| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
Click here to switch to the map view.
The map label for this gene is cheC [H]
Identifier: 126698113
GI number: 126698113
Start: 639255
End: 639872
Strand: Direct
Name: cheC [H]
Synonym: CD0534
Alternate gene names: 126698113
Gene position: 639255-639872 (Clockwise)
Preceding gene: 126698112
Following gene: 126698114
Centisome position: 14.9
GC content: 29.77
Gene sequence:
>618_bases ATTATAAATTATTTAGAACTTGATGATGTTCATATAGATGCTCTTAGAGAAATTGGTAATATAGGCTCTGGGAATGCAAT TACTGCACTTGCATCCATGATAAATAGCAATGTAGAAGTATTAATACCTATGGTCAAGATACTTGAATATAATGAAGCGA CAAATTTGCTTGGTGGTCCAGAAAACAAAGTAGTATGTATTTTACTCGATATGAAAGGTGATATCAATGGAATGTTTATG TTTTTGTTGGATGAATCAATAACTCAACTTATGCTAAGTTCTCTTTTTAATAAAGAAGAAGCTTTTTTAGATGAGATTGA GGCAATTGAAATTTCAGCAATTAAGGAAATAGGAAATATTATGGCAAGTTCATATGTAAATGCTATTGCATCTATGTTAA ACATGACTATAAGTGTTTCAATTCCAGATATATGTATTGATATGGTTGGAGCTGTTCTAAATGTACCTATGATAAGATTT TCAGATGTTGGTGACAAAGTCTTATTTATAGAAAATAAATTTAAAATGAGTGATAATTATTTTACTAGTCACATTTTGAT GATTCCAGAAATGAGCTCACTTAAAAAGATACTCGTGAGGTTGGGATTAGAGGTATGA
Upstream 100 bases:
>100_bases ACATTAGTTAAAGTTGTAGATAATGCTTTAAAATAAAAGTGTAAATATACACTAATACAATGAAAAGCAAATAAATGCAA TAATAAAGGGAGGGGTTTAT
Downstream 100 bases:
>100_bases ATAGAGAGATAGTAGTGAACATTGCAGATATGAAGATAGCCTATAGACCAAATGTTTTAGTTACTTATGCACTTGGTTCT TGTGTAGGAGTATGTTTGAT
Product: chemotaxis protein CheC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MINYLELDDVHIDALREIGNIGSGNAITALASMINSNVEVLIPMVKILEYNEATNLLGGPENKVVCILLDMKGDINGMFM FLLDESITQLMLSSLFNKEEAFLDEIEAIEISAIKEIGNIMASSYVNAIASMLNMTISVSIPDICIDMVGAVLNVPMIRF SDVGDKVLFIENKFKMSDNYFTSHILMIPEMSSLKKILVRLGLEV
Sequences:
>Translated_205_residues MINYLELDDVHIDALREIGNIGSGNAITALASMINSNVEVLIPMVKILEYNEATNLLGGPENKVVCILLDMKGDINGMFM FLLDESITQLMLSSLFNKEEAFLDEIEAIEISAIKEIGNIMASSYVNAIASMLNMTISVSIPDICIDMVGAVLNVPMIRF SDVGDKVLFIENKFKMSDNYFTSHILMIPEMSSLKKILVRLGLEV >Mature_205_residues MINYLELDDVHIDALREIGNIGSGNAITALASMINSNVEVLIPMVKILEYNEATNLLGGPENKVVCILLDMKGDINGMFM FLLDESITQLMLSSLFNKEEAFLDEIEAIEISAIKEIGNIMASSYVNAIASMLNMTISVSIPDICIDMVGAVLNVPMIRF SDVGDKVLFIENKFKMSDNYFTSHILMIPEMSSLKKILVRLGLEV
Specific function: Involved in restoring normal CheY-P levels following the addition of attractant by increasing the rate of CheY-P hydrolysis. Is only 6% as active as FliY, which indicates that CheC may function after addition of an attractant to cope with increased levels
COG id: COG1776
COG function: function code NT; Chemotaxis protein CheC, inhibitor of MCP methylation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CheC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007597 [H]
Pfam domain/function: PF04509 CheC [H]
EC number: NA
Molecular weight: Translated: 22658; Mature: 22658
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 7.3 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 7.3 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINYLELDDVHIDALREIGNIGSGNAITALASMINSNVEVLIPMVKILEYNEATNLLGGP CCCEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHCCCCC ENKVVCILLDMKGDINGMFMFLLDESITQLMLSSLFNKEEAFLDEIEAIEISAIKEIGNI CCCEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH MASSYVNAIASMLNMTISVSIPDICIDMVGAVLNVPMIRFSDVGDKVLFIENKFKMSDNY HHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCEECCCCE FTSHILMIPEMSSLKKILVRLGLEV EEEEEEECCCHHHHHHHHHHHCCCC >Mature Secondary Structure MINYLELDDVHIDALREIGNIGSGNAITALASMINSNVEVLIPMVKILEYNEATNLLGGP CCCEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHCCCCC ENKVVCILLDMKGDINGMFMFLLDESITQLMLSSLFNKEEAFLDEIEAIEISAIKEIGNI CCCEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH MASSYVNAIASMLNMTISVSIPDICIDMVGAVLNVPMIRFSDVGDKVLFIENKFKMSDNY HHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCEECCCCE FTSHILMIPEMSSLKKILVRLGLEV EEEEEEECCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2832368; 9384377 [H]