Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is acsC [H]

Identifier: 126698306

GI number: 126698306

Start: 887800

End: 889167

Strand: Direct

Name: acsC [H]

Synonym: CD0726

Alternate gene names: 126698306

Gene position: 887800-889167 (Clockwise)

Preceding gene: 126698305

Following gene: 126698307

Centisome position: 20.69

GC content: 32.75

Gene sequence:

>1368_bases
ATGGCATTAAAAGCTTTAGATATATTTAAATTAACACCAAAGAAAAACTGTAAGGATTGTGGATTCCCAACTTGTATGGC
TTTCTCTATGAAGGTTGCTTCAGGAGCTGTAGAAGTAGGTAAATGCCCACATATGTCTGATGACGCTATAGCAAAATTAT
CAGAGGCTACTGCACCTTTAATGAAAGCTTTAAAAGTTGGTGCTGGTGCATCTGAGTATGAACTAGGTGGAGAAACAGTA
TTATTTAGACATGAAAAAACATTAGTAAGTAGAAATAGATATGCAGTTTCATTCTGTACTTGTATGAGTGATGAAGCAGT
AGATGCTAAAATAGCTAACATGAAAAAAGTTGACTATGTAAGAATTGGTGAACAAATGAAAGTTGAAATGGCTGTTTTAG
AGTATTGTGGAGATAAAGATGCGTATTTAAAATTAATAGATAAAATAAAAGGCAGTGGATTAGAAGTAGCTTATATTTTA
GCTTGTGATGATGCACAAGTAGTTAAAGAAGCTGTTGAAGTATTAAAAGATGCTAGACCAATGGTATATGGAGCAACTAA
AGAGAACTACAAAGATATGATAGAAGTAGTTAAAGGAGCAAGTTTACCATTAGGTGTAAAAGCTGGTAGCTTAGAAGAAT
TATATGAAACAGTTGAATTAATTCAAGCTGCTGGATATAAAGAATTAGTATTAGATGTAACAGGAGAAAACATAAAAGAT
ACTTACACTAATGCTATACAAGTTAGAAGAACAGCTTTAAAAGAGCAAGATAGAACATTTGGATATCCTTCAATAGTATT
TGCAAATAGATTATCTAATTCAAACCCTATGATGGAAGTTGCTTTATCATCAATATTCACTATAAAATACGGTTCTATAA
TAGTAATAGATGATATTAGTTATGCTAAGGCATTACCATTATTTGCACTAAGACAAAACATATACACTGACCCACAAAGA
CCAATGAGAGTTGAACCAAAGATTTATCCAATCAACAACCCAGATGAAAATTCTCCAGTATTAGTTACTGTTGACTTTGC
ATTAACTTACTTCATAGTTGCTGGTGATATAGAAAGATCAAAAGTTCCAGTATGGTTAGTAATACCAGATGCAGGTGGAT
ATTCAGTTCTTACATCTTGGGCTGCTGGTAAATTTGGTGGAAACTCAATCTCTGCTTTCATTAAAGAAAGTAAGGTAGAA
GAAGTAACTAATTGTAAAGACCTTATCATTCCAGGAAAAGTTGCAGTACTTAAAGGTGATATAGAAGATAACTTACCAGG
ATGGAATGTAGTTATAGGACCAGAGGAATCTATGGAATTACCTAAGTTCTTAAAAGGATACCAAGAAAAAGCATGCCAAA
CAAACTAA

Upstream 100 bases:

>100_bases
AAACGCAGTTATACTTCGTCATCCAAAATCAATAGAAACTATAAAAGAATTGGTTAACGCATTAGCTTAATTAAATTGTT
AAGGTTAGGGGGAAAAAATA

Downstream 100 bases:

>100_bases
TAAAATATTAACTAACTATTAATATTAAATTTAAAGGGGGACATTATAAATGGAAAAATTTATGATTATAGGTGAGAGAA
TACATTGTATATCACCTTCA

Product: acetyl-CoA decarbonylase/synthase complex subunit gamma

Products: NA

Alternate protein names: C/Fe-SP [H]

Number of amino acids: Translated: 455; Mature: 454

Protein sequence:

>455_residues
MALKALDIFKLTPKKNCKDCGFPTCMAFSMKVASGAVEVGKCPHMSDDAIAKLSEATAPLMKALKVGAGASEYELGGETV
LFRHEKTLVSRNRYAVSFCTCMSDEAVDAKIANMKKVDYVRIGEQMKVEMAVLEYCGDKDAYLKLIDKIKGSGLEVAYIL
ACDDAQVVKEAVEVLKDARPMVYGATKENYKDMIEVVKGASLPLGVKAGSLEELYETVELIQAAGYKELVLDVTGENIKD
TYTNAIQVRRTALKEQDRTFGYPSIVFANRLSNSNPMMEVALSSIFTIKYGSIIVIDDISYAKALPLFALRQNIYTDPQR
PMRVEPKIYPINNPDENSPVLVTVDFALTYFIVAGDIERSKVPVWLVIPDAGGYSVLTSWAAGKFGGNSISAFIKESKVE
EVTNCKDLIIPGKVAVLKGDIEDNLPGWNVVIGPEESMELPKFLKGYQEKACQTN

Sequences:

>Translated_455_residues
MALKALDIFKLTPKKNCKDCGFPTCMAFSMKVASGAVEVGKCPHMSDDAIAKLSEATAPLMKALKVGAGASEYELGGETV
LFRHEKTLVSRNRYAVSFCTCMSDEAVDAKIANMKKVDYVRIGEQMKVEMAVLEYCGDKDAYLKLIDKIKGSGLEVAYIL
ACDDAQVVKEAVEVLKDARPMVYGATKENYKDMIEVVKGASLPLGVKAGSLEELYETVELIQAAGYKELVLDVTGENIKD
TYTNAIQVRRTALKEQDRTFGYPSIVFANRLSNSNPMMEVALSSIFTIKYGSIIVIDDISYAKALPLFALRQNIYTDPQR
PMRVEPKIYPINNPDENSPVLVTVDFALTYFIVAGDIERSKVPVWLVIPDAGGYSVLTSWAAGKFGGNSISAFIKESKVE
EVTNCKDLIIPGKVAVLKGDIEDNLPGWNVVIGPEESMELPKFLKGYQEKACQTN
>Mature_454_residues
ALKALDIFKLTPKKNCKDCGFPTCMAFSMKVASGAVEVGKCPHMSDDAIAKLSEATAPLMKALKVGAGASEYELGGETVL
FRHEKTLVSRNRYAVSFCTCMSDEAVDAKIANMKKVDYVRIGEQMKVEMAVLEYCGDKDAYLKLIDKIKGSGLEVAYILA
CDDAQVVKEAVEVLKDARPMVYGATKENYKDMIEVVKGASLPLGVKAGSLEELYETVELIQAAGYKELVLDVTGENIKDT
YTNAIQVRRTALKEQDRTFGYPSIVFANRLSNSNPMMEVALSSIFTIKYGSIIVIDDISYAKALPLFALRQNIYTDPQRP
MRVEPKIYPINNPDENSPVLVTVDFALTYFIVAGDIERSKVPVWLVIPDAGGYSVLTSWAAGKFGGNSISAFIKESKVEE
VTNCKDLIIPGKVAVLKGDIEDNLPGWNVVIGPEESMELPKFLKGYQEKACQTN

Specific function: Acts as a methyl group carrier in the anaerobic acetyl- CoA pathway (Wood/Ljungdahl pathway) of carbon monoxide and carbon dioxide fixation [H]

COG id: COG1456

COG function: function code C; CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016041
- InterPro:   IPR016218
- InterPro:   IPR011005
- InterPro:   IPR007202 [H]

Pfam domain/function: PF03599 CdhD; PF04060 FeS [H]

EC number: NA

Molecular weight: Translated: 49939; Mature: 49808

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALKALDIFKLTPKKNCKDCGFPTCMAFSMKVASGAVEVGKCPHMSDDAIAKLSEATAPL
CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHH
MKALKVGAGASEYELGGETVLFRHEKTLVSRNRYAVSFCTCMSDEAVDAKIANMKKVDYV
HHHHHHCCCCCCEECCCCEEEEEEHHHHHCCCCEEEEEEEECCCCCHHHHHHCCCCCCEE
RIGEQMKVEMAVLEYCGDKDAYLKLIDKIKGSGLEVAYILACDDAQVVKEAVEVLKDARP
ECCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCC
MVYGATKENYKDMIEVVKGASLPLGVKAGSLEELYETVELIQAAGYKELVLDVTGENIKD
EEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHH
TYTNAIQVRRTALKEQDRTFGYPSIVFANRLSNSNPMMEVALSSIFTIKYGSIIVIDDIS
HHHHHHHHHHHHHHHHCCCCCCCHHHEEHHCCCCCCHHHHHHHHHEEEECCCEEEEECCC
YAKALPLFALRQNIYTDPQRPMRVEPKIYPINNPDENSPVLVTVDFALTYFIVAGDIERS
HHHHHHHHHHHHHHCCCCCCCEECCCEEEECCCCCCCCCEEEEEHHHEEEEEEECCCCCC
KVPVWLVIPDAGGYSVLTSWAAGKFGGNSISAFIKESKVEEVTNCKDLIIPGKVAVLKGD
CCCEEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHEEECCEEEEEECC
IEDNLPGWNVVIGPEESMELPKFLKGYQEKACQTN
CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ALKALDIFKLTPKKNCKDCGFPTCMAFSMKVASGAVEVGKCPHMSDDAIAKLSEATAPL
CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHH
MKALKVGAGASEYELGGETVLFRHEKTLVSRNRYAVSFCTCMSDEAVDAKIANMKKVDYV
HHHHHHCCCCCCEECCCCEEEEEEHHHHHCCCCEEEEEEEECCCCCHHHHHHCCCCCCEE
RIGEQMKVEMAVLEYCGDKDAYLKLIDKIKGSGLEVAYILACDDAQVVKEAVEVLKDARP
ECCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCC
MVYGATKENYKDMIEVVKGASLPLGVKAGSLEELYETVELIQAAGYKELVLDVTGENIKD
EEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHH
TYTNAIQVRRTALKEQDRTFGYPSIVFANRLSNSNPMMEVALSSIFTIKYGSIIVIDDIS
HHHHHHHHHHHHHHHHCCCCCCCHHHEEHHCCCCCCHHHHHHHHHEEEECCCEEEEECCC
YAKALPLFALRQNIYTDPQRPMRVEPKIYPINNPDENSPVLVTVDFALTYFIVAGDIERS
HHHHHHHHHHHHHHCCCCCCCEECCCEEEECCCCCCCCCEEEEEHHHEEEEEEECCCCCC
KVPVWLVIPDAGGYSVLTSWAAGKFGGNSISAFIKESKVEEVTNCKDLIIPGKVAVLKGD
CCCEEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHEEECCEEEEEECC
IEDNLPGWNVVIGPEESMELPKFLKGYQEKACQTN
CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8449924; 2911576 [H]