| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698165
Identifier: 126698165
GI number: 126698165
Start: 704792
End: 705067
Strand: Direct
Name: 126698165
Synonym: CD0587
Alternate gene names: NA
Gene position: 704792-705067 (Clockwise)
Preceding gene: 126698164
Following gene: 126698166
Centisome position: 16.43
GC content: 30.07
Gene sequence:
>276_bases ATGAGTCTTTTTGTTGGTGGATGGTCAAAATTCAGAGCTGTCGAAGAAGAAGATTTAAAAGTATTTAATGAAGCTGTAGG AATGTTAAAAGGGGTTGATTATAAACCGCTTATTGTTTCTACTCAAGTTGTAGCAGGAACAAATTTTAAATTTATTTGCA ATGCTACTTCAGTTACAAATCCTCCACATAATTATTTAGCGGAGATAATTGTTTTTAAACCTCTTCCTTGTGATGAACAT AATGCAACAATTACAAGTATTAATATAATTAAGTAA
Upstream 100 bases:
>100_bases ATGCATTTTCATTGACCAGTTACACAGAGAATATTGAATATTGAGAAAATTAGTACTACTATATATATAAATAAATATAT ATATATAAGGAGGTTTTTAT
Downstream 100 bases:
>100_bases TATTAATAGGAGGTGGAAGATGAGACTAAATGTAACTAAACAAAATACTATAGAGGTTGAAAATAGTAGAAAAGAAGATG TTTATTTTGTAATAGTTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MSLFVGGWSKFRAVEEEDLKVFNEAVGMLKGVDYKPLIVSTQVVAGTNFKFICNATSVTNPPHNYLAEIIVFKPLPCDEH NATITSINIIK
Sequences:
>Translated_91_residues MSLFVGGWSKFRAVEEEDLKVFNEAVGMLKGVDYKPLIVSTQVVAGTNFKFICNATSVTNPPHNYLAEIIVFKPLPCDEH NATITSINIIK >Mature_90_residues SLFVGGWSKFRAVEEEDLKVFNEAVGMLKGVDYKPLIVSTQVVAGTNFKFICNATSVTNPPHNYLAEIIVFKPLPCDEHN ATITSINIIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10072; Mature: 9941
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFVGGWSKFRAVEEEDLKVFNEAVGMLKGVDYKPLIVSTQVVAGTNFKFICNATSVTN CEEEECCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEEEECCCCCC PPHNYLAEIIVFKPLPCDEHNATITSINIIK CCHHHHEEEEEECCCCCCCCCCEEEEEEEEC >Mature Secondary Structure SLFVGGWSKFRAVEEEDLKVFNEAVGMLKGVDYKPLIVSTQVVAGTNFKFICNATSVTN EEEECCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEEEECCCCCC PPHNYLAEIIVFKPLPCDEHNATITSINIIK CCHHHHEEEEEECCCCCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA