

Start: 942868

End: 943296

Strand: Direct

Name: spoIIAB [H]

Synonym: CD0771

Alternate gene names: 126698351

Gene position: 942868-943296 (Clockwise)

Preceding gene: 126698350

Following gene: 126698352

Centisome position: 21.98

GC content: 32.4

Gene sequence:

>429_bases
ATGAATAATATTATGGAAGTTAAATTTTCGGCAATATCTGAAAATGAAAGTTTAGCAAGAGTTATAGTAGCATCCTTTGC
AGCTAAGTTAGACCCAACAGTAGATGAGTTAGTAGATATAAAAACTGCTGTCTCTGAGGCTGTTACGAATGCTATAATAC
ATGGATATGAAGAAGACAGTTCTAAGTTTGTTTTCTTAAGATGTGAGATAGAAGGAAATACTATAAAGATTATAGTTGAA
GATGAAGGGTATGGAATAGAAAATGTGGAGAAGGCAATGGAACCACTTTATACATCAAAACCAGAACTTGATAGATCAGG
AATGGGATTCACAGTAATGAAAAGCTTTATGGACGATGTAGAGGTAAGTTCTGTAAAAGATAATGGGACTAGAATTGAAA
TGACTAAAAAAATAAATGTGCCTAAATAA

Upstream 100 bases:

>100_bases
CGAGTTAAGAAGATTTTTGATTTATCTGGGTTAAATAAAATTATTGGCATTTATGATACGTATGAAGAAGCTCTAAGTTC
TTTGTAGGGAGGAGTATGTG

Downstream 100 bases:

>100_bases
AGTCCAAAAGTGAGGTTTTATTATGGAAGTAACTGTTGCCAGAGAAGAAAAAAAACCTCTTCTTAGTCATGAAGAGACTC
TAGAACTTATTGAAAAAGTT

Product: anti-sigma F factor

Products: NA

Alternate protein names: Stage II sporulation protein AB [H]

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MNNIMEVKFSAISENESLARVIVASFAAKLDPTVDELVDIKTAVSEAVTNAIIHGYEEDSSKFVFLRCEIEGNTIKIIVE
DEGYGIENVEKAMEPLYTSKPELDRSGMGFTVMKSFMDDVEVSSVKDNGTRIEMTKKINVPK

Sequences:

>Translated_142_residues
MNNIMEVKFSAISENESLARVIVASFAAKLDPTVDELVDIKTAVSEAVTNAIIHGYEEDSSKFVFLRCEIEGNTIKIIVE
DEGYGIENVEKAMEPLYTSKPELDRSGMGFTVMKSFMDDVEVSSVKDNGTRIEMTKKINVPK
>Mature_142_residues
MNNIMEVKFSAISENESLARVIVASFAAKLDPTVDELVDIKTAVSEAVTNAIIHGYEEDSSKFVFLRCEIEGNTIKIIVE
DEGYGIENVEKAMEPLYTSKPELDRSGMGFTVMKSFMDDVEVSSVKDNGTRIEMTKKINVPK

Specific function: Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti-anti-sigma factor that counteracts SpoIIAB and thus releases si

COG id: COG2172

COG function: function code T; Anti-sigma regulatory factor (Ser/Thr protein kinase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the anti-sigma-factor family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010194
- InterPro:   IPR003594 [H]

Pfam domain/function: PF02518 HATPase_c [H]

EC number: =2.7.11.1 [H]

Molecular weight: Translated: 15774; Mature: 15774

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNIMEVKFSAISENESLARVIVASFAAKLDPTVDELVDIKTAVSEAVTNAIIHGYEEDS
CCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
SKFVFLRCEIEGNTIKIIVEDEGYGIENVEKAMEPLYTSKPELDRSGMGFTVMKSFMDDV
CCEEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCC
EVSSVKDNGTRIEMTKKINVPK
CCCCCCCCCCEEEEEEECCCCC
>Mature Secondary Structure
MNNIMEVKFSAISENESLARVIVASFAAKLDPTVDELVDIKTAVSEAVTNAIIHGYEEDS
CCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
SKFVFLRCEIEGNTIKIIVEDEGYGIENVEKAMEPLYTSKPELDRSGMGFTVMKSFMDDV
CCEEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCC
EVSSVKDNGTRIEMTKKINVPK
CCCCCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA