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The map label for this gene is yqjQ [H]

Identifier: 126698270

GI number: 126698270

Start: 838776

End: 839555

Strand: Direct

Name: yqjQ [H]

Synonym: CD0691

Alternate gene names: 126698270

Gene position: 838776-839555 (Clockwise)

Preceding gene: 126698269

Following gene: 126698273

Centisome position: 19.55

GC content: 29.49

Gene sequence:

>780_bases
ATGAGTTATAAGAAGATTGCAATTATAACGGGTGCTAATAGTGGTTTTGGTAAAGAGTTTCTAAAGTTATTAATAAATGA
AGAAGAAATAACAGAAATATGGGCAGTTGCAAGAAACAAGGCGAGATTAAATCAATTAGTAGATGAATTTGGAAGTAAGG
TAAAAATTTTTTCAAAAGATTTATCAAAAATAGAAGAAGTAAAAGAAATTGGTACATTTTTAAGTAAAGAAAATGTATGT
ATAAAATACCTTATAAACAATGCTGGTTTTGCAAAATTCTGTTCATACAATGATTTAAGTATAGATGAATCTATTAATAT
GATTGATTTAAATATTAGTGCTGTTGTAGCATTGGGACTTATATGTATTCCATATATGCAAAAGGGAAGCCATATCATGA
ATATTTCTTCACAAGCATCATTCCAGCCATTGCCATATCAAAATATTTATAGTTCAACTAAAGCGTTTATAAGAAATTAT
ACAAGAGCATTAAATGTTGAACTTAAGAGTAAAGGGATAAATGCAATTGCTGTATGTCCAGGCTGGATGAGTACAAATCT
ATTTAAGAGAGGTATAGTTGTAGCTGAAAAAGGGACAAAAAATTTCCCGGGCATAGTGTCTCCAGACGTTGTTGCCAAAA
AAGCATTGAAGGATGCAAAGAAAAATAAGGATATTTCTGTGTATGGTATAAATACAAAATCCAGTCATTTATTAGCAAAA
CTATTGCCACAAAAAATGATGATGAAGGTTTGGTTAATGCAACAACATATTAAGGAATAA

Upstream 100 bases:

>100_bases
CTCAAATGATATGAATATAACATCTGAATAGAGGGTGTTTTATTTGTAAAAAATAAGTTTACAGTTTGAGCGTATAAACT
TATGGCAAAGGAGAATAATT

Downstream 100 bases:

>100_bases
GAGTTTCGGTAATTAAGTATCAGTTGGAGATTCAATCTGTTATATATTATGAGAATTTTTGTTGAGCAGATAATAATTGT
GGCAAAACGGCTTATCTAGT

Product: short chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MSYKKIAIITGANSGFGKEFLKLLINEEEITEIWAVARNKARLNQLVDEFGSKVKIFSKDLSKIEEVKEIGTFLSKENVC
IKYLINNAGFAKFCSYNDLSIDESINMIDLNISAVVALGLICIPYMQKGSHIMNISSQASFQPLPYQNIYSSTKAFIRNY
TRALNVELKSKGINAIAVCPGWMSTNLFKRGIVVAEKGTKNFPGIVSPDVVAKKALKDAKKNKDISVYGINTKSSHLLAK
LLPQKMMMKVWLMQQHIKE

Sequences:

>Translated_259_residues
MSYKKIAIITGANSGFGKEFLKLLINEEEITEIWAVARNKARLNQLVDEFGSKVKIFSKDLSKIEEVKEIGTFLSKENVC
IKYLINNAGFAKFCSYNDLSIDESINMIDLNISAVVALGLICIPYMQKGSHIMNISSQASFQPLPYQNIYSSTKAFIRNY
TRALNVELKSKGINAIAVCPGWMSTNLFKRGIVVAEKGTKNFPGIVSPDVVAKKALKDAKKNKDISVYGINTKSSHLLAK
LLPQKMMMKVWLMQQHIKE
>Mature_258_residues
SYKKIAIITGANSGFGKEFLKLLINEEEITEIWAVARNKARLNQLVDEFGSKVKIFSKDLSKIEEVKEIGTFLSKENVCI
KYLINNAGFAKFCSYNDLSIDESINMIDLNISAVVALGLICIPYMQKGSHIMNISSQASFQPLPYQNIYSSTKAFIRNYT
RALNVELKSKGINAIAVCPGWMSTNLFKRGIVVAEKGTKNFPGIVSPDVVAKKALKDAKKNKDISVYGINTKSSHLLAKL
LPQKMMMKVWLMQQHIKE

Specific function: Unknown

COG id: COG0300

COG function: function code R; Short-chain dehydrogenases of various substrate specificities

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI7705855, Length=256, Percent_Identity=28.125, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI226371731, Length=269, Percent_Identity=26.7657992565056, Blast_Score=73, Evalue=2e-13,
Organism=Escherichia coli, GI1787820, Length=213, Percent_Identity=29.5774647887324, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI87082160, Length=187, Percent_Identity=26.7379679144385, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI87082100, Length=198, Percent_Identity=26.2626262626263, Blast_Score=63, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71994604, Length=192, Percent_Identity=28.125, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17562910, Length=198, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6322227, Length=197, Percent_Identity=25.3807106598985, Blast_Score=70, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6322067, Length=206, Percent_Identity=28.6407766990291, Blast_Score=68, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6322226, Length=185, Percent_Identity=25.4054054054054, Blast_Score=67, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24584752, Length=231, Percent_Identity=32.034632034632, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI28571526, Length=197, Percent_Identity=29.9492385786802, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24643142, Length=176, Percent_Identity=31.25, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI161076933, Length=263, Percent_Identity=26.615969581749, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24640442, Length=252, Percent_Identity=27.7777777777778, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24584748, Length=191, Percent_Identity=28.2722513089005, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24584744, Length=195, Percent_Identity=28.2051282051282, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI28574402, Length=195, Percent_Identity=28.2051282051282, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21357041, Length=196, Percent_Identity=29.0816326530612, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI23397609, Length=195, Percent_Identity=28.7179487179487, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21358495, Length=271, Percent_Identity=25.0922509225092, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24644339, Length=201, Percent_Identity=26.3681592039801, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21355631, Length=256, Percent_Identity=23.4375, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 28979; Mature: 28848

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYKKIAIITGANSGFGKEFLKLLINEEEITEIWAVARNKARLNQLVDEFGSKVKIFSKD
CCCEEEEEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHH
LSKIEEVKEIGTFLSKENVCIKYLINNAGFAKFCSYNDLSIDESINMIDLNISAVVALGL
HHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCEEEECHHHHHHHHH
ICIPYMQKGSHIMNISSQASFQPLPYQNIYSSTKAFIRNYTRALNVELKSKGINAIAVCP
HHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEECCCCCEEEECC
GWMSTNLFKRGIVVAEKGTKNFPGIVSPDVVAKKALKDAKKNKDISVYGINTKSSHLLAK
CHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHH
LLPQKMMMKVWLMQQHIKE
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SYKKIAIITGANSGFGKEFLKLLINEEEITEIWAVARNKARLNQLVDEFGSKVKIFSKD
CCEEEEEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHH
LSKIEEVKEIGTFLSKENVCIKYLINNAGFAKFCSYNDLSIDESINMIDLNISAVVALGL
HHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCEEEECHHHHHHHHH
ICIPYMQKGSHIMNISSQASFQPLPYQNIYSSTKAFIRNYTRALNVELKSKGINAIAVCP
HHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEECCCCCEEEECC
GWMSTNLFKRGIVVAEKGTKNFPGIVSPDVVAKKALKDAKKNKDISVYGINTKSSHLLAK
CHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHH
LLPQKMMMKVWLMQQHIKE
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]