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The map label for this gene is tcsA [H]

Identifier: 126698147

GI number: 126698147

Start: 677417

End: 678421

Strand: Direct

Name: tcsA [H]

Synonym: CD0569

Alternate gene names: 126698147

Gene position: 677417-678421 (Clockwise)

Preceding gene: 126698146

Following gene: 126698148

Centisome position: 15.79

GC content: 29.55

Gene sequence:

>1005_bases
ATGCGTTTCAAAAGAATATTGATATTGATGTTAACTGTAGCAATGATAGCTGGAATGTTGGTTGGGTGTGCTAATAACCC
AAGCAATAATCCTAGCTCTAGCAAAGATAATAAAAGTGATATAAGCGATAAAAGTAATTCAAAAAAATCTGTATCAATGA
TACTAGATATTGAAGGAACAAATAATGAAGCTATGAATAATTCAGCTTTATTAGCATTAAACAATGCTCAAAAGAAACTT
AATATAGATACAAACAAAGTGGAATCAGATGATTCCTCAACTTTTTCTAATAGTATAGATATTTTATGTAATGACAATTA
CGATTTAATTATAGCTGTAGGAGCTAGATTTGCAAAACCATTGGAGATGGTAGCCAAGAAATATCCAAAGCAACAATTTG
CAATTATAGACTATGAGTATGACAAGCAACCTTCTAATATAACTTCAATTTCTTATGAAGATAATAAATCTGGATATCTA
GCTGGATTAATTGCTGGAAAAATGACTGAAAGCGATAAGGTTGGTTTTATAGGAGGAACAAAGAGTTCTAGTAGAGATAA
ATTTGAATCAGGTTTTAGAGAGGGTGTTAAATTTTCTAATAGTAGTATAAAGGATATTTCAGTTGAGTATGCAGATGTTT
TTAAAGATAGCAAATCAGTAGAATCTATAGCTAAAAAAATGATGGATAATGGAGTGGATATTATTTTTTCTACTACTGAA
GATGATTCAAAAGCTGTAATAGATGCAGTAAGGGCAAAAAATAAAAAAGTTATAGCAACGAATAAAGACCAACATGAGTT
AGCTCCAGAAAATGTTATAAGTTCTATTGTAAAAGATTTTGAGAATCCTACTTATAATCTGATACAAAGTTTTGTAAAAG
GAAATTATAAAGGCGGAAAAGTTATAGAAAACACAGTTAAGTCTGGAAGTACTGGGCTTGCCCAAAATAGTTTTCAAAAT
ATTCCTCCAGATGTGTTAGAATATGTTAATAAGAACAATAAATAA

Upstream 100 bases:

>100_bases
AAATAAATAGGATGTAAAAGTAAGTAGGATGTAAAAGTAAGTAGGATGTAAAAATAAATAGGATATAAAAATATCGTAAA
TGTATGAGGAGTGAAATTTA

Downstream 100 bases:

>100_bases
TCTACTATAATATCCAAGAATACTTATGACTTTAGTTATGAGGTGAATTGGATGTTATAATAGACATATATAGAAAGACA
TATGCAGAGGTAGGTCAGAC

Product: outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MRFKRILILMLTVAMIAGMLVGCANNPSNNPSSSKDNKSDISDKSNSKKSVSMILDIEGTNNEAMNNSALLALNNAQKKL
NIDTNKVESDDSSTFSNSIDILCNDNYDLIIAVGARFAKPLEMVAKKYPKQQFAIIDYEYDKQPSNITSISYEDNKSGYL
AGLIAGKMTESDKVGFIGGTKSSSRDKFESGFREGVKFSNSSIKDISVEYADVFKDSKSVESIAKKMMDNGVDIIFSTTE
DDSKAVIDAVRAKNKKVIATNKDQHELAPENVISSIVKDFENPTYNLIQSFVKGNYKGGKVIENTVKSGSTGLAQNSFQN
IPPDVLEYVNKNNK

Sequences:

>Translated_334_residues
MRFKRILILMLTVAMIAGMLVGCANNPSNNPSSSKDNKSDISDKSNSKKSVSMILDIEGTNNEAMNNSALLALNNAQKKL
NIDTNKVESDDSSTFSNSIDILCNDNYDLIIAVGARFAKPLEMVAKKYPKQQFAIIDYEYDKQPSNITSISYEDNKSGYL
AGLIAGKMTESDKVGFIGGTKSSSRDKFESGFREGVKFSNSSIKDISVEYADVFKDSKSVESIAKKMMDNGVDIIFSTTE
DDSKAVIDAVRAKNKKVIATNKDQHELAPENVISSIVKDFENPTYNLIQSFVKGNYKGGKVIENTVKSGSTGLAQNSFQN
IPPDVLEYVNKNNK
>Mature_334_residues
MRFKRILILMLTVAMIAGMLVGCANNPSNNPSSSKDNKSDISDKSNSKKSVSMILDIEGTNNEAMNNSALLALNNAQKKL
NIDTNKVESDDSSTFSNSIDILCNDNYDLIIAVGARFAKPLEMVAKKYPKQQFAIIDYEYDKQPSNITSISYEDNKSGYL
AGLIAGKMTESDKVGFIGGTKSSSRDKFESGFREGVKFSNSSIKDISVEYADVFKDSKSVESIAKKMMDNGVDIIFSTTE
DDSKAVIDAVRAKNKKVIATNKDQHELAPENVISSIVKDFENPTYNLIQSFVKGNYKGGKVIENTVKSGSTGLAQNSFQN
IPPDVLEYVNKNNK

Specific function: Unknown

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003760 [H]

Pfam domain/function: PF02608 Bmp [H]

EC number: NA

Molecular weight: Translated: 36638; Mature: 36638

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFKRILILMLTVAMIAGMLVGCANNPSNNPSSSKDNKSDISDKSNSKKSVSMILDIEGT
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEEEEEEECC
NNEAMNNSALLALNNAQKKLNIDTNKVESDDSSTFSNSIDILCNDNYDLIIAVGARFAKP
CCCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCHHHHH
LEMVAKKYPKQQFAIIDYEYDKQPSNITSISYEDNKSGYLAGLIAGKMTESDKVGFIGGT
HHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCEEEEECC
KSSSRDKFESGFREGVKFSNSSIKDISVEYADVFKDSKSVESIAKKMMDNGVDIIFSTTE
CCCCHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCC
DDSKAVIDAVRAKNKKVIATNKDQHELAPENVISSIVKDFENPTYNLIQSFVKGNYKGGK
CCHHHHHHHHHHCCCEEEECCCCHHHCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCH
VIENTVKSGSTGLAQNSFQNIPPDVLEYVNKNNK
HHHHHHHCCCCCCCHHHCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MRFKRILILMLTVAMIAGMLVGCANNPSNNPSSSKDNKSDISDKSNSKKSVSMILDIEGT
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEEEEEEECC
NNEAMNNSALLALNNAQKKLNIDTNKVESDDSSTFSNSIDILCNDNYDLIIAVGARFAKP
CCCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCHHHHH
LEMVAKKYPKQQFAIIDYEYDKQPSNITSISYEDNKSGYLAGLIAGKMTESDKVGFIGGT
HHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCEEEEECC
KSSSRDKFESGFREGVKFSNSSIKDISVEYADVFKDSKSVESIAKKMMDNGVDIIFSTTE
CCCCHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCC
DDSKAVIDAVRAKNKKVIATNKDQHELAPENVISSIVKDFENPTYNLIQSFVKGNYKGGK
CCHHHHHHHHHHCCCEEEECCCCHHHCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCH
VIENTVKSGSTGLAQNSFQNIPPDVLEYVNKNNK
HHHHHHHCCCCCCCHHHCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]