| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is acsC [H]
Identifier: 126698306
GI number: 126698306
Start: 887800
End: 889167
Strand: Direct
Name: acsC [H]
Synonym: CD0726
Alternate gene names: 126698306
Gene position: 887800-889167 (Clockwise)
Preceding gene: 126698305
Following gene: 126698307
Centisome position: 20.69
GC content: 32.75
Gene sequence:
>1368_bases ATGGCATTAAAAGCTTTAGATATATTTAAATTAACACCAAAGAAAAACTGTAAGGATTGTGGATTCCCAACTTGTATGGC TTTCTCTATGAAGGTTGCTTCAGGAGCTGTAGAAGTAGGTAAATGCCCACATATGTCTGATGACGCTATAGCAAAATTAT CAGAGGCTACTGCACCTTTAATGAAAGCTTTAAAAGTTGGTGCTGGTGCATCTGAGTATGAACTAGGTGGAGAAACAGTA TTATTTAGACATGAAAAAACATTAGTAAGTAGAAATAGATATGCAGTTTCATTCTGTACTTGTATGAGTGATGAAGCAGT AGATGCTAAAATAGCTAACATGAAAAAAGTTGACTATGTAAGAATTGGTGAACAAATGAAAGTTGAAATGGCTGTTTTAG AGTATTGTGGAGATAAAGATGCGTATTTAAAATTAATAGATAAAATAAAAGGCAGTGGATTAGAAGTAGCTTATATTTTA GCTTGTGATGATGCACAAGTAGTTAAAGAAGCTGTTGAAGTATTAAAAGATGCTAGACCAATGGTATATGGAGCAACTAA AGAGAACTACAAAGATATGATAGAAGTAGTTAAAGGAGCAAGTTTACCATTAGGTGTAAAAGCTGGTAGCTTAGAAGAAT TATATGAAACAGTTGAATTAATTCAAGCTGCTGGATATAAAGAATTAGTATTAGATGTAACAGGAGAAAACATAAAAGAT ACTTACACTAATGCTATACAAGTTAGAAGAACAGCTTTAAAAGAGCAAGATAGAACATTTGGATATCCTTCAATAGTATT TGCAAATAGATTATCTAATTCAAACCCTATGATGGAAGTTGCTTTATCATCAATATTCACTATAAAATACGGTTCTATAA TAGTAATAGATGATATTAGTTATGCTAAGGCATTACCATTATTTGCACTAAGACAAAACATATACACTGACCCACAAAGA CCAATGAGAGTTGAACCAAAGATTTATCCAATCAACAACCCAGATGAAAATTCTCCAGTATTAGTTACTGTTGACTTTGC ATTAACTTACTTCATAGTTGCTGGTGATATAGAAAGATCAAAAGTTCCAGTATGGTTAGTAATACCAGATGCAGGTGGAT ATTCAGTTCTTACATCTTGGGCTGCTGGTAAATTTGGTGGAAACTCAATCTCTGCTTTCATTAAAGAAAGTAAGGTAGAA GAAGTAACTAATTGTAAAGACCTTATCATTCCAGGAAAAGTTGCAGTACTTAAAGGTGATATAGAAGATAACTTACCAGG ATGGAATGTAGTTATAGGACCAGAGGAATCTATGGAATTACCTAAGTTCTTAAAAGGATACCAAGAAAAAGCATGCCAAA CAAACTAA
Upstream 100 bases:
>100_bases AAACGCAGTTATACTTCGTCATCCAAAATCAATAGAAACTATAAAAGAATTGGTTAACGCATTAGCTTAATTAAATTGTT AAGGTTAGGGGGAAAAAATA
Downstream 100 bases:
>100_bases TAAAATATTAACTAACTATTAATATTAAATTTAAAGGGGGACATTATAAATGGAAAAATTTATGATTATAGGTGAGAGAA TACATTGTATATCACCTTCA
Product: acetyl-CoA decarbonylase/synthase complex subunit gamma
Products: NA
Alternate protein names: C/Fe-SP [H]
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MALKALDIFKLTPKKNCKDCGFPTCMAFSMKVASGAVEVGKCPHMSDDAIAKLSEATAPLMKALKVGAGASEYELGGETV LFRHEKTLVSRNRYAVSFCTCMSDEAVDAKIANMKKVDYVRIGEQMKVEMAVLEYCGDKDAYLKLIDKIKGSGLEVAYIL ACDDAQVVKEAVEVLKDARPMVYGATKENYKDMIEVVKGASLPLGVKAGSLEELYETVELIQAAGYKELVLDVTGENIKD TYTNAIQVRRTALKEQDRTFGYPSIVFANRLSNSNPMMEVALSSIFTIKYGSIIVIDDISYAKALPLFALRQNIYTDPQR PMRVEPKIYPINNPDENSPVLVTVDFALTYFIVAGDIERSKVPVWLVIPDAGGYSVLTSWAAGKFGGNSISAFIKESKVE EVTNCKDLIIPGKVAVLKGDIEDNLPGWNVVIGPEESMELPKFLKGYQEKACQTN
Sequences:
>Translated_455_residues MALKALDIFKLTPKKNCKDCGFPTCMAFSMKVASGAVEVGKCPHMSDDAIAKLSEATAPLMKALKVGAGASEYELGGETV LFRHEKTLVSRNRYAVSFCTCMSDEAVDAKIANMKKVDYVRIGEQMKVEMAVLEYCGDKDAYLKLIDKIKGSGLEVAYIL ACDDAQVVKEAVEVLKDARPMVYGATKENYKDMIEVVKGASLPLGVKAGSLEELYETVELIQAAGYKELVLDVTGENIKD TYTNAIQVRRTALKEQDRTFGYPSIVFANRLSNSNPMMEVALSSIFTIKYGSIIVIDDISYAKALPLFALRQNIYTDPQR PMRVEPKIYPINNPDENSPVLVTVDFALTYFIVAGDIERSKVPVWLVIPDAGGYSVLTSWAAGKFGGNSISAFIKESKVE EVTNCKDLIIPGKVAVLKGDIEDNLPGWNVVIGPEESMELPKFLKGYQEKACQTN >Mature_454_residues ALKALDIFKLTPKKNCKDCGFPTCMAFSMKVASGAVEVGKCPHMSDDAIAKLSEATAPLMKALKVGAGASEYELGGETVL FRHEKTLVSRNRYAVSFCTCMSDEAVDAKIANMKKVDYVRIGEQMKVEMAVLEYCGDKDAYLKLIDKIKGSGLEVAYILA CDDAQVVKEAVEVLKDARPMVYGATKENYKDMIEVVKGASLPLGVKAGSLEELYETVELIQAAGYKELVLDVTGENIKDT YTNAIQVRRTALKEQDRTFGYPSIVFANRLSNSNPMMEVALSSIFTIKYGSIIVIDDISYAKALPLFALRQNIYTDPQRP MRVEPKIYPINNPDENSPVLVTVDFALTYFIVAGDIERSKVPVWLVIPDAGGYSVLTSWAAGKFGGNSISAFIKESKVEE VTNCKDLIIPGKVAVLKGDIEDNLPGWNVVIGPEESMELPKFLKGYQEKACQTN
Specific function: Acts as a methyl group carrier in the anaerobic acetyl- CoA pathway (Wood/Ljungdahl pathway) of carbon monoxide and carbon dioxide fixation [H]
COG id: COG1456
COG function: function code C; CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016041 - InterPro: IPR016218 - InterPro: IPR011005 - InterPro: IPR007202 [H]
Pfam domain/function: PF03599 CdhD; PF04060 FeS [H]
EC number: NA
Molecular weight: Translated: 49939; Mature: 49808
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKALDIFKLTPKKNCKDCGFPTCMAFSMKVASGAVEVGKCPHMSDDAIAKLSEATAPL CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHH MKALKVGAGASEYELGGETVLFRHEKTLVSRNRYAVSFCTCMSDEAVDAKIANMKKVDYV HHHHHHCCCCCCEECCCCEEEEEEHHHHHCCCCEEEEEEEECCCCCHHHHHHCCCCCCEE RIGEQMKVEMAVLEYCGDKDAYLKLIDKIKGSGLEVAYILACDDAQVVKEAVEVLKDARP ECCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCC MVYGATKENYKDMIEVVKGASLPLGVKAGSLEELYETVELIQAAGYKELVLDVTGENIKD EEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHH TYTNAIQVRRTALKEQDRTFGYPSIVFANRLSNSNPMMEVALSSIFTIKYGSIIVIDDIS HHHHHHHHHHHHHHHHCCCCCCCHHHEEHHCCCCCCHHHHHHHHHEEEECCCEEEEECCC YAKALPLFALRQNIYTDPQRPMRVEPKIYPINNPDENSPVLVTVDFALTYFIVAGDIERS HHHHHHHHHHHHHHCCCCCCCEECCCEEEECCCCCCCCCEEEEEHHHEEEEEEECCCCCC KVPVWLVIPDAGGYSVLTSWAAGKFGGNSISAFIKESKVEEVTNCKDLIIPGKVAVLKGD CCCEEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHEEECCEEEEEECC IEDNLPGWNVVIGPEESMELPKFLKGYQEKACQTN CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure ALKALDIFKLTPKKNCKDCGFPTCMAFSMKVASGAVEVGKCPHMSDDAIAKLSEATAPL CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHH MKALKVGAGASEYELGGETVLFRHEKTLVSRNRYAVSFCTCMSDEAVDAKIANMKKVDYV HHHHHHCCCCCCEECCCCEEEEEEHHHHHCCCCEEEEEEEECCCCCHHHHHHCCCCCCEE RIGEQMKVEMAVLEYCGDKDAYLKLIDKIKGSGLEVAYILACDDAQVVKEAVEVLKDARP ECCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCC MVYGATKENYKDMIEVVKGASLPLGVKAGSLEELYETVELIQAAGYKELVLDVTGENIKD EEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHH TYTNAIQVRRTALKEQDRTFGYPSIVFANRLSNSNPMMEVALSSIFTIKYGSIIVIDDIS HHHHHHHHHHHHHHHHCCCCCCCHHHEEHHCCCCCCHHHHHHHHHEEEECCCEEEEECCC YAKALPLFALRQNIYTDPQRPMRVEPKIYPINNPDENSPVLVTVDFALTYFIVAGDIERS HHHHHHHHHHHHHHCCCCCCCEECCCEEEECCCCCCCCCEEEEEHHHEEEEEEECCCCCC KVPVWLVIPDAGGYSVLTSWAAGKFGGNSISAFIKESKVEEVTNCKDLIIPGKVAVLKGD CCCEEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHEEECCEEEEEECC IEDNLPGWNVVIGPEESMELPKFLKGYQEKACQTN CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8449924; 2911576 [H]